-
1
-
-
0016668191
-
Lipid composition of the golgi apparatus of rat kidney and liver in comparison with other subcellular organelles
-
Zambrano, F.; Fleischer, S.; Fleischer, B. Lipid composition of the golgi apparatus of rat kidney and liver in comparison with other subcellular organelles Biochim. Biophys. Acta, Lipids Lipid Metab. 1975, 380, 357-369
-
(1975)
Biochim. Biophys. Acta, Lipids Lipid Metab.
, vol.380
, pp. 357-369
-
-
Zambrano, F.1
Fleischer, S.2
Fleischer, B.3
-
2
-
-
0034698098
-
Absence of cardiolipin in the crd1 null mutant results in decreased mitochondrial membrane potential and reduced mitochondrial function
-
DOI 10.1074/jbc.M909868199
-
Jiang, F.; Ryan, M.; Schlame, M.; Zhao, M.; Gu, Z.; Klingenberg, M.; Pfanner, N.; Greenberg, M. Absence of cardiolipin in the crd1 null mutant results in decreased mitochondrial membrane potential and reduced mitochondrial function J. Biol. Chem. 2000, 275, 22387-22394 (Pubitemid 30621825)
-
(2000)
Journal of Biological Chemistry
, vol.275
, Issue.29
, pp. 22387-22394
-
-
Jiang, F.1
Ryan, M.T.2
Schlame, M.3
Zhao, M.4
Gu, Z.5
Klingenberg, M.6
Pfanner, N.7
Greenberg, M.L.8
-
3
-
-
0032407654
-
Minireview: Cardiolipins and mitochondrial proton-selective leakage
-
Hoch, F. L. Minireview: Cardiolipins and mitochondrial proton-selective leakage J. Bioenerg. Biomembr. 1998, 30, 511-532
-
(1998)
J. Bioenerg. Biomembr.
, vol.30
, pp. 511-532
-
-
Hoch, F.L.1
-
4
-
-
0020645392
-
Cytochrome P-450(scc)-phospholipid interactions: Evidence for a cardiolipin binding site and thermodynamics of enzyme interactions with cardiolipin, cholesterol, and adrenodoxin
-
Pember, S. O.; Powell, G. L.; Lambeth, J. D. Cytochrome P-450scc-phospholipid interactions. Evidence for a cardiolipin binding site and thermodynamics of enzyme interactions with cardiolipin, cholesterol, and adrenodoxin J. Biol. Chem. 1983, 258, 3198-3206 (Pubitemid 13130237)
-
(1983)
Journal of Biological Chemistry
, vol.258
, Issue.5
, pp. 3198-3206
-
-
Pember, S.O.1
Powell, G.L.2
Lambeth, J.D.3
-
5
-
-
0021895146
-
Cardiolipid is the membrane receptor for mitochondrial creatine phosphokinase
-
Müller, M.; Moser, R.; Cheneval, D.; Carafoli, E. Cardiolipin is the membrane receptor for mitochondrial creatine phosphokinase J. Biol. Chem. 1985, 260, 3839-3843 (Pubitemid 15110982)
-
(1985)
Journal of Biological Chemistry
, vol.260
, Issue.6
, pp. 3839-3843
-
-
Muller, M.1
Moser, R.2
Cheneval, D.3
Carafoli, E.4
-
6
-
-
0034057235
-
A quantitative approach to membrane binding of human ubiquitous mitochondrial creatine kinase using surface plasmon resonance
-
DOI 10.1023/A:1005576831968
-
Schlattner, U.; Wallimann, T. A Quantitative approach to membrane binding of human ubiquitous mitochondrial creatine kinase using surface plasmon resonance J. Bioenerg. Biomembr. 2000, 32, 123-131 (Pubitemid 30241265)
-
(2000)
Journal of Bioenergetics and Biomembranes
, vol.32
, Issue.1
, pp. 123-131
-
-
Schlattner, U.1
Wallimann, T.2
-
7
-
-
0024543916
-
Role of cardiolipin in the functioning of mitochondrial L-glycerol-3-phosphate dehydrogenase
-
DOI 10.1016/0006-291X(89)92414-5
-
Beleznai, Z.; Jancsik, V. Role of cardiolipin in the functioning of mitochonbrial l -glycerol-3-phosphate dehydrogenase Biochem. Biophys. Res. Commun. 1989, 159, 132-139 (Pubitemid 19087623)
-
(1989)
Biochemical and Biophysical Research Communications
, vol.159
, Issue.1
, pp. 132-139
-
-
Beleznai, Z.1
Jancsik, V.2
-
8
-
-
0022461266
-
An essential requirement of cardiolipin for mitochondrial carnitine acylcarnitine translocase activity
-
Noël, H.; Pande, S. V. An essential requirement of cardiolipin for mitochondrial carnitine acylcarnitine translocase activity Eur. J. Biochem. 1986, 155, 99-102
-
(1986)
Eur. J. Biochem.
, vol.155
, pp. 99-102
-
-
Noël, H.1
Pande, S.V.2
-
9
-
-
34247482333
-
Cardiolipin: Setting the beat of apoptosis
-
DOI 10.1007/s10495-007-0718-8, Special Issue on Mitochondria in Apoptosis
-
Gonzalvez, F.; Gottlieb, E. Cardiolipin: setting the beat of apoptosis Apoptosis 2007, 12, 877-885 (Pubitemid 46653287)
-
(2007)
Apoptosis
, vol.12
, Issue.5
, pp. 877-885
-
-
Gonzalvez, F.1
Gottlieb, E.2
-
10
-
-
0037174138
-
Cardiolipin: A proton trap for oxidative phosphorylation
-
DOI 10.1016/S0014-5793(02)03292-1, PII S0014579302032921
-
Haines, T. H.; Dencher, N. A. Cardiolipin: A proton trap for oxidative phosphorylation FEBS Lett. 2002, 528, 35-39 (Pubitemid 35257995)
-
(2002)
FEBS Letters
, vol.528
, Issue.1-3
, pp. 35-39
-
-
Haines, T.H.1
Dencher, N.A.2
-
11
-
-
0037022352
-
Cytochrome c release from mitochondria proceeds by a two-step process
-
DOI 10.1073/pnas.241655498
-
Ott, M.; Robertson, J. D.; Gogvadze, V.; Zhivotovsky, B.; Orrenius, S. Cytochrome c release from mitochondria proceeds by a two-step process Proc. Natl. Acad. Sci. U.S.A. 2002, 99, 1259-1263 (Pubitemid 34136480)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.3
, pp. 1259-1263
-
-
Ott, M.1
Robertson, J.D.2
Gogvadze, V.3
Zhivotovsky, B.4
Orrenius, S.5
-
12
-
-
0025013378
-
Mitochondrial contact sites. Lipid composition and dynamics
-
Ardail, D.; Privat, J. P.; Egret-Charlier, M.; Levrat, C.; Lerme, F.; Louisot, P. Mitochondrial contact sites. Lipid composition and dynamics J. Biol. Chem. 1990, 265, 18797-18802
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 18797-18802
-
-
Ardail, D.1
Privat, J.P.2
Egret-Charlier, M.3
Levrat, C.4
Lerme, F.5
Louisot, P.6
-
13
-
-
33751395400
-
A curvature-mediated mechanism for localization of lipids to bacterial poles
-
DOI 10.1371/journal.pcbi.0020151
-
Huang, K. C.; Mukhopadhyay, R.; Wingreen, N. S. A Curvature-Mediated Mechanism for Localization of Lipids to Bacterial Poles PLoS Comput. Biol. 2006, 2 e151 10.1371/journal.pcbi.0020151 (Pubitemid 44819922)
-
(2006)
PLoS Computational Biology
, vol.2
, Issue.11
, pp. 1357-1364
-
-
Huang, K.C.1
Mukhopadhyay, R.2
Wingreen, N.S.3
-
14
-
-
0033933520
-
Understanding the function of bacterial outer membrane channels by reconstitution into black lipid membranes
-
DOI 10.1016/S0301-4622(99)00153-2, PII S0301462299001532
-
Winterhalter, M.; Van Gelder, P.; Dumas, F. Understanding the function of bacterial outer membrane channels by reconstitution into black lipid membranes Biophys. Chem. 2000, 85, 153-167 (Pubitemid 30445259)
-
(2000)
Biophysical Chemistry
, vol.85
, Issue.2-3
, pp. 153-167
-
-
Van Gelder, P.1
Dumas, F.2
Winterhalter, M.3
-
15
-
-
70349551416
-
The physicochemical properties of cardiolipin bilayers and cardiolipin-containing lipid membranes
-
Lewis, R. N. A. H.; McElhaney, R. N. The physicochemical properties of cardiolipin bilayers and cardiolipin-containing lipid membranes Biochim. Biophys. Acta, Biomembr. 2009, 1788, 2069-2079
-
(2009)
Biochim. Biophys. Acta, Biomembr.
, vol.1788
, pp. 2069-2079
-
-
Lewis, R.N.A.H.1
McElhaney, R.N.2
-
16
-
-
0033592997
-
Structural details of an interaction between cardiolipin and an integral membrane protein
-
DOI 10.1073/pnas.96.26.14706
-
McAuley, K. E.; Fyfe, P. K.; Ridge, J. P.; Isaacs, N. W.; Cogdell, R. J.; Jones, M. R. Structural details of an interaction between cardiolipin and an integral membrane protein Proc. Natl. Acad. Sci. U.S.A. 1999, 96, 14706-14711 (Pubitemid 30019704)
-
(1999)
Proceedings of the National Academy of Sciences of the United States of America
, vol.96
, Issue.26
, pp. 14706-14711
-
-
McAuley, K.E.1
Fyfe, P.K.2
Ridge, J.P.3
Isaacs, N.W.4
Cogdell, R.J.5
Jones, M.R.6
-
17
-
-
0034834616
-
Individual interactions influence the crystalline order for membrane proteins
-
DOI 10.1107/S090744490101109X
-
Camara-Artigas, A.; Magee, C. L.; Williams, J. C.; Allen, J. P. Individual interactions influence the crystalline order for membrane proteins Acta Crystallogr., Sect. D: Biol. Crystallogr. 2001, 57, 1281-1286 (Pubitemid 32885725)
-
(2001)
Acta Crystallographica Section D: Biological Crystallography
, vol.57
, Issue.9
, pp. 1281-1286
-
-
Camara-Artigas, A.1
Magee, C.L.2
Williams, J.C.3
Allen, J.P.4
-
18
-
-
33947381395
-
Brominated lipids identify lipid binding sites on the surface of the reaction center from Rhodobacter sphaeroides
-
DOI 10.1021/bi062154i
-
Roszak, A. W.; Gardiner, A. T.; Isaacs, N. W.; Cogdell, R. J. Brominated lipids identify lipid binding sites on the surface of the reaction center from Rhodobacter sphaeroides Biochemistry 2007, 46, 2909-2916 (Pubitemid 46449115)
-
(2007)
Biochemistry
, vol.46
, Issue.11
, pp. 2909-2916
-
-
Roszak, A.W.1
Gardiner, A.T.2
Isaacs, N.W.3
Cogdell, R.J.4
-
19
-
-
9144237033
-
The low-spin heme of cytochrome c oxidase as the driving element of the proton-pumping process
-
DOI 10.1073/pnas.2635097100
-
Tsukihara, T.; Shimokata, K.; Katayama, Y.; Shimada, H.; Muramoto, K.; Aoyama, H.; Mochizuki, M.; Shinzawa-Itoh, K.; Yamashita, E.; Yao, M.; Ishimura, Y.; Yoshikawa, S. The low-spin heme of cytochrome c oxidase as the driving element of the proton-pumping process Proc. Natl. Acad. Sci. U.S.A. 2003, 100, 15304-15309 (Pubitemid 38020984)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.26
, pp. 15304-15309
-
-
Tsukihara, T.1
Shimokata, K.2
Katayama, Y.3
Shimada, H.4
Muramoto, K.5
Aoyama, H.6
Mochizuki, M.7
Shinzawa-Itoh, K.8
Yamashita, E.9
Yao, M.10
Ishimura, Y.11
Yoshikawa, S.12
-
20
-
-
58149181485
-
Lipids on the move: Simulations of membrane pores, domains, stalks and curves
-
Marrink, S. J.; de Vries, A. H.; Tieleman, D. P. Lipids on the move: Simulations of membrane pores, domains, stalks and curves Biochim. Biophys. Acta, Biomembr. 2009, 1788, 149-168
-
(2009)
Biochim. Biophys. Acta, Biomembr.
, vol.1788
, pp. 149-168
-
-
Marrink, S.J.1
De Vries, A.H.2
Tieleman, D.P.3
-
22
-
-
34547279303
-
Polymorphic phase behavior of cardiolipin derivatives studied by coarse-grained molecular dynamics
-
DOI 10.1021/jp071954f
-
Dahlberg, M. Polymorphic phase behavior of cardiolipin derivatives studied by coarse-grained molecular dynamics J. Phys. Chem. B 2007, 111, 7194-7200 (Pubitemid 47152505)
-
(2007)
Journal of Physical Chemistry B
, vol.111
, Issue.25
, pp. 7194-7200
-
-
Dahlberg, M.1
-
23
-
-
53049083198
-
Molecular dynamics simulations of cardiolipin bilayers
-
Dahlberg, M.; Maliniak, A. Molecular dynamics simulations of cardiolipin bilayers J. Phys. Chem. B 2008, 112, 11655-11663
-
(2008)
J. Phys. Chem. B
, vol.112
, pp. 11655-11663
-
-
Dahlberg, M.1
Maliniak, A.2
-
24
-
-
0030999097
-
Molecular dynamics simulations of a fluid bilayer of dipalmitoylphosphatidylcholine at full hydration, constant pressure, and constant temperature
-
Berger, O.; Edholm, O.; J hnig, F. Molecular dynamics simulations of a fluid bilayer of dipalmitoylphosphatidylcholine at full hydration, constant pressure, and constant temperature Biophys. J. 1997, 72, 2002-2013 (Pubitemid 27184429)
-
(1997)
Biophysical Journal
, vol.72
, Issue.5
, pp. 2002-2013
-
-
Berger, O.1
Edholm, O.2
Jahnig, F.3
-
25
-
-
65249133096
-
Role of cardiolipins in the inner mitochondrial membrane: Insight gained through atom-scale simulations
-
Róg, T.; Martinez-Seara, H.; Munck, N.; Oresic, M.; Karttunen, M.; Vattulainen, I. Role of cardiolipins in the inner mitochondrial membrane: insight gained through atom-scale simulations J. Phys. Chem. B 2009, 113, 3413-3422
-
(2009)
J. Phys. Chem. B
, vol.113
, pp. 3413-3422
-
-
Róg, T.1
Martinez-Seara, H.2
Munck, N.3
Oresic, M.4
Karttunen, M.5
Vattulainen, I.6
-
26
-
-
77953377650
-
Update of the CHARMM all-atom additive force field for lipids: Validation on six lipid types
-
Klauda, J. B.; Venable, R. M.; Freites, J. A.; O'Connor, J. W.; Tobias, D. J.; Mondragon-Ramirez, C.; Vorobyov, I.; MacKerell, A. D.; Pastor, R. W. Update of the CHARMM all-atom additive force field for lipids: Validation on six lipid types J. Phys. Chem. B 2010, 114, 7830-7843
-
(2010)
J. Phys. Chem. B
, vol.114
, pp. 7830-7843
-
-
Klauda, J.B.1
Venable, R.M.2
Freites, J.A.3
O'Connor, J.W.4
Tobias, D.J.5
Mondragon-Ramirez, C.6
Vorobyov, I.7
MacKerell, A.D.8
Pastor, R.W.9
-
27
-
-
67650066543
-
Models for phosphatidylglycerol lipids put to a structural test
-
Hénin, J.; Shinoda, W.; Klein, M. L. Models for phosphatidylglycerol lipids put to a structural test J. Phys. Chem. B 2009, 113, 6958-6963
-
(2009)
J. Phys. Chem. B
, vol.113
, pp. 6958-6963
-
-
Hénin, J.1
Shinoda, W.2
Klein, M.L.3
-
28
-
-
48549102871
-
United-atom acyl chains for CHARMM phospholipids
-
Hénin, J.; Shinoda, W.; Klein, M. L. United-atom acyl chains for CHARMM phospholipids J. Phys. Chem. B 2008, 112, 7008-7015
-
(2008)
J. Phys. Chem. B
, vol.112
, pp. 7008-7015
-
-
Hénin, J.1
Shinoda, W.2
Klein, M.L.3
-
29
-
-
17444403286
-
-
release 7.0; Hypercube, Inc. Gainesville, FL
-
Hyperchem, release 7.0;, Hypercube, Inc.: Gainesville, FL, 2002.
-
(2002)
Hyperchem
-
-
-
30
-
-
84988129057
-
Optimization of parameters for semiempirical methods I. Method
-
Stewart, J. J. P. Optimization of parameters for semiempirical methods I. Method J. Comput. Chem. 1989, 10, 209-220
-
(1989)
J. Comput. Chem.
, vol.10
, pp. 209-220
-
-
Stewart, J.J.P.1
-
31
-
-
0029878720
-
VMD: Visual molecular dynamics
-
DOI 10.1016/0263-7855(96)00018-5
-
Humphrey, W.; Dalke, A.; Schulten, K. VMD: Visual molecular dynamics J. Mol. Graphics 1996, 14, 33-38 (Pubitemid 26152973)
-
(1996)
Journal of Molecular Graphics
, vol.14
, Issue.1
, pp. 33-38
-
-
Humphrey, W.1
Dalke, A.2
Schulten, K.3
-
32
-
-
27344436659
-
Scalable molecular dynamics with NAMD
-
DOI 10.1002/jcc.20289
-
Phillips, J.; Braun, R.; Wang, W.; Gumbart, J.; Tajkhorshid, E.; Villa, E.; Chipot, C.; Skeel, R.; Kale, L.; Schulten, K. Scalable molecular dynamics with NAMD J. Comput. Chem. 2005, 26, 1781-1802 (Pubitemid 43078511)
-
(2005)
Journal of Computational Chemistry
, vol.26
, Issue.16
, pp. 1781-1802
-
-
Phillips, J.C.1
Braun, R.2
Wang, W.3
Gumbart, J.4
Tajkhorshid, E.5
Villa, E.6
Chipot, C.7
Skeel, R.D.8
Kale, L.9
Schulten, K.10
-
33
-
-
36449007836
-
Constant-pressure molecular-dynamics simulation-The Langevin piston method
-
Feller, S. E.; Zhang, Y. H.; Pastor, R. W.; Brooks, B. R. Constant-pressure molecular-dynamics simulation-The Langevin piston method J. Chem. Phys. 1995, 103, 4613-4621
-
(1995)
J. Chem. Phys.
, vol.103
, pp. 4613-4621
-
-
Feller, S.E.1
Zhang, Y.H.2
Pastor, R.W.3
Brooks, B.R.4
-
34
-
-
36449009053
-
Molecular dynamics algorithm for multiple time scales: Systems with disparate masses
-
Tuckerman, M. E.; Berne, B. J.; Rossi, A. Molecular dynamics algorithm for multiple time scales: Systems with disparate masses J. Chem. Phys. 1991, 94, 1465-1469
-
(1991)
J. Chem. Phys.
, vol.94
, pp. 1465-1469
-
-
Tuckerman, M.E.1
Berne, B.J.2
Rossi, A.3
-
35
-
-
0004016501
-
Comparison of simple potential functions for simulating liquid water
-
Jorgensen, W.; Chandrasekhar, J. M.; Jd, I. RW; Klein, M. L. Comparison of simple potential functions for simulating liquid water J. Chem. Phys. 1983, 79, 926-935
-
(1983)
J. Chem. Phys.
, vol.79
, pp. 926-935
-
-
Jorgensen, W.1
Chandrasekhar, J.M.2
Jd, I.R.3
Klein, M.L.4
-
36
-
-
0041784950
-
All-atom empirical potential for molecular modeling and dynamics studies of proteins
-
MacKerell, A. D.; Bashford, D.; Bellott; Dunbrack, R. L.; Evanseck, J. D.; Field, M. J.; Fischer, S.; Gao, J.; Guo, H.; Ha, S.; Joseph-McCarthy, D.; Kuchnir, L.; Kuczera, K.; Lau, F. T. K.; Mattos, C.; Michnick, S.; Ngo, T.; Nguyen, D. T.; Prodhom, B.; Reiher, W. E.; Roux, B.; Schlenkrich, M.; Smith, J. C.; Stote, R.; Straub, J.; Watanabe, M.; Wirkiewicz-Kuczera, J.; Yin, D.; Karplus, M. All-atom empirical potential for molecular modeling and dynamics studies of proteins J. Phys. Chem. B 1998, 102, 3586-3616 (Pubitemid 128576688)
-
(1998)
Journal of Physical Chemistry B
, vol.102
, Issue.18
, pp. 3586-3616
-
-
MacKerell Jr., A.D.1
Bashford, D.2
Bellott, M.3
Dunbrack Jr., R.L.4
Evanseck, J.D.5
Field, M.J.6
Fischer, S.7
Gao, J.8
Guo, H.9
Ha, S.10
Joseph-McCarthy, D.11
Kuchnir, L.12
Kuczera, K.13
Lau, F.T.K.14
Mattos, C.15
Michnick, S.16
Ngo, T.17
Nguyen, D.T.18
Prodhom, B.19
Reiher III, W.E.20
Roux, B.21
Schlenkrich, M.22
Smith, J.C.23
Stote, R.24
Straub, J.25
Watanabe, M.26
Wiorkiewicz-Kuczera, J.27
Yin, D.28
Karplus, M.29
more..
-
37
-
-
22244445788
-
Imaging α-hemolysin with molecular dynamics: Ionic conductance, osmotic permeability, and the electrostatic potential map
-
DOI 10.1529/biophysj.104.058727
-
Aksimentiev, A.; Schulten, K. Imaging [alpha]-hemolysin with molecular dynamics: ionic conductance, osmotic permeability, and the electrostatic potential map Biophys. J. 2005, 88, 3745-3761 (Pubitemid 40991090)
-
(2005)
Biophysical Journal
, vol.88
, Issue.6
, pp. 3745-3761
-
-
Aksimentiev, A.1
Schulten, K.2
-
38
-
-
0000254361
-
A Voronoi analysis of lipid area fluctuation in a bilayer
-
DOI 10.1063/1.476702, PII S0021960698502280
-
Okazaki, S.; Shinoda, W. A Voronoi analysis of lipid area fluctuation in a bilayer J. Chem. Phys. 1998, 109, 1517-1521 (Pubitemid 128678570)
-
(1998)
Journal of Chemical Physics
, vol.109
, Issue.4
, pp. 1517-1521
-
-
Shinoda, W.1
Okazaki, S.2
-
39
-
-
77957936649
-
Simulating POPC and POPC/POPG bilayers: Conserved packing and altered surface reactivity
-
Janosi, L.; Gorfe, A. A. Simulating POPC and POPC/POPG bilayers: conserved packing and altered surface reactivity J. Chem. Theory Comput. 2010, 6, 3267-3273
-
(2010)
J. Chem. Theory Comput.
, vol.6
, pp. 3267-3273
-
-
Janosi, L.1
Gorfe, A.A.2
-
40
-
-
79960182810
-
Development of the CHARMM force field for lipids
-
Pastor, R. W.; MacKerell, A. D. Development of the CHARMM force field for lipids J. Phys. Chem. Lett. 2011, 2, 1526-1532
-
(2011)
J. Phys. Chem. Lett.
, vol.2
, pp. 1526-1532
-
-
Pastor, R.W.1
MacKerell, A.D.2
-
41
-
-
0020797454
-
Role of the cardiolipin-adriamycin complex in mitochondrial toxicity
-
Goormaghtigh, E.; Ruysschaert, J. M. Role of the cardiolipin-adriamycin complex in mitochondrial toxicity Colloids Surf. 1984, 10, 239-247
-
(1984)
Colloids Surf.
, vol.10
, pp. 239-247
-
-
Goormaghtigh, E.1
Ruysschaert, J.M.2
-
42
-
-
0025193951
-
Structure of the adriamycin-cardiolipid complex. Role in mitochondrial toxicity
-
DOI 10.1016/0301-4622(90)80012-V
-
Goormaghtigh, E.; Huart, P.; Praet, M.; Brasseur, R.; Ruysschaert, J. M. Structure of the adriamycin-cardiolipin complex: Role in mitochondrial toxicity Biophys. Chem. 1990, 35, 247-257 (Pubitemid 20185442)
-
(1990)
Biophysical Chemistry
, vol.35
, Issue.2-3
, pp. 247-257
-
-
Goormaghtigh, E.1
Huart, P.2
Praet, M.3
Brasseur, R.4
Ruysschaert, J.-M.5
-
43
-
-
33846846337
-
+ counterions
-
DOI 10.1529/biophysj.106.086272
-
Zhao, W.; Róg, T.; Gurtovenko, A.; Vattulainen, I.; Karttunen, M. Atomic-scale structure and electrostatics of anionic palmitoyloleoylphosphatidylglycerol lipid bilayers with Na+ counterions Biophys. J. 2007, 92, 1114-1124 (Pubitemid 46203173)
-
(2007)
Biophysical Journal
, vol.92
, Issue.4
, pp. 1114-1124
-
-
Zhao, W.1
Rog, T.2
Gurtovenko, A.A.3
Vattulainen, I.4
Karttunen, M.5
-
44
-
-
29344464343
-
Molecular dynamics simulation of a phosphatidylglycerol membrane
-
DOI 10.1016/j.febslet.2005.11.064, PII S0014579305014365
-
Elmore, D. E. Molecular dynamics simulation of a phosphatidylglycerol membrane FEBS Lett. 2006, 580, 144-148 (Pubitemid 43005327)
-
(2006)
FEBS Letters
, vol.580
, Issue.1
, pp. 144-148
-
-
Elmore, D.E.1
-
45
-
-
1542289943
-
Structure and Fluctuations of Charged Phosphatidylserine Bilayers in the Absence of Salt
-
Petrache, H. I.; Tristram-Nagle, S.; Gawrisch, K.; Harries, D.; Parsegian, V. A.; Nagle, J. F. Structure and fluctuations of charged phosphatidylserine bilayers in the absence of salt Biophys. J. 2004, 86, 1574-1586 (Pubitemid 38304847)
-
(2004)
Biophysical Journal
, vol.86
, Issue.3
, pp. 1574-1586
-
-
Petrache, H.I.1
Tristram-Nagle, S.2
Gawrisch, K.3
Harries, D.4
Parsegian, V.A.5
Nagle, J.F.6
-
46
-
-
67949120080
-
United atom lipid parameters for combination with the optimized potentials for liquid simulations all-atom force field
-
Ulmschneider, J. P.; Ulmschneider, M. B. United atom lipid parameters for combination with the optimized potentials for liquid simulations all-atom force field J. Chem. Theory Comput. 2009, 5, 1803-1813
-
(2009)
J. Chem. Theory Comput.
, vol.5
, pp. 1803-1813
-
-
Ulmschneider, J.P.1
Ulmschneider, M.B.2
-
47
-
-
45849102071
-
Gas conduction of lipid bilayers and membrane channels
-
Feller, S. Current Topics in Membranes; Elsevier
-
Wang, Y.; Ohkubo, Y.; Tajkhorshid, E. Gas conduction of lipid bilayers and membrane channels. In Computational Modeling of Membrane Bilayers; Feller, S., Ed.; Current Topics in Membranes; Elsevier, 2008; Vol. 60, pp 343-367.
-
(2008)
Computational Modeling of Membrane Bilayers
, vol.60
, pp. 343-367
-
-
Wang, Y.1
Ohkubo, Y.2
Tajkhorshid, E.3
-
48
-
-
34247579683
-
Calorimetric, X-ray diffraction, and spectroscopic studies of the thermotropic phase behavior and organization of tetramyristoyl cardiolipin membranes
-
DOI 10.1529/biophysj.106.094003
-
Lewis, R. N. A. H.; Zweytick, D.; Pabst, G.; Lohner, K.; McElhaney, R. N. Calorimetric, X-ray diffraction, and spectroscopic studies of the thermotropic phase behavior and organization of tetramyristoyl cardiolipin membranes Biophys. J. 2007, 92, 3166-3177 (Pubitemid 46684577)
-
(2007)
Biophysical Journal
, vol.92
, Issue.9
, pp. 3166-3177
-
-
Lewis, R.N.A.H.1
Zweytick, D.2
Pabst, G.3
Lohner, K.4
McElhaney, R.N.5
-
49
-
-
1642485164
-
Coarse grained model for semiquantitative lipid simulations
-
Marrink, S. J.; de Vries, A. H.; Mark, A. E. Coarse grained model for semiquantitative lipid simulations J. Phys. Chem. B 2004, 108, 750-760
-
(2004)
J. Phys. Chem. B
, vol.108
, pp. 750-760
-
-
Marrink, S.J.1
De Vries, A.H.2
Mark, A.E.3
-
50
-
-
77950226278
-
Quantum chemical modeling of the cardiolipin headgroup
-
Dahlberg, M.; Marini, A.; Mennucci, B.; Maliniak, A. Quantum chemical modeling of the cardiolipin headgroup J. Phys. Chem. A 2010, 114, 4375-4387
-
(2010)
J. Phys. Chem. A
, vol.114
, pp. 4375-4387
-
-
Dahlberg, M.1
Marini, A.2
Mennucci, B.3
Maliniak, A.4
-
51
-
-
71549166641
-
Mitochondrial membranes with mono- and divalent salt: Changes induced by salt ions on structure and dynamics
-
Pöyry, S.; Róg, T.; Karttunen, M.; Vattulainen, I. Mitochondrial membranes with mono- and divalent salt: Changes induced by salt ions on structure and dynamics J. Phys. Chem. B 2009, 113, 15513-15521
-
(2009)
J. Phys. Chem. B
, vol.113
, pp. 15513-15521
-
-
Pöyry, S.1
Róg, T.2
Karttunen, M.3
Vattulainen, I.4
-
52
-
-
0035449971
-
Optimized particle-mesh Ewald/multiple-time step integration for molecular dynamics simulations
-
Batcho, P. F.; Case, D. A.; Schlick, T. Optimized particle-mesh Ewald/multiple-time step integration for molecular dynamics simulations J. Chem. Phys. 2001, 115, 4003
-
(2001)
J. Chem. Phys.
, vol.115
, pp. 4003
-
-
Batcho, P.F.1
Case, D.A.2
Schlick, T.3
-
53
-
-
44449167975
-
Role of phosphatidylglycerols in the stability of bacterial membranes
-
Zhao, W.; Róg, T.; Gurtovenko, A.; Vattulainen, I.; Karttunen, M. Role of phosphatidylglycerols in the stability of bacterial membranes Biochimie 2008, 90, 930-938
-
(2008)
Biochimie
, vol.90
, pp. 930-938
-
-
Zhao, W.1
Róg, T.2
Gurtovenko, A.3
Vattulainen, I.4
Karttunen, M.5
-
54
-
-
30344482264
-
A polarizable model of water for molecular dynamics simulations of biomolecules
-
DOI 10.1016/j.cplett.2005.10.135, PII S0009261405017069
-
Lamoureux, G.; Harder, E.; Vorobyov, I. V.; Roux, B.; Mackerell, A. D., Jr. A polarizable model of water for molecular dynamics simulations of biomolecules Chem. Phys. Lett. 2006, 418, 245-249 (Pubitemid 43063383)
-
(2006)
Chemical Physics Letters
, vol.418
, Issue.1-3
, pp. 245-249
-
-
Lamoureux, G.1
Harder, E.2
Vorobyov, I.V.3
Roux, B.4
MacKerell Jr., A.D.5
-
55
-
-
77951142226
-
Accurate calculation of hydration free energies using pair-specific Lennard-Jones parameters in the CHARMM drude polarizable force field
-
Baker, C. M.; Lopes, P. E. M.; Zhu, X.; Roux, B.; Mackerell, A. D., Jr. Accurate calculation of hydration free energies using pair-specific Lennard-Jones parameters in the CHARMM drude polarizable force field J. Chem. Theory Comput. 2010, 6, 1181-1198
-
(2010)
J. Chem. Theory Comput.
, vol.6
, pp. 1181-1198
-
-
Baker, C.M.1
Lopes, P.E.M.2
Zhu, X.3
Roux, B.4
Mackerell Jr., A.D.5
-
56
-
-
0041843662
-
Low dielectric permittivity of water at the membrane interface: Effect on the energy coupling mechanism in biological membranes
-
Cherepanov, D. A.; Feniouk, B. A.; Junge, W.; Mulkidjanian, A. Y. Low dielectric permittivity of water at the membrane interface: effect on the energy coupling mechanism in biological membranes Biophys. J. 2003, 85, 1307-1316 (Pubitemid 36909690)
-
(2003)
Biophysical Journal
, vol.85
, Issue.2
, pp. 1307-1316
-
-
Cherepanov, D.A.1
Feniouk, B.A.2
Junge, W.3
Mulkidjanian, A.Y.4
-
57
-
-
24144488293
-
Areas of molecules in membranes consisting of mixtures
-
DOI 10.1529/biophysj.105.064329
-
Edholm, O.; Nagle, J. F. Areas of molecules in membranes consisting of mixtures Biophys. J. 2005, 89, 1827-1832 (Pubitemid 41233537)
-
(2005)
Biophysical Journal
, vol.89
, Issue.3
, pp. 1827-1832
-
-
Edholm, O.1
Nagle, J.F.2
-
58
-
-
58149190056
-
Lipid domains in bacterial membranes and the action of antimicrobial agents
-
Epand, R. M.; Epand, R. F. Lipid domains in bacterial membranes and the action of antimicrobial agents Biochim. Biophys. Acta 2009, 1788, 289-294
-
(2009)
Biochim. Biophys. Acta
, vol.1788
, pp. 289-294
-
-
Epand, R.M.1
Epand, R.F.2
-
59
-
-
81755171432
-
Molecular convergence of bacterial and eukaryotic surface order
-
Kaiser, H.-J.; Surma, M. A.; Mayer, F.; Levental, I.; Grzybek, M.; Klemm, R. W.; Da Cruz, S.; Meisinger, C.; Muller, V.; Simons, K.; Lingwood, D. Molecular convergence of bacterial and eukaryotic surface order J. Biol. Chem. 2011, 286, 40631-40637
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 40631-40637
-
-
Kaiser, H.-J.1
Surma, M.A.2
Mayer, F.3
Levental, I.4
Grzybek, M.5
Klemm, R.W.6
Da Cruz, S.7
Meisinger, C.8
Muller, V.9
Simons, K.10
Lingwood, D.11
-
60
-
-
0026603840
-
Cardiolipins and biomembrane function
-
Hoch, F. L. Cardiolipins and biomembrane function Biochim. Biophys. Acta 1992, 1113, 71-133
-
(1992)
Biochim. Biophys. Acta
, vol.1113
, pp. 71-133
-
-
Hoch, F.L.1
-
61
-
-
79959727395
-
Cardiolipin affects the supramolecular organization of ATP synthase in mitochondria
-
Acehan, D.; Malhotra, A.; Xu, Y.; Ren, M.; Stokes, D. L.; Schlame, M. Cardiolipin affects the supramolecular organization of ATP synthase in mitochondria Biophys. J. 2011, 100, 2184-2192
-
(2011)
Biophys. J.
, vol.100
, pp. 2184-2192
-
-
Acehan, D.1
Malhotra, A.2
Xu, Y.3
Ren, M.4
Stokes, D.L.5
Schlame, M.6
-
62
-
-
79959770281
-
Determination of electron density profiles and area from simulations of undulating membranes
-
Sachs, J. N.; Braun, A. R.; Brandt, E. G.; Edholm, O.; Nagle, J. F. Determination of electron density profiles and area from simulations of undulating membranes Biophys. J. 2011, 100, 2112-2120
-
(2011)
Biophys. J.
, vol.100
, pp. 2112-2120
-
-
Sachs, J.N.1
Braun, A.R.2
Brandt, E.G.3
Edholm, O.4
Nagle, J.F.5
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