Brunfelsia (Solanaceae): A genus evenly divided between South America and radiations on Cuba and other Antillean islands

Molecular Phylogenetics and Evolution

Volumn 64, Issue 1, 2012, Pages 1-11

  Filipowicz, Natalia ^a   Renner, Susanne S ^a  

^a UNIVERSITY OF MUNICH   (Germany)

Author keywords

Ancestral area reconstruction; Ancestral state reconstruction; Antilles; Miocene; Molecular clock; Pollinator changes

Indexed keywords

CHLOROPLAST DNA; RIBOSOMAL SPACER DNA;

ARTICLE; BIOLOGICAL MODEL; CARIBBEAN ISLANDS; DEMOGRAPHY; DNA SEQUENCE; FRUIT; GENETICS; HISTOLOGY; MOLECULAR EVOLUTION; MOLECULAR GENETICS; MONTE CARLO METHOD; NUCLEOTIDE SEQUENCE; PHYLOGENY; PHYLOGEOGRAPHY; PHYSIOLOGY; POLLINATION; SEQUENCE ALIGNMENT; SOLANACEAE; SOUTH AMERICA; SPECIES DIFFERENCE; STATISTICAL MODEL;

BASE SEQUENCE; DEMOGRAPHY; DNA, CHLOROPLAST; DNA, RIBOSOMAL SPACER; EVOLUTION, MOLECULAR; FRUIT; LIKELIHOOD FUNCTIONS; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; MONTE CARLO METHOD; PHYLOGENY; PHYLOGEOGRAPHY; POLLINATION; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SOLANACEAE; SOUTH AMERICA; SPECIES SPECIFICITY; WEST INDIES;

APOIDEA; AVES; BRUNFELSIA; LEPIDOPTERA; SOLANACEAE; SPHINGIDAE; SPHINGOIDEA; TROCHILIDAE;

EID: 84860584918     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2012.02.026     Document Type: Article

References (66)

1. Acevedo-Rodríguez P., Strong M.T. Floristic richness and affinities in the West Indies. Bot. Rev. 2008, 74:5-36.
2. Adams C.D. Flowering Plants of Jamaica 1972, University of the West Indies, Mona, Jamaica.
3. Amshoff, J.G., 1956. Notes on some Cuban Solanaceae. Contrib. Ocas. Mus. Hist. Nat. Col. Salle 15, 6.
4. Ando T., Nomura M., Tsukahara J., Watanabe H., Kokubun H., Tsukamoto T., Hashimoto G., Marchesi E., Kitching I.J. Reproductive isolation in a native population of Petunia sensu Jussieu (Solanaceae). Ann. Bot. 2001, 88:403-413.
5. Antonelli A., Nylander J.A.A., Persson C., Sanmartín I. Tracing the impact of the Andean uplift on Neotropical plant evolution. Proc. Natl. Acad. Sci. USA 2009, 106:9749-9754.
6. Balthazar M.V., Endress P.K., Qiu Y.-L. Phylogenetic relationships in Buxaceae based on nuclear Internal Transcribed Spacers and plastid ndhF sequences. Int. J. Plant Sci. 2000, 161:785-792.
7. Bell C.D., Soltis D.E., Soltis P.P. The age and diversification of the angiosperms re-revisited. Am. J. Bot. 2010, 97:1296-1303.
8. Bennett B.C. Hallucinogenic plants of the Shuar and related indigenous groups in Amazonian Ecuador and Peru. Brittonia 1992, 44:483-493.
9. Bertrand C., Comte G., Piola F. Solid-phase microextraction of volatile compounds from flowers of two Brunfelsia species. Biochem. Syst. Ecol. 2005, 34:371-375.
10. Cocucci A.A. Floral mechanisms in the tribe Salpiglossidae (Solanaceae). Plant Syst. Evol. 1995, 194:207-230.
11. Collinson M.E., Boulter M.C., Holmes P.R. Magnoliophyta (" Angiospermae" ). The Fossil Record 2 1993, 809-841. Chapman and Hall, London. M.J. Benton (Ed.).
12. Cunningham C.W., Zhu H., Hillis D.M. Best-fit maximum-likelihood models for phylogenetic inference: empirical tests with known phylogenies. Evolution 1998, 52:978-987.
13. Cosacov A., Nattero J., Cocucci A.A. Variation of pollinator assemblages and pollen limitation in a locally specialized system: the oil-producing Nierembergia linariifolia (Solanaceae). Ann. Bot. 2008, 102:723-734.
14. D'Arcy W.G. A preliminary synopsis of Salpiglossis and other Cestreae (Solanaceae). Ann. Missouri Bot. Gard. 1978, 65:698-724.
15. Dillon M.O., Tu T., Xie L., Quipuscoa Silvestre V., Wen J. Biogeographic diversification in Nolana (Solanaceae), a ubiquitous member of the Atacama and Peruvian Deserts along the western coast of South America. J. Syst. Evol. 2009, 47:457-476.
16. Drummond A.J., Rambaut A. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol. Biol. 2007, 7:214.
17. Farris D.W., Jaramillo C., Bayona G., Restrepo-Moreno S.A., Montes C., Cardona A., Mora A., Speakman R.J., Glascock M.D., Valencia V. Fracturing of the Panamanian Isthmus during initial collision with South America. Geology 2011, 39:1007-1010.
18. Filipowicz N., Nee M., Renner S.S. Description and Molecular Diagnosis of a New Species of Brunfelsia (Solanaceae) from the Bolivian and Argentinean Andes. Phytokeys 2012, 10:83-94.
19. Francisco-Ortega J., Santiago-Valentín E., Acevedo-Rodríguez P., Lewis C., Pipoly J., Meerow A.W., Maunder M. Seed plant genera endemic to the Caribbean Island biodiversity hotspot: a review and a molecular phylogenetic perspective. Bot. Rev. 2007, 73:183-234.
20. Fuchino H., Sekita S., Mori K., Kawahara N., Satake M., Kiuchi F. A new leishmanicidal saponin from Brunfelsia grandiflora. Chem. Pharm. Bull. (Tokyo) 2008, 56:93-96.
21. Givnish T.J., Barfuss M.H.J., Van Ee B., Riina R., Schulte K., Horres R., Gonsiska P.A., Jabaily R.S., Crayn D.M., Smith A.C.J., Winter K., Brown G.K., Evans T.M., Holst B.K., Luther H., Till W., Zizka G., Berry P.E., Sytsma K.J. Phylogeny, adaptive radiation, and historical biogeography in Bromeliaceae: insights from an eight-locus plastid phylogeny. Am. J. Bot. 2011, 98:872-895.
22. Göker M., Grimm G.W. General functions to transform associate data to host data, and their use in phylogenetic inference from sequences with intra-individual variability. BMC Evol. Biol. 2008, 8:86.
23. Graham A. Geohistory models and Cenozoic paleoenvironments of the Caribbean Region. Syst. Bot. 2003, 28:378-386.
24. Gregory-Wodzicki K.M. Uplift history of the central and northern Andes: a review. Geol. Soc. Am. Bull. 2000, 112:1091-1105.
25. Gübitz, T., Hoballah, M.E., Dell'Olivo, A., Kuhlemeier, C., 2009. Petunia as a model system for the genetics and evolution of pollination syndromes. In: Gerats, T., Strommer, J. (Eds.), Petunia. Evolutionary, Developmental and Physiological Genetics. Springer Science & Business Media, New York, pp. 29-49.
26. Hadač E. Novitates Florae Cubanae. Folia Geobot. Phytotx. 1970, 5:429-433.
27. Hoorn C., WessLeónelingh F.P., ter Steege H., Bermudez M.A., Mora A., Sevink J., Sanmartín I., Sanchez-Meseguer A., Anderson C.L., Figueiredo J.P., Jaramillo C., Riff D., Negri F.R., Hooghiemstra H., Lundberg J., Stadler T., Särkinen T., Antonelli A. Amazonia through time: Andean uplift, climate change, landscape evolution, and biodiversity. Science 2010, 330:927-931.
28. Hunziker A.T. The Genera of Solanaceae 2001, A.R.G. Gantner Verlag K.G., Ruggell, Liechtenstein.
29. Jaramillo C., Rueda M.J., Mora G. Cenozoic plant diversity in the Neotropics. Science 2006, 311:1893-1896.
30. Katoh K., Misawa K., Kuma K., Miyata T. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucl. Acids Res. 2002, 30:3059-3066.
31. Kay M.K., Whittall J.B., Hodges S.A. A survey of nuclear ribosomal internal transcribed spacer substitution rates across angiosperms: an approximate molecular clock with life history effects. BMC Evol. Biol. 2006, 6:36.
32. Kloucek P., Polesny Z., Svobodova B., Vlkova E., Kokoska L. Antibacterial screening of some Peruvian medicinal plants used in Callería District. J. Ethnopharmacol. 2005, 99:309-312.
33. Knapp S. Tobacco to tomatoes: a phylogenetic perspective on fruit diversity in the Solanaceae. J. Exp. Bot. 2001, 53:2001-2022.
34. Knapp, S., 2010. On 'various contrivances': pollination, phylogeny and flower form in the Solanaceae. Philos. Trans. Roy. Soc. London. [Biol] 365, 449-460.
35. Kocyan A., Zhang L., Schaefer H., Renner S.S. A multilocus chloroplast phylogeny for the Cucurbitaceae and its implications for character evolution and classification. Mol. Phyl. Evol. 2007, 44:553-577.
36. Lamarck, J.B., 1783. Encyclopédie méthodique. Botanique, vol. 1. Panckoucke, Paris.
37. Lemey P., Rambaut A., Drummond A.J., Suchard M.A. Bayesian phylogeography finds its roots. PLoS Comput. Biol. 2009, 5:e1000520.
38. León, H., Alain, H., 1974. Flora de Cuba. II. Habana & Rio Piedras, reprint Otto Koeltz Science Publishers, Koenigstein.
39. Liogier A.H. La Flora de la Española 1994, Universidad Central Del Este, San Pedro de Macoris.
40. Liogier, A.H., 1995. Descriptive Flora of Puerto Rico and Adjacent Islands. Spermatophyta, vol. IV, Universidad de Puerto Rico, Puerto Rico.
41. Maddison, W.P., Maddison, D.R., 2010. Mesquite: A Modular System for Evolutionary Analysis. Version 2.73. http://mesquiteproject.org.
42. Oliveira P.E., Gibbs P.E., Barbosa A.A. Moth pollination of woody species in the Cerrados of Central Brazil: a case of so much owed to so few?. Plant Syst. Evol. 2004, 245:41-54.
43. Olmstead R.G., Bohs L., Migid H.A., Santiago-Valentín E., Garcia F.V., Collier S.M. A molecular phylogeny of the Solanaceae. Taxon 2008, 57:1159-1181.
44. Olmstead R.G., Sweere J.A. Combining data in phylogenetic systematics: an empirical approach using three molecular data sets in the Solanaceae. Syst. Biol. 1994, 43:467-481.
45. Paape T., Igic B., Smith S.D., Olmstead R.G., Bohs L., Kohn J.R. A 15-Myr-old genetic bottleneck. Mol. Biol. Evol. 2008, 25:655-663.
46. Palmer J.D. Plastid chromosome: structure and evolution. The Molecular Biology of Plastids 1991, 5-53. Academic Press, San Diego. L. Bogorad, I.K. Vasil (Eds.).
47. Plowman T.C. Four new Brunfelsias from Northwestern South America. Bot. Mus. Leaflets 1973, 23:245-272.
48. Plowman T.C. Two new Brazilian species of Brunfelsia. Bot. Mus. Le-aflets 1974, 24:37-48.
49. Plowman, T.C., 1978. A new section of Brunfelsia: section Guianenses. In: Hawkes, J.G. (Ed.), Systematic Notes on the Solanaceae, vol. 76. Bot. J. Linean. Soc. pp. 294-295.
50. Plowman T.C. The genus Brunfelsia: a conspectus of the taxonomy and biogeography. The Biology and Taxonomy of the Solanaceae 1979, 475-491. Academic Press, London. J.G. Hawkes, R.N. Lester, A.D. Skelding (Eds.).
51. Plowman T.C. Five new species of Brunfelsia from South America. Fieldiana Bot. 1981, 8:1-15.
52. Plowman, T.C., 1998. A revision of the South American species of Brunfelsia (Solanaceae). Fieldiana Bot. n.s. 39, 1-135.
53. Rambaut, A., Drummond, A.J., 2007. Tracer v1.4. http://beast.bio.ed.ac.uk/Tracer.
54. Santiago-Valentín E., Olmstead R.G. Phylogenetics of the Antillean Goetzeoideae (Solanaceae) and their relationships within the Solanaceae based on chloroplast and ITS DNA sequence data. Syst. Bot. 2003, 28:452-460.
55. Santiago-Valentín E., Olmstead R.G. Historical biogeography of Caribbean plants: introduction to current knowledge and possibilities from a phylogenetic perspective. Taxon 2004, 53:299-319.
56. Schultes R.E. Solanaceus hallucinogens and their role in the development of New World cultures. The Biology and Taxonomy of the Solanaceae 1979, 137-160. Academic Press, London. J.G. Hawkes, R.N. Lester, A.D. Skelding (Eds.).
57. Singh M., Cowan S., Child G. Brunfelsia spp. (yesterday, today, tomorrow) toxicity in four dogs. Aust. Vet. J. 2008, 86:214-218.
58. Stamatakis A., Hoover P., Rougemont J. A rapid bootstrap algorithm for the RAxML web servers. Syst. Biol. 2008, 75:758-771.
59. Stehmann J.R., Lorenz-Lemke A.P., Freitas L.B., Semir J. The genus Petunia. Petunia: Evolutionary, Developmental and Physiological Genetics 2009, 1-28. Springer Science + Business Media, New York. T. Gerats, J. Strommer (Eds.).
60. Stehmann J.R., Semir J. Biologia reprodutiva de Calibrachoa elegans (Miers) (Solanaceae). Rev. Bras. Bot. 2001, 24:43-49.
61. Tate J.A., Acosta C., McDill J.del V., Ordóñez A., Moscone E.A., Simpson B.B., Cocucci A.A. Phylogeny and character evolution in Nierembergia (Solanaceae): molecular, morphological, and cytogenetic evidence. Syst. Bot. 2009, 34:198-206.
62. Taberlet P.L., Gielly G., Pautou G., Bo Description and molecular diagnosis of a new species of Brunfelsia (Solanaceae) from the Bolivian and Argentinean Andes. Phytokeys 1. Universal primers for amplification of three non-coding regions of chloroplast DNA. Plant Mol. Biol. 2012, 17:1105-1109.
63. Thiers, B., 2011. Index Herbariorum: A global Directory of Public Herbaria and Associated Staff. New York Botanical Garden's Virtual Herbarium. http://sweetgum.nybg.org/ih/.
64. Vaknin H., Bar-Akiva A., Ovadia R., Nissim-Levi A., Forer I., Weiss D., Oren-Shamir M. Active anthocyanin degradation in Brunfelsia calycina (yesterday-today-tomorrow) flowers. Planta 2005, 222:19-26.
65. Wikström N., Savolainen V., Chase M.W. Evolution of the angiosperms: calibrating the family tree. Proc. Biol. Sci. 2001, 268:2211-2220.
66. Yu Y., Harris A.J., He X.J. S-DIVA (statistical dispersal-vicariance analysis): a tool for inferring biogeographic histories. Mol. Phylogenet. Evol. 2010, 56:848-850.