메뉴 건너뛰기




Volumn 426, Issue , 2012, Pages 430-435

Interactions between dissolved natural organic matter and adsorbed DNA and their effect on natural transformation of Azotobacter vinelandii

Author keywords

Adsorbed extracellular DNA; Azotobacter vinelandii; Environmental chemistry; Natural gene transformation; Natural organic matter

Indexed keywords

AZOTOBACTER VINELANDII; ENVIRONMENTAL CHEMISTRY; EXTRACELLULAR; NATURAL GENES; NATURAL ORGANIC MATTERS;

EID: 84860650859     PISSN: 00489697     EISSN: 18791026     Source Type: Journal    
DOI: 10.1016/j.scitotenv.2012.03.063     Document Type: Article
Times cited : (11)

References (46)
  • 2
    • 65549165914 scopus 로고    scopus 로고
    • What antimicrobial resistance has taught us about horizontal gene transfer
    • Humana Press, New York, NY, M.B. Gogarten, J.P. Gogarten, L.C. Olendzenski (Eds.)
    • Barlow M. What antimicrobial resistance has taught us about horizontal gene transfer. Horizontal Gene Transfer: Genomes in Flux 2009, 532:397-411. Humana Press, New York, NY. M.B. Gogarten, J.P. Gogarten, L.C. Olendzenski (Eds.).
    • (2009) Horizontal Gene Transfer: Genomes in Flux , vol.532 , pp. 397-411
    • Barlow, M.1
  • 3
    • 0021893440 scopus 로고
    • 2+-induced permeabilization of the Escherichia coli outer membrane: comparison of transformation and reconstitution of binding-protein-dependent transport
    • 2+-induced permeabilization of the Escherichia coli outer membrane: comparison of transformation and reconstitution of binding-protein-dependent transport. J Bacteriol 1985, 163:61.
    • (1985) J Bacteriol , vol.163 , pp. 61
    • Bukau, B.1    Brass, J.M.2    Boos, W.3
  • 4
    • 33646343744 scopus 로고    scopus 로고
    • Interactions of DNA with clay minerals and soil colloidal particles and protection against degradation by DNase
    • Cai P., Huang Q.Y., Zhang X.W. Interactions of DNA with clay minerals and soil colloidal particles and protection against degradation by DNase. Environ Sci Technol 2006, 40:2971-2976.
    • (2006) Environ Sci Technol , vol.40 , pp. 2971-2976
    • Cai, P.1    Huang, Q.Y.2    Zhang, X.W.3
  • 5
    • 3042596928 scopus 로고    scopus 로고
    • DNA uptake during bacterial transformation
    • Chen I., Dubnau D. DNA uptake during bacterial transformation. Nat Rev Microbiol 2004, 2:241-249.
    • (2004) Nat Rev Microbiol , vol.2 , pp. 241-249
    • Chen, I.1    Dubnau, D.2
  • 6
    • 28544449319 scopus 로고    scopus 로고
    • The ins and outs of DNA transfer in bacteria
    • Chen I., Christie P.J., Dubnau D. The ins and outs of DNA transfer in bacteria. Science 2005, 310:1456.
    • (2005) Science , vol.310 , pp. 1456
    • Chen, I.1    Christie, P.J.2    Dubnau, D.3
  • 7
    • 0022522139 scopus 로고
    • Molecular weight distribution, carboxylic acidity, and humic substances content of aquatic organic matter: implications for removal during water treatment
    • Collins M., Amy G., Steelink C. Molecular weight distribution, carboxylic acidity, and humic substances content of aquatic organic matter: implications for removal during water treatment. Environ Sci Technol 1986, 20:1028-1032.
    • (1986) Environ Sci Technol , vol.20 , pp. 1028-1032
    • Collins, M.1    Amy, G.2    Steelink, C.3
  • 8
    • 33746832928 scopus 로고    scopus 로고
    • Chronic aquatic environmental risks from exposure to human pharmaceuticals
    • Crane M., Watts C., Boucard T. Chronic aquatic environmental risks from exposure to human pharmaceuticals. Sci Total Environ 2006, 367:23-41.
    • (2006) Sci Total Environ , vol.367 , pp. 23-41
    • Crane, M.1    Watts, C.2    Boucard, T.3
  • 9
    • 0032145163 scopus 로고    scopus 로고
    • Binding of DNA on humic acids: effect on transformation of Bacillus subtilis and resistance to DNase
    • Crecchio C., Stotzky G. Binding of DNA on humic acids: effect on transformation of Bacillus subtilis and resistance to DNase. Soil Biol Biochem 1998, 30:1061-1067.
    • (1998) Soil Biol Biochem , vol.30 , pp. 1061-1067
    • Crecchio, C.1    Stotzky, G.2
  • 10
    • 18644374776 scopus 로고    scopus 로고
    • Binding of DNA from Bacillus subtilis on montmorillonite-humic acids-aluminum or iron hydroxypolymers: effects on transformation and protection against DNase
    • Crecchio C., Ruggiero P., Curci M., Colombo C., Palumbo G., Stotzky G. Binding of DNA from Bacillus subtilis on montmorillonite-humic acids-aluminum or iron hydroxypolymers: effects on transformation and protection against DNase. Soil Sci Soc Am J 2005, 69:834-841.
    • (2005) Soil Sci Soc Am J , vol.69 , pp. 834-841
    • Crecchio, C.1    Ruggiero, P.2    Curci, M.3    Colombo, C.4    Palumbo, G.5    Stotzky, G.6
  • 11
    • 77955876747 scopus 로고    scopus 로고
    • Theory of midinfrared absorption microspectroscopy: I. Homogeneous samples
    • Davis B.J., Carney P.S., Bhargava R. Theory of midinfrared absorption microspectroscopy: I. Homogeneous samples. Anal Chem 2010, 82:3474-3486.
    • (2010) Anal Chem , vol.82 , pp. 3474-3486
    • Davis, B.J.1    Carney, P.S.2    Bhargava, R.3
  • 12
    • 78751633126 scopus 로고    scopus 로고
    • Theory of infrared microspectroscopy for intact fibers
    • Davis B.J., Carney P.S., Bhargava R. Theory of infrared microspectroscopy for intact fibers. Anal Chem 2011, 83:525-532.
    • (2011) Anal Chem , vol.83 , pp. 525-532
    • Davis, B.J.1    Carney, P.S.2    Bhargava, R.3
  • 14
    • 0033133865 scopus 로고    scopus 로고
    • Clay-nucleic acid complexes: characteristics and implications for the preservation of genetic material in primeval habitats
    • Franchi M., Bramanti E., Bonzi L.M., Orioli P.L., Vettori C., Gallori E. Clay-nucleic acid complexes: characteristics and implications for the preservation of genetic material in primeval habitats. Orig Life Evol Biosphere 1999, 29:297-315.
    • (1999) Orig Life Evol Biosphere , vol.29 , pp. 297-315
    • Franchi, M.1    Bramanti, E.2    Bonzi, L.M.3    Orioli, P.L.4    Vettori, C.5    Gallori, E.6
  • 16
    • 49349094023 scopus 로고    scopus 로고
    • 2 solutions: ion size, interionic correlation, and solvent dielectric saturation effects
    • 2 solutions: ion size, interionic correlation, and solvent dielectric saturation effects. J Phys Chem B 2008, 112:8955-8965.
    • (2008) J Phys Chem B , vol.112 , pp. 8955-8965
    • Gavryushov, S.1
  • 17
    • 0021996730 scopus 로고
    • Transformation of Azotobacter vinelandii with plasmid DNA
    • Glick B.R., Brooks H.E., Pasternak J. Transformation of Azotobacter vinelandii with plasmid DNA. J Bacteriol 1985, 162:276.
    • (1985) J Bacteriol , vol.162 , pp. 276
    • Glick, B.R.1    Brooks, H.E.2    Pasternak, J.3
  • 19
    • 16244391146 scopus 로고    scopus 로고
    • DNA structural transitions induced by divalent metal ions in aqueous solutions
    • Hackl E.V., Kornilova S.V., Blagoi Y.P. DNA structural transitions induced by divalent metal ions in aqueous solutions. Int J Biol Macromol 2005, 35:175-191.
    • (2005) Int J Biol Macromol , vol.35 , pp. 175-191
    • Hackl, E.V.1    Kornilova, S.V.2    Blagoi, Y.P.3
  • 20
    • 85096034591 scopus 로고    scopus 로고
    • Metal cation complexation with natural organic matter in aqueous solutions: molecular dynamics simulations and potentials of mean force
    • Iskrenova-Tchoukova E., Kalinichev A.G., Kirkpatrick R.J. Metal cation complexation with natural organic matter in aqueous solutions: molecular dynamics simulations and potentials of mean force. Langmuir 2010, 26:15909-15919.
    • (2010) Langmuir , vol.26 , pp. 15909-15919
    • Iskrenova-Tchoukova, E.1    Kalinichev, A.G.2    Kirkpatrick, R.J.3
  • 22
    • 34447558658 scopus 로고    scopus 로고
    • Molecular dynamics simulation of cationic complexation with natural organic matter
    • Kalinichev A., Kirkpatrick R. Molecular dynamics simulation of cationic complexation with natural organic matter. Eur J Soil Sci 2007, 58:909-917.
    • (2007) Eur J Soil Sci , vol.58 , pp. 909-917
    • Kalinichev, A.1    Kirkpatrick, R.2
  • 23
    • 0034657752 scopus 로고    scopus 로고
    • Interaction of alkaline-earth metal ions with calf thymus DNA. Volume and compressibility effects in diluted aqueous solutions
    • Kankia B.I. Interaction of alkaline-earth metal ions with calf thymus DNA. Volume and compressibility effects in diluted aqueous solutions. Biophys Chem 2000, 84:227-237.
    • (2000) Biophys Chem , vol.84 , pp. 227-237
    • Kankia, B.I.1
  • 24
    • 0012427845 scopus 로고    scopus 로고
    • X-ray diffractometry and electron microscopy of DNA from Bacillus subtilis bound on clay minerals
    • Khanna M., Yoder M., Calamai L., Stotzky G. X-ray diffractometry and electron microscopy of DNA from Bacillus subtilis bound on clay minerals. Sci Soils 1998, 3:1-10.
    • (1998) Sci Soils , vol.3 , pp. 1-10
    • Khanna, M.1    Yoder, M.2    Calamai, L.3    Stotzky, G.4
  • 25
    • 79955746482 scopus 로고    scopus 로고
    • Two steps away from novelty - principles of bacterial DNA uptake
    • Krüger N.-J., Stingl K. Two steps away from novelty - principles of bacterial DNA uptake. Mol Microbiol 2011, 80:860-867.
    • (2011) Mol Microbiol , vol.80 , pp. 860-867
    • Krüger, N.-J.1    Stingl, K.2
  • 28
    • 0025076453 scopus 로고
    • Natural genetic transformation of Pseudomonas stutzeri by sand-adsorbed DNA
    • Lorenz M.G., Wackernagel W. Natural genetic transformation of Pseudomonas stutzeri by sand-adsorbed DNA. Arch Microbiol 1990, 154:380-385.
    • (1990) Arch Microbiol , vol.154 , pp. 380-385
    • Lorenz, M.G.1    Wackernagel, W.2
  • 29
    • 18144432612 scopus 로고
    • Highly efficient genetic transformation of Bacillus subtilis attached to sand grains
    • Lorenz M.G., Aardema B.W., Wackernagel W. Highly efficient genetic transformation of Bacillus subtilis attached to sand grains. J Gen Microbiol 1988, 134:107-112.
    • (1988) J Gen Microbiol , vol.134 , pp. 107-112
    • Lorenz, M.G.1    Aardema, B.W.2    Wackernagel, W.3
  • 30
    • 77954269079 scopus 로고    scopus 로고
    • Adsorption of extracellular chromosomal DNA and its effects on natural transformation of Azotobacter vinelandii
    • Lu N., Zilles J.L., Nguyen T.H. Adsorption of extracellular chromosomal DNA and its effects on natural transformation of Azotobacter vinelandii. Appl Environ Microbiol 2010, 76:4179-4184.
    • (2010) Appl Environ Microbiol , vol.76 , pp. 4179-4184
    • Lu, N.1    Zilles, J.L.2    Nguyen, T.H.3
  • 31
    • 0028596395 scopus 로고
    • DNA binding to crystalline silica characterized by Fourier-transform infrared spectroscopy
    • Mao Y., Daniel L.N., Whittaker N., Saffiotti U. DNA binding to crystalline silica characterized by Fourier-transform infrared spectroscopy. Environ Health Perspect 1994, 102:165.
    • (1994) Environ Health Perspect , vol.102 , pp. 165
    • Mao, Y.1    Daniel, L.N.2    Whittaker, N.3    Saffiotti, U.4
  • 32
    • 34547702056 scopus 로고    scopus 로고
    • Role of divalent cations in plasmid DNA adsorption to natural organic matter-coated silica surface
    • Nguyen T.H., Chen K.L. Role of divalent cations in plasmid DNA adsorption to natural organic matter-coated silica surface. Environ Sci Technol 2007, 41:5370-5375.
    • (2007) Environ Sci Technol , vol.41 , pp. 5370-5375
    • Nguyen, T.H.1    Chen, K.L.2
  • 33
    • 33947434496 scopus 로고    scopus 로고
    • Adsorption of plasmid DNA to a natural organic matter-coated silica surface: kinetics, conformation, and reversibility
    • Nguyen T.H., Elimelech M. Adsorption of plasmid DNA to a natural organic matter-coated silica surface: kinetics, conformation, and reversibility. Langmuir 2007, 23:3273-3279.
    • (2007) Langmuir , vol.23 , pp. 3273-3279
    • Nguyen, T.H.1    Elimelech, M.2
  • 34
    • 33846424556 scopus 로고    scopus 로고
    • Plasmid DNA adsorption on silica: kinetics and conformational changes in monovalent and divalent salts
    • Nguyen T.H., Elimelech M. Plasmid DNA adsorption on silica: kinetics and conformational changes in monovalent and divalent salts. Biomacromolecules 2007, 8:24-32.
    • (2007) Biomacromolecules , vol.8 , pp. 24-32
    • Nguyen, T.H.1    Elimelech, M.2
  • 35
    • 0033989223 scopus 로고    scopus 로고
    • Natural transformation of Acinetobacter sp. Strain BD413 with cell lysates of Acinetobacter sp., Pseudomonas fluorescens, and Burkholderia cepacia in soil microcosms
    • Nielsen K.M., Smalla K., van Elsas J.D. Natural transformation of Acinetobacter sp. Strain BD413 with cell lysates of Acinetobacter sp., Pseudomonas fluorescens, and Burkholderia cepacia in soil microcosms. Appl Environ Microbiol 2000, 66:206-212.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 206-212
    • Nielsen, K.M.1    Smalla, K.2    van Elsas, J.D.3
  • 36
    • 0034682335 scopus 로고    scopus 로고
    • Lateral gene transfer and the nature of bacterial innovation
    • Ochman H., Lawrence J.G., Groisman E.A. Lateral gene transfer and the nature of bacterial innovation. Nature 2000, 405:299-304.
    • (2000) Nature , vol.405 , pp. 299-304
    • Ochman, H.1    Lawrence, J.G.2    Groisman, E.A.3
  • 37
    • 0023180876 scopus 로고
    • Effect of mineral iron on the development of transformation competence in Azotobacter vinelandii
    • Page W.J., Grant G.A. Effect of mineral iron on the development of transformation competence in Azotobacter vinelandii. FEMS Microbiol Lett 1987, 41:257-261.
    • (1987) FEMS Microbiol Lett , vol.41 , pp. 257-261
    • Page, W.J.1    Grant, G.A.2
  • 38
    • 0034620331 scopus 로고    scopus 로고
    • Differences between linear chromosomal and supercoiled plasmid DNA in their mechanisms and extent of adsorption on clay minerals
    • Poly F., Chenu C., Simonet P., Rouiller J., Jocteur Monrozier L. Differences between linear chromosomal and supercoiled plasmid DNA in their mechanisms and extent of adsorption on clay minerals. Langmuir 1999, 16:1233-1238.
    • (1999) Langmuir , vol.16 , pp. 1233-1238
    • Poly, F.1    Chenu, C.2    Simonet, P.3    Rouiller, J.4    Jocteur Monrozier, L.5
  • 39
    • 0032896753 scopus 로고    scopus 로고
    • ComEA is a DNA receptor for transformation of competent Bacillus subtilis
    • Provvedi R., Dubnau D. ComEA is a DNA receptor for transformation of competent Bacillus subtilis. Mol Microbiol 1999, 31:271-280.
    • (1999) Mol Microbiol , vol.31 , pp. 271-280
    • Provvedi, R.1    Dubnau, D.2
  • 40
    • 0037214179 scopus 로고    scopus 로고
    • Proton-binding study of standard and reference fulvic acids, humic acids, and natural organic matter
    • Ritchie J., Perdue E. Proton-binding study of standard and reference fulvic acids, humic acids, and natural organic matter. Geochim Cosmochim Acta 2003, 67:85-96.
    • (2003) Geochim Cosmochim Acta , vol.67 , pp. 85-96
    • Ritchie, J.1    Perdue, E.2
  • 41
    • 2442547248 scopus 로고    scopus 로고
    • Environmental antimicrobial contamination from terraccumulation and diffuse pollution pathways
    • Rooklidge S.J. Environmental antimicrobial contamination from terraccumulation and diffuse pollution pathways. Sci Total Environ 2004, 325:1-13.
    • (2004) Sci Total Environ , vol.325 , pp. 1-13
    • Rooklidge, S.J.1
  • 42
    • 0842303297 scopus 로고    scopus 로고
    • Horizontal gene transfer and microbial adaptation to xenobiotics: new types of mobile genetic elements and lessons from ecological studies
    • Springael D., Top E.M. Horizontal gene transfer and microbial adaptation to xenobiotics: new types of mobile genetic elements and lessons from ecological studies. Trends Microbiol 2004, 12:53-58.
    • (2004) Trends Microbiol , vol.12 , pp. 53-58
    • Springael, D.1    Top, E.M.2
  • 43
    • 63449130753 scopus 로고    scopus 로고
    • Transforming DNA uptake gene orthologs do not mediate spontaneous plasmid transformation in Escherichia coli
    • Sun D., Zhang X., Wang L., Prudhomme M., Xie Z., Martin B., et al. Transforming DNA uptake gene orthologs do not mediate spontaneous plasmid transformation in Escherichia coli. J Bacteriol 2009, 191:713.
    • (2009) J Bacteriol , vol.191 , pp. 713
    • Sun, D.1    Zhang, X.2    Wang, L.3    Prudhomme, M.4    Xie, Z.5    Martin, B.6
  • 44
    • 33748600676 scopus 로고    scopus 로고
    • Simple model for DNA adsorption onto a mica surface in 1:1 and 2:1 electrolyte solutions
    • Sushko M.L., Shluger A.L., Rivetti C. Simple model for DNA adsorption onto a mica surface in 1:1 and 2:1 electrolyte solutions. Langmuir 2006, 22:7678-7688.
    • (2006) Langmuir , vol.22 , pp. 7678-7688
    • Sushko, M.L.1    Shluger, A.L.2    Rivetti, C.3
  • 45
    • 0027202733 scopus 로고
    • Interference of humic acids and DNA extracted directly from soil in detection and transformation of recombinant DNA from bacteria and a yeast
    • Tebbe C., Vahjen W. Interference of humic acids and DNA extracted directly from soil in detection and transformation of recombinant DNA from bacteria and a yeast. Appl Environ Microbiol 1993, 59:2657.
    • (1993) Appl Environ Microbiol , vol.59 , pp. 2657
    • Tebbe, C.1    Vahjen, W.2
  • 46
    • 0032691940 scopus 로고    scopus 로고
    • Viscoelastic acoustic response of layered polymer films at fluid-solid interfaces: continuum mechanics approach
    • Voinova M.V., Rodahl M., Jonson M., Kasemo B. Viscoelastic acoustic response of layered polymer films at fluid-solid interfaces: continuum mechanics approach. Phys Scr 1999, 59:391-396.
    • (1999) Phys Scr , vol.59 , pp. 391-396
    • Voinova, M.V.1    Rodahl, M.2    Jonson, M.3    Kasemo, B.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.