-
1
-
-
0034650256
-
Dynamic organization of chromosomal DNA in Escherichia coli
-
Niki H, Yamaichi Y, Hiraga S (2000) Dynamic organization of chromosomal DNA in Escherichia coli. Genes Dev 14:212-223. (Pubitemid 30070986)
-
(2000)
Genes and Development
, vol.14
, Issue.2
, pp. 212-223
-
-
Niki, H.1
Yamaichi, Y.2
Hiraga, S.3
-
2
-
-
3042548402
-
Rapid and sequential movement of individual chromosomal loci to specific subcellular locations during bacterial DNA replication
-
DOI 10.1073/pnas.0402606101
-
Viollier PH, et al. (2004) Rapid and sequential movement of individual chromosomal loci to specific subcellular locations during bacterial DNA replication. Proc Natl Acad Sci USA 101:9257-9262. (Pubitemid 38812862)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.25
, pp. 9257-9262
-
-
Viollier, P.H.1
Thanbichler, M.2
McGrath, P.T.3
West, L.4
Meewan, M.5
McAdams, H.H.6
Shapiro, L.7
-
3
-
-
33745603713
-
The two Escherichia coli chromosome arms locate to separate cell halves
-
DOI 10.1101/gad.388406
-
Wang X, Liu X, Possoz C, Sherratt DJ (2006) The two Escherichia coli chromosome arms locate to separate cell halves. Genes Dev 20:1727-1731. (Pubitemid 43992881)
-
(2006)
Genes and Development
, vol.20
, Issue.13
, pp. 1727-1731
-
-
Wang, X.1
Liu, X.2
Possoz, C.3
Sherratt, D.J.4
-
4
-
-
33749177128
-
The Escherichia coli chromosome is organized with the left and right chromosome arms in separate cell halves
-
DOI 10.1111/j.1365-2958.2006.05346.x
-
Nielsen HJ, Ottesen JR, Youngren B, Austin SJ, Hansen FG (2006) The Escherichia coli chromosome is organized with the left and right chromosome arms in separate cell halves. Mol Microbiol 62:331-338. (Pubitemid 44477225)
-
(2006)
Molecular Microbiology
, vol.62
, Issue.2
, pp. 331-338
-
-
Nielsen, H.J.1
Ottesen, J.R.2
Youngren, B.3
Austin, S.J.4
Hansen, F.G.5
-
5
-
-
77950455981
-
Strong intranucleoid interactions organize the Escherichia coli chromosome into a nucleoid filament
-
Wiggins PA, Cheveralls KC, Martin JS, Lintner R, Kondev J (2010) Strong intranucleoid interactions organize the Escherichia coli chromosome into a nucleoid filament. Proc Natl Acad Sci USA 107:4991-4995.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 4991-4995
-
-
Wiggins, P.A.1
Cheveralls, K.C.2
Martin, J.S.3
Lintner, R.4
Kondev, J.5
-
7
-
-
81255146230
-
The three-dimensional architecture of a bacterial genome and its alteration by genetic perturbation
-
Umbarger MA, et al. (2011) The three-dimensional architecture of a bacterial genome and its alteration by genetic perturbation. Mol Cell 44:252-264.
-
(2011)
Mol Cell
, vol.44
, pp. 252-264
-
-
Umbarger, M.A.1
-
8
-
-
0028882772
-
Autocatalytic gene expression occurs via transertion and membrane domain formation and underlies differentiation in bacteria: A model
-
Norris V, Madsen MS (1995) Autocatalytic gene expression occurs via transertion and membrane domain formation and underlies differentiation in bacteria: a model. J Mol Biol 253:739-748.
-
(1995)
J Mol Biol
, vol.253
, pp. 739-748
-
-
Norris, V.1
Madsen, M.S.2
-
9
-
-
0029093284
-
Structure and partitioning of bacterial DNA: Determined by a balance of compaction and expansion forces?
-
Woldringh CL, Jensen PR, Westerhoff HV (1995) Structure and partitioning of bacterial DNA: Determined by a balance of compaction and expansion forces? FEMS Microbiol Lett 131:235-242.
-
(1995)
FEMS Microbiol Lett
, vol.131
, pp. 235-242
-
-
Woldringh, C.L.1
Jensen, P.R.2
Westerhoff, H.V.3
-
10
-
-
0033030028
-
Transcription- and translation-dependent changes in membrane dynamics in bacteria: Testing the transertion model for domain formation
-
DOI 10.1046/j.1365-2958.1999.01426.x
-
Binenbaum Z, Parola AH, Zaritsky A, Fishov I (1999) Transcription- and translation-dependent changes in membrane dynamics in bacteria: Testing the transertion model for domain formation. Mol Microbiol 32:1173-1182. (Pubitemid 29286658)
-
(1999)
Molecular Microbiology
, vol.32
, Issue.6
, pp. 1173-1182
-
-
Binenbaum, Z.1
Parola, A.H.2
Zaritsky, A.3
Fishov, I.4
-
11
-
-
0036050398
-
The role of co-transcriptional translation and protein translocation (transertion) in bacterial chromosome segregation
-
Woldringh CL (2002) The role of co-transcriptional translation and protein translocation (transertion) in bacterial chromosome segregation. Mol Microbiol 45:17-29.
-
(2002)
Mol Microbiol
, vol.45
, pp. 17-29
-
-
Woldringh, C.L.1
-
12
-
-
35848962968
-
Toward a hyperstructure taxonomy
-
DOI 10.1146/annurev.micro.61.081606.103348
-
Norris V, et al. (2007) Toward a hyperstructure taxonomy. Annu Rev Microbiol 61: 309-329. (Pubitemid 350058211)
-
(2007)
Annual Review of Microbiology
, vol.61
, pp. 309-329
-
-
Norris, V.1
Den, B.T.2
Doi, R.H.3
Harshey, R.M.4
Janniere, L.5
Jimenez-Sanchez, A.6
Ding, J.J.7
Levin, P.A.8
Mileykovskaya, E.9
Minsky, A.10
Misevic, G.11
Ripoll, C.12
Saier Jr., M.13
Skarstad, K.14
Thellier, M.15
-
13
-
-
77955867901
-
Cellular polarity in prokaryotic organisms
-
Dworkin J (2009) Cellular polarity in prokaryotic organisms. Cold Spring Harb Perspect Biol 1:a003368.
-
(2009)
Cold Spring Harb Perspect Biol
, vol.1
-
-
Dworkin, J.1
-
17
-
-
0041853780
-
Spatial and temporal organization of replicating Escherichia coli chromosomes
-
DOI 10.1046/j.1365-2958.2003.03640.x
-
Lau IF, et al. (2003) Spatial and temporal organization of replicating Escherichia coli chromosomes. Mol Microbiol 49:731-743. (Pubitemid 36918692)
-
(2003)
Molecular Microbiology
, vol.49
, Issue.3
, pp. 731-743
-
-
Lau, I.F.1
Filipe, S.R.2
Soballe, B.3
Okstad, O.-A.4
Barre, F.-X.5
Sherratt, D.J.6
-
18
-
-
0021923607
-
Spacing of the -10 and -35 regions in the tac promoter. Effect on its in vivo activity
-
Brosius J, Erfle M, Storella J (1985) Spacing of the -10 and -35 regions in the tac promoter. Effect on its in vivo activity. J Biol Chem 260:3539-3541. (Pubitemid 15114354)
-
(1985)
Journal of Biological Chemistry
, vol.260
, Issue.6
, pp. 3539-3541
-
-
Brosius, J.1
Erfle, M.2
Storella, J.3
-
19
-
-
0028030082
-
Mechanisms underlying expression of Tn10 encoded tetracycline resistance
-
Hillen W, Berens C (1994) Mechanisms underlying expression of Tn10 encoded tetracycline resistance. Annu Rev Microbiol 48:345-369. (Pubitemid 24334101)
-
(1994)
Annual Review of Microbiology
, vol.48
, pp. 345-369
-
-
Hillen, W.1
Berens, C.2
-
20
-
-
0030461543
-
In vivo localization of DNA sequences and visualization of large-scale chromatin organization using lac operator/repressor recognition
-
DOI 10.1083/jcb.135.6.1685
-
Robinett CC, et al. (1996) In vivo localization of DNA sequences and visualization of large-scale chromatin organization using lac operator/repressor recognition. J Cell Biol 135:1685-1700. (Pubitemid 27036433)
-
(1996)
Journal of Cell Biology
, vol.135
, Issue.6 II
, pp. 1685-1700
-
-
Robinett, C.C.1
Straight, A.2
Li, G.3
Willhelm, C.4
Sudlow, G.5
Murray, A.6
Belmont, A.S.7
-
21
-
-
7744235343
-
Continuous control in bacterial regulatory circuits
-
DOI 10.1128/JB.186.22.7618-7625.2004
-
Batchelor E, Silhavy TJ, Goulian M (2004) Continuous control in bacterial regulatory circuits. J Bacteriol 186:7618-7625. (Pubitemid 39463727)
-
(2004)
Journal of Bacteriology
, vol.186
, Issue.22
, pp. 7618-7625
-
-
Batchelor, E.1
Silhavy, T.J.2
Goulian, M.3
-
23
-
-
50649104037
-
Protein translocation across the bacterial cytoplasmic membrane
-
Driessen AJ, Nouwen N (2008) Protein translocation across the bacterial cytoplasmic membrane. Annu Rev Biochem 77:643-667.
-
(2008)
Annu Rev Biochem
, vol.77
, pp. 643-667
-
-
Driessen, A.J.1
Nouwen, N.2
-
24
-
-
79952162080
-
Escherichia coli SRP, its protein subunit Ffh, and the Ffh M domain are able to selectively limit membrane protein expression when overexpressed
-
Yosef I, Bochkareva ES, Bibi E (2010) Escherichia coli SRP, its protein subunit Ffh, and the Ffh M domain are able to selectively limit membrane protein expression when overexpressed. MBio 1:e00020-10.
-
(2010)
MBio
, vol.1
-
-
Yosef, I.1
Bochkareva, E.S.2
Bibi, E.3
-
25
-
-
0037029094
-
Construction of the 'minimal' SRP that interacts with the translating ribosome but not with specific membrane receptors in Escherichia coli
-
DOI 10.1016/S0014-5793(02)02332-3, PII S0014579302023323
-
Avdeeva ON, et al. (2002) Construction of the 'minimal' SRP that interacts with the translating ribosome but not with specific membrane receptors in Escherichia coli. FEBS Lett 514:70-73. (Pubitemid 34251245)
-
(2002)
FEBS Letters
, vol.514
, Issue.1
, pp. 70-73
-
-
Avdeeva, O.N.1
Myasnikov, A.G.2
Sergiev, P.V.3
Bogdanov, A.A.4
Brimacombe, R.5
Dontsova, O.A.6
-
26
-
-
0023433855
-
Supercoiling of the DNA template during transcription
-
Liu LF, Wang JC (1987) Supercoiling of the DNA template during transcription. Proc Natl Acad Sci USA 84:7024-7027.
-
(1987)
Proc Natl Acad Sci USA
, vol.84
, pp. 7024-7027
-
-
Liu, L.F.1
Wang, J.C.2
-
27
-
-
44349174783
-
Extreme polyploidy in a large bacterium
-
DOI 10.1073/pnas.0707522105
-
Mendell JE, Clements KD, Choat JH, Angert ER (2008) Extreme polyploidy in a large bacterium. Proc Natl Acad Sci USA 105:6730-6734. (Pubitemid 351754575)
-
(2008)
Proceedings of the National Academy of Sciences of the United States of America
, vol.105
, Issue.18
, pp. 6730-6734
-
-
Mendell, J.E.1
Clements, K.D.2
Choat, J.H.3
Angert, E.R.4
-
29
-
-
77954242830
-
Spatial organization of the flow of genetic information in bacteria
-
Montero Llopis P, et al. (2010) Spatial organization of the flow of genetic information in bacteria. Nature 466:77-81.
-
(2010)
Nature
, vol.466
, pp. 77-81
-
-
Montero Llopis, P.1
-
30
-
-
28944434119
-
Real-time kinetics of gene activity in individual bacteria
-
DOI 10.1016/j.cell.2005.09.031, PII S0092867405010378
-
Golding I, Paulsson J, Zawilski SM, Cox EC (2005) Real-time kinetics of gene activity in individual bacteria. Cell 123:1025-1036. (Pubitemid 41785418)
-
(2005)
Cell
, vol.123
, Issue.6
, pp. 1025-1036
-
-
Golding, I.1
Paulsson, J.2
Zawilski, S.M.3
Cox, E.C.4
-
31
-
-
33645027986
-
Stochastic protein expression in individual cells at the single molecule level
-
Cai L, Friedman N, Xie XS (2006) Stochastic protein expression in individual cells at the single molecule level. Nature 440:358-362.
-
(2006)
Nature
, vol.440
, pp. 358-362
-
-
Cai, L.1
Friedman, N.2
Xie, X.S.3
-
33
-
-
44249103292
-
DNA dynamics vary according to macrodomain topography in the E. coli chromosome
-
DOI 10.1111/j.1365-2958.2008.06239.x
-
Espeli O, Mercier R, Boccard F (2008) DNA dynamics vary according to macrodomain topography in the E. coli chromosome. Mol Microbiol 68:1418-1427. (Pubitemid 351725253)
-
(2008)
Molecular Microbiology
, vol.68
, Issue.6
, pp. 1418-1427
-
-
Espeli, O.1
Mercier, R.2
Boccard, F.3
-
34
-
-
77953494844
-
Bacterial chromosomal loci move sub-diffusively through a viscoelastic cytoplasm
-
Weber SC, Spakowitz AJ, Theriot JA (2010) Bacterial chromosomal loci move sub-diffusively through a viscoelastic cytoplasm. Phys Rev Lett 104:238102.
-
(2010)
Phys Rev Lett
, vol.104
, pp. 238102
-
-
Weber, S.C.1
Spakowitz, A.J.2
Theriot, J.A.3
-
35
-
-
7244245362
-
Micromechanical analysis of the binding of DNA-bending proteins HMGB1, NHP6A, and HU reveals their ability to form highly stable DNA-protein complexes
-
DOI 10.1021/bi048428o
-
Skoko D, Wong B, Johnson RC, Marko JF (2004) Micromechanical analysis of the binding of DNA-bending proteins HMGB1, NHP6A, and HU reveals their ability to form highly stable DNA-protein complexes. Biochemistry 43:13867-13874. (Pubitemid 39431070)
-
(2004)
Biochemistry
, vol.43
, Issue.43
, pp. 13867-13874
-
-
Skoko, D.1
Wong, B.2
Johnson, R.C.3
Marko, J.F.4
-
36
-
-
2342454974
-
Dual architectural roles of HU: Formation of flexible hinges and rigid filaments
-
DOI 10.1073/pnas.0308230101
-
van Noort J, Verbrugge S, Goosen N, Dekker C, Dame RT (2004) Dual architectural roles of HU: Formation of flexible hinges and rigid filaments. Proc Natl Acad Sci USA 101:6969-6974. (Pubitemid 38596427)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.18
, pp. 6969-6974
-
-
Van Noort, J.1
Verbrugge, S.2
Goosen, N.3
Dekker, C.4
Dame, R.T.5
-
37
-
-
3342959174
-
Modulation of DNA conformations through the formation of alternative high-order HU-DNA complexes
-
DOI 10.1016/j.jmb.2004.06.023, PII S0022283604006916
-
Sagi D, Friedman N, Vorgias C, Oppenheim AB, Stavans J (2004) Modulation of DNA conformations through the formation of alternative high-order HU-DNA complexes. J Mol Biol 341:419-428. (Pubitemid 38987779)
-
(2004)
Journal of Molecular Biology
, vol.341
, Issue.2
, pp. 419-428
-
-
Sagi, D.1
Friedman, N.2
Vorgias, C.3
Oppenheim, A.B.4
Stavans, J.5
-
38
-
-
28844478332
-
Low-force DNA condensation and discontinuous high-force decondensation reveal a loop-stabilizing function of the protein Fis
-
Skoko D, Yan J, Johnson RC, Marko JF (2005) Low-force DNA condensation and discontinuous high-force decondensation reveal a loop-stabilizing function of the protein Fis. Phys Rev Lett 95:208101.
-
(2005)
Phys Rev Lett
, vol.95
, pp. 208101
-
-
Skoko, D.1
Yan, J.2
Johnson, R.C.3
Marko, J.F.4
-
39
-
-
79954634164
-
Scaling of linking and writhing numbers for spherically confined and topologically equilibrated flexible polymers
-
Marko JF (2011) Scaling of linking and writhing numbers for spherically confined and topologically equilibrated flexible polymers. J Stat Phys 142:1353-1370.
-
(2011)
J Stat Phys
, vol.142
, pp. 1353-1370
-
-
Marko, J.F.1
-
40
-
-
70349327690
-
Exploring the inner membrane proteome of Escherichia coli: Which proteins are eluding detection and why?
-
Bernsel A, Daley DO (2009) Exploring the inner membrane proteome of Escherichia coli: Which proteins are eluding detection and why? Trends Microbiol 17:444-449.
-
(2009)
Trends Microbiol
, vol.17
, pp. 444-449
-
-
Bernsel, A.1
Daley, D.O.2
-
41
-
-
79952367666
-
Imaging the bacterial nucleoid
-
eds Dame RT, Dorman CJ (Springer, New York)
-
MargolinW(2010) Imaging the bacterial nucleoid. Bacterial Chromatin, eds Dame RT, Dorman CJ (Springer, New York), pp 13-30.
-
(2010)
Bacterial Chromatin
, pp. 13-30
-
-
Margolin, W.1
-
42
-
-
0020045584
-
Co-translational insertion of envelope proteins: Theoretical considerations and implications
-
Vos-Scheperkeuter GH, Witholt B (1982) Co-translational insertion of envelope proteins: Theoretical consideration and implications. Ann Microbiol (Paris) 133A:129-138. (Pubitemid 12189087)
-
(1982)
Annales de Microbiologie
, vol.133 A
, Issue.1
, pp. 129-138
-
-
Vos-Scheperkeuter, G.H.1
Witholt, B.2
-
43
-
-
0024563782
-
Formation of supercoiling domains in plasmid pBR322
-
Lodge JK, Kazic T, Berg DE (1989) Formation of supercoiling domains in plasmid pBR322. J Bacteriol 171:2181-2187. (Pubitemid 19103989)
-
(1989)
Journal of Bacteriology
, vol.171
, Issue.4
, pp. 2181-2187
-
-
Lodge, J.K.1
Kazic, T.2
Berg, D.E.3
|