Lack of genomic imprinting of DNA primase, polypeptide 2 (PRIM2) in human term placenta and white blood cells

Epigenetics

Volumn 7, Issue 5, 2012, Pages 429-431

  Chung, Jaewook ^a   Tsai, Shengdar ^a   James, Andra H ^b   Thames, Betty H ^b   Shytle, Stephanie ^b   Piedrahita, Jorge A ^a  

^a NORTH CAROLINA STATE UNIVERSITY   (United States)

^b DUKE UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

Genomic imprinting; Placenta; PRIM2; Pseudogene; Sequencing; SNP; WBC

Indexed keywords

DNA PRIMASE;

ARTICLE; CONTROLLED STUDY; DATA BASE; FEMALE; GENE LOCUS; GENOME; GENOME IMPRINTING; HUMAN; HUMAN TISSUE; LEUKOCYTE; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PLACENTA; PRIM2 GENE; PSEUDOGENE;

MAMMALIA;

EID: 84860553825     PISSN: 15592294     EISSN: 15592308     Source Type: Journal    
DOI: 10.4161/epi.19777     Document Type: Article

References (20)

1. Falls JG, Pulford DJ, Wylie AA, Jirtle RL. Genomic imprinting: implications for human disease. Am J Pathol 1999; 154:635-47; PMID:10079240; http://dx.doi.org/10.1016/S0002-9440(10)65309-6.
2. Glaser RL, Ramsay JP, Morison IM. The imprinted gene and parent-of-origin effect database now includes parental origin of de novo mutations. Nucleic Acids Res 2006; 34:29-31; PMID:16381868; http://dx.doi.org/10.1093/nar/gkj101.
3. Moore T, Haig D. Genomic imprinting in mammalian development: a parental tug-of-war. Trends Genet 1991; 7:45-9; PMID:2035190.
4. Maccani MA, Marsit CJ. Epigenetics in the placenta. Am J Reprod Immunol 2009; 62:78-89; PMID:19614624; http://dx.doi.org/10.1111/j.1600-0897.2009.00716.x.
5. McGrath J, Solter D. Completion of mouse embryogenesis requires both the maternal and paternal genomes. Cell 1984; 37:179-83; PMID:6722870; http://dx.doi.org/10.1016/0092-8674(84)90313-1.
6. Morison IM, Ramsay JP, Spencer HG. A census of mammalian imprinting. Trends Genet 2005; 21:457-65; PMID:15990197; http://dx.doi.org/10.1016/j.tig.2005.06.008.
7. Monk D, Arnaud P, Apostolidou S, Hills FA, Kelsey G, Stanier P, et al. Limited evolutionary conservation of imprinting in the human placenta. Proc Natl Acad Sci USA 2006; 103:6623-8; PMID:16614068; http://dx.doi.org/10.1073/pnas.0511031103.
8. Luedi PP, Hartemink AJ, Jirtle RL. Genome-wide prediction of imprinted murine genes. Genome Res 2005; 15:875-84; PMID:15930497; http://dx.doi.org/10.1101/gr.3303505.
9. Luedi PP, Dietrich FS, Weidman JR, Bosko JM, Jirtle RL, Hartemink AJ. Computational and experimental identification of novel human imprinted genes. Genome Res 2007; 17:1723-30; PMID:18055845; http://dx.doi.org/10.1101/gr.6584707.
10. Gregg C, Zhang J, Weissbourd B, Luo S, Schroth GP, Haig D, et al. High-resolution analysis of parent-oforigin allelic expression in the mouse brain. Science 2010; 329:643-8; PMID:20616232; http://dx.doi.org/10.1126/science.1190830.
11. Zerbe LK, Kuchta RD. The p58 subunit of human DNA primase is important for primer initiation, elongation and counting. Biochemistry 2002; 41:4891-900; PMID:11939784; http://dx.doi.org/10.1021/bi016030b.
12. Stadlbauer F, Brueckner A, Rehfuess C, Eckerskorn C, Lottspeich F, Förster V, et al. DNA replication in vitro by recombinant DNA-polymerase-α-primase. Eur J Biochem 1994; 222:781-93; PMID:8026492; http://dx.doi.org/10.1111/j.1432-033.1994.tb18925.x.
13. Weiner BE, Huang H, Dattilo BM, Nilges MJ, Fanning E, Chazin WJ. An iron-sulfur cluster in the C-terminal domain of the p58 subunit of human DNA primase. J Biol Chem 2007; 282:33444-51; PMID:17893144; http://dx.doi.org/10.1074/jbc.M705826200.
14. Copeland WC, Wang TSF. Enzymatic characterization of the individual mammalian primase subunits reveals a biphasic mechanism for initiation of DNA replication. J Biol Chem 1993; 268:26179-89; PMID:8253737.
15. Su AI, Wiltshire T, Batalov S, Lapp H, Ching KA, Block D, et al. A gene atlas of the mouse and human protein-encoding transcriptomes. Proc Natl Acad Sci USA 2004; 101:6062-7; PMID:15075390; http://dx.doi.org/10.1073/pnas.0400782101.
16. Pant PVK, Tao H, Beilharz EJ, Ballinger DG, Cox DR, Frazer KA. Analysis of allelic differential expression in human white blood cells. Genome Res 2006; 16:331-9; PMID:16467561; http://dx.doi.org/10.1101/gr.4559106.
17. Shiratori A, Okumura K, Nogami M, Taguchi H, Onozaki T, Inoue T, et al. Assignment of the 49-kDa (PRIM1) and 58-kDa (PRIM2A and PRIM2B) subunit genes of the human DNA primase to chromosome bands 1q44 and 6p11.1-p12. Genomics 1995; 28:350-3; PMID:8530050; http://dx.doi.org/10.1006/geno.1995.1155.
18. Mungall AJ, Palmer SA, Sims SK, Edwards CA, Ashurst JL, Wilming L, et al. The DNA sequence and analysis of human chromosome 6. Nature 2003; 425:805-11; PMID:14574404; http://dx.doi.org/10.1038/nature02055.
19. Hodgkinson A, Eyre-Walker A. The genomic distribution and local context of coincident SNPs in human and chimpanzee. Genome Biol Evol 2010; 2:547-57; PMID:20675616; http://dx.doi.org/10.1093/gbe/evq039.
20. Tsai S, Hardison NE, James AH, Motsinger-Reif AA, Bischoff SR, Thames BH, et al. Transcriptional profiling of human placentas from pregnancies complicated by preeclampsia reveals disregulation of sialic acid acetylesterase and immune signalling pathways. Placenta 2011; 32:175-82; PMID:21183218; http://dx.doi.org/10.1016/j.placenta.2010.11.014.