메뉴 건너뛰기




Volumn 8, Issue 4, 2012, Pages

Type 2 diabetes risk alleles demonstrate extreme directional differentiation among human populations, compared to other diseases

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACKGROUND SELECTION; BIODIVERSITY; CALORIC INTAKE; CONTROLLED STUDY; ETHNIC DIFFERENCE; ETHNICITY; FREQUENCY ANALYSIS; GENE FREQUENCY; GENE SEQUENCE; GENETIC ASSOCIATION; GENETIC CROSS; GENETIC RISK; GENETIC VARIABILITY; GENOTYPE; HEALTH DISPARITY; HUMAN; NON INSULIN DEPENDENT DIABETES MELLITUS; NULL ALLELE; POPULATION DIFFERENTIATION; POPULATION DISTRIBUTION; RISK ASSESSMENT; RISK FACTOR; SEQUENCE ANALYSIS; ASIAN; CAUCASIAN; GENE LINKAGE DISEQUILIBRIUM; GENETIC PREDISPOSITION; GENETICS; HAPLOTYPE; HAPLOTYPE MAP; HUMAN GENOME; NEGRO; POPULATION GENETICS; SINGLE NUCLEOTIDE POLYMORPHISM;

EID: 84860547622     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1002621     Document Type: Article
Times cited : (110)

References (42)
  • 2
    • 52649133436 scopus 로고    scopus 로고
    • Genes and type 2 diabetes mellitus
    • Groop L, Lyssenko V, (2008) Genes and type 2 diabetes mellitus. Curr Diab Rep 8: 192-197.
    • (2008) Curr Diab Rep , vol.8 , pp. 192-197
    • Groop, L.1    Lyssenko, V.2
  • 3
    • 55649105963 scopus 로고    scopus 로고
    • Clinical risk factors, DNA variants, and the development of type 2 diabetes
    • Lyssenko V, Jonsson A, Almgren P, Pulizzi N, Isomaa B, et al. (2008) Clinical risk factors, DNA variants, and the development of type 2 diabetes. N Engl J Med 359: 2220-2232.
    • (2008) N Engl J Med , vol.359 , pp. 2220-2232
    • Lyssenko, V.1    Jonsson, A.2    Almgren, P.3    Pulizzi, N.4    Isomaa, B.5
  • 6
    • 78149437703 scopus 로고    scopus 로고
    • Non-Synonymous and Synonymous Coding SNPs Show Similar Likelihood and Effect Size of Human Disease Association
    • doi:10.1371/journal.pone.0013574
    • Chen R, Davydov EV, Sirota M, Butte AJ, (2010) Non-Synonymous and Synonymous Coding SNPs Show Similar Likelihood and Effect Size of Human Disease Association. PLoS ONE 5: e13574 doi:10.1371/journal.pone.0013574.
    • (2010) PLoS ONE , vol.5
    • Chen, R.1    Davydov, E.V.2    Sirota, M.3    Butte, A.J.4
  • 7
    • 39749181521 scopus 로고    scopus 로고
    • Worldwide human relationships inferred from genome-wide patterns of variation
    • Li JZ, Absher DM, Tang H, Southwick AM, Casto AM, et al. (2008) Worldwide human relationships inferred from genome-wide patterns of variation. Science 319: 1100-1104.
    • (2008) Science , vol.319 , pp. 1100-1104
    • Li, J.Z.1    Absher, D.M.2    Tang, H.3    Southwick, A.M.4    Casto, A.M.5
  • 8
    • 67749106283 scopus 로고    scopus 로고
    • Genome-wide association studies, field synopses, and the development of the knowledge base on genetic variation and human diseases
    • Khoury MJ, Bertram L, Boffetta P, Butterworth AS, Chanock SJ, et al. (2009) Genome-wide association studies, field synopses, and the development of the knowledge base on genetic variation and human diseases. Am J Epidemiol 170: 269-279.
    • (2009) Am J Epidemiol , vol.170 , pp. 269-279
    • Khoury, M.J.1    Bertram, L.2    Boffetta, P.3    Butterworth, A.S.4    Chanock, S.J.5
  • 9
    • 70350234853 scopus 로고    scopus 로고
    • Genetic variants associated with complex human diseases show wide variation across multiple populations
    • Adeyemo A, Rotimi C, (2010) Genetic variants associated with complex human diseases show wide variation across multiple populations. Public Health Genomics 13: 72-79.
    • (2010) Public Health Genomics , vol.13 , pp. 72-79
    • Adeyemo, A.1    Rotimi, C.2
  • 10
    • 77957969887 scopus 로고    scopus 로고
    • Ancestry and disease in the age of genomic medicine
    • Rotimi CN, Jorde LB, (2010) Ancestry and disease in the age of genomic medicine. N Engl J Med 363: 1551-1558.
    • (2010) N Engl J Med , vol.363 , pp. 1551-1558
    • Rotimi, C.N.1    Jorde, L.B.2
  • 11
    • 77249134594 scopus 로고    scopus 로고
    • Rare variants create synthetic genome-wide associations
    • doi:10.1371/journal.pbio.1000294
    • Dickson SP, Wang K, Krantz I, Hakonarson H, Goldstein DB, (2010) Rare variants create synthetic genome-wide associations. PLoS Biol 8: e1000294 doi:10.1371/journal.pbio.1000294.
    • (2010) PLoS Biol , vol.8
    • Dickson, S.P.1    Wang, K.2    Krantz, I.3    Hakonarson, H.4    Goldstein, D.B.5
  • 12
    • 84904834630 scopus 로고    scopus 로고
    • Natural selection at genomic regions associated with obesity and type-2 diabetes: East Asians and sub-Saharan Africans exhibit high levels of differentiation at type-2 diabetes regions
    • Klimentidis YC, Abrams M, Wang J, Fernandez JR, Allison DB, (2010) Natural selection at genomic regions associated with obesity and type-2 diabetes: East Asians and sub-Saharan Africans exhibit high levels of differentiation at type-2 diabetes regions. Hum Genet.
    • (2010) Hum Genet
    • Klimentidis, Y.C.1    Abrams, M.2    Wang, J.3    Fernandez, J.R.4    Allison, D.B.5
  • 13
    • 66049157487 scopus 로고    scopus 로고
    • Signals of recent positive selection in a worldwide sample of human populations
    • Pickrell JK, Coop G, Novembre J, Kudaravalli S, Li JZ, et al. (2009) Signals of recent positive selection in a worldwide sample of human populations. Genome Res 19: 826-837.
    • (2009) Genome Res , vol.19 , pp. 826-837
    • Pickrell, J.K.1    Coop, G.2    Novembre, J.3    Kudaravalli, S.4    Li, J.Z.5
  • 14
    • 68449102930 scopus 로고    scopus 로고
    • Is the thrifty genotype hypothesis supported by evidence based on confirmed type 2 diabetes- and obesity-susceptibility variants?
    • Southam L, Soranzo N, Montgomery SB, Frayling TM, McCarthy MI, et al. (2009) Is the thrifty genotype hypothesis supported by evidence based on confirmed type 2 diabetes- and obesity-susceptibility variants? Diabetologia 52: 1846-1851.
    • (2009) Diabetologia , vol.52 , pp. 1846-1851
    • Southam, L.1    Soranzo, N.2    Montgomery, S.B.3    Frayling, T.M.4    McCarthy, M.I.5
  • 15
    • 77957370404 scopus 로고    scopus 로고
    • Consistent association of type 2 diabetes risk variants found in europeans in diverse racial and ethnic groups
    • doi:10.1371/journal.pgen.1001078
    • Waters KM, Stram DO, Hassanein MT, Le Marchand L, Wilkens LR, et al. (2010) Consistent association of type 2 diabetes risk variants found in europeans in diverse racial and ethnic groups. PLoS Genet 6: e1001078 doi:10.1371/journal.pgen.1001078.
    • (2010) PLoS Genet , vol.6
    • Waters, K.M.1    Stram, D.O.2    Hassanein, M.T.3    Le Marchand, L.4    Wilkens, L.R.5
  • 16
    • 34447340935 scopus 로고    scopus 로고
    • TCF7L2 is reproducibly associated with type 2 diabetes in various ethnic groups: a global meta-analysis
    • Cauchi S, El Achhab Y, Choquet H, Dina C, Krempler F, et al. (2007) TCF7L2 is reproducibly associated with type 2 diabetes in various ethnic groups: a global meta-analysis. J Mol Med 85: 777-782.
    • (2007) J Mol Med , vol.85 , pp. 777-782
    • Cauchi, S.1    El Achhab, Y.2    Choquet, H.3    Dina, C.4    Krempler, F.5
  • 17
    • 77953066379 scopus 로고    scopus 로고
    • Genetics factors contributing to type 2 diabetes across ethnicities
    • Elbein SC, (2009) Genetics factors contributing to type 2 diabetes across ethnicities. J Diabetes Sci Technol 3: 685-689.
    • (2009) J Diabetes Sci Technol , vol.3 , pp. 685-689
    • Elbein, S.C.1
  • 18
    • 34548032087 scopus 로고    scopus 로고
    • Genome-wide association studies provide new insights into type 2 diabetes aetiology
    • Frayling TM, (2007) Genome-wide association studies provide new insights into type 2 diabetes aetiology. Nat Rev Genet 8: 657-662.
    • (2007) Nat Rev Genet , vol.8 , pp. 657-662
    • Frayling, T.M.1
  • 19
    • 79953216697 scopus 로고    scopus 로고
    • Updated genetic score based on 34 confirmed type 2 diabetes Loci is associated with diabetes incidence and regression to normoglycemia in the diabetes prevention program
    • Hivert MF, Jablonski KA, Perreault L, Saxena R, McAteer JB, et al. (2011) Updated genetic score based on 34 confirmed type 2 diabetes Loci is associated with diabetes incidence and regression to normoglycemia in the diabetes prevention program. Diabetes 60: 1340-1348.
    • (2011) Diabetes , vol.60 , pp. 1340-1348
    • Hivert, M.F.1    Jablonski, K.A.2    Perreault, L.3    Saxena, R.4    McAteer, J.B.5
  • 20
    • 0031848439 scopus 로고    scopus 로고
    • Human genome diversity
    • Cann HM, (1998) Human genome diversity. C R Acad Sci III 321: 443-446.
    • (1998) C R Acad Sci III , vol.321 , pp. 443-446
    • Cann, H.M.1
  • 21
    • 0015879546 scopus 로고
    • Distribution of gene frequency as a test of the theory of the selective neutrality of polymorphisms
    • Lewontin RC, Krakauer J, (1973) Distribution of gene frequency as a test of the theory of the selective neutrality of polymorphisms. Genetics 74: 175-195.
    • (1973) Genetics , vol.74 , pp. 175-195
    • Lewontin, R.C.1    Krakauer, J.2
  • 22
  • 23
    • 77956561809 scopus 로고    scopus 로고
    • Likelihood ratios for genome medicine
    • Morgan AA, Chen R, Butte AJ, (2010) Likelihood ratios for genome medicine. Genome Med 2: 30.
    • (2010) Genome Med , vol.2 , pp. 30
    • Morgan, A.A.1    Chen, R.2    Butte, A.J.3
  • 24
    • 84856189327 scopus 로고    scopus 로고
    • 12th International Congress of Human Genetics. Diabetes genes decline out of Africa
    • Gibbons A, (2011) 12th International Congress of Human Genetics. Diabetes genes decline out of Africa. Science 334: 583.
    • (2011) Science , vol.334 , pp. 583
    • Gibbons, A.1
  • 25
    • 77952405169 scopus 로고    scopus 로고
    • Colloquium paper: human adaptations to diet, subsistence, and ecoregion are due to subtle shifts in allele frequency
    • Hancock AM, Witonsky DB, Ehler E, Alkorta-Aranburu G, Beall C, et al. (2010) Colloquium paper: human adaptations to diet, subsistence, and ecoregion are due to subtle shifts in allele frequency. Proc Natl Acad Sci U S A 107 (Suppl 2): 8924-8930.
    • (2010) Proc Natl Acad Sci U S A , vol.107 , Issue.SUPPL. 2 , pp. 8924-8930
    • Hancock, A.M.1    Witonsky, D.B.2    Ehler, E.3    Alkorta-Aranburu, G.4    Beall, C.5
  • 26
    • 38449119643 scopus 로고    scopus 로고
    • Challenges in human genetic diversity: demographic history and adaptation
    • Balaresque PL, Ballereau SJ, Jobling MA, (2007) Challenges in human genetic diversity: demographic history and adaptation. Hum Mol Genet 16 Spec No. 2: R134-139.
    • (2007) Hum Mol Genet , vol.16 Spec
    • Balaresque, P.L.1    Ballereau, S.J.2    Jobling, M.A.3
  • 27
    • 70349566593 scopus 로고
    • Diabetes mellitus: a "thrifty" genotype rendered detrimental by "progress"?
    • Neel JV, (1962) Diabetes mellitus: a "thrifty" genotype rendered detrimental by "progress"? Am J Hum Genet 14: 353-362.
    • (1962) Am J Hum Genet , vol.14 , pp. 353-362
    • Neel, J.V.1
  • 28
    • 84860544605 scopus 로고    scopus 로고
    • CDC, 2007 National Diabetes Fact Sheet
    • CDC (2007) 2007 National Diabetes Fact Sheet.
    • (2007)
  • 29
    • 33644974626 scopus 로고    scopus 로고
    • Estimating diabetes prevalence by small area in England
    • Congdon P, (2006) Estimating diabetes prevalence by small area in England. J Public Health (Oxf) 28: 71-81.
    • (2006) J Public Health (Oxf) , vol.28 , pp. 71-81
    • Congdon, P.1
  • 30
    • 74049099565 scopus 로고    scopus 로고
    • Life-course socioeconomic position and incidence of diabetes mellitus among blacks and whites: the Alameda County Study, 1965-1999
    • Maty SC, James SA, Kaplan GA, (2010) Life-course socioeconomic position and incidence of diabetes mellitus among blacks and whites: the Alameda County Study, 1965-1999. Am J Public Health 100: 137-145.
    • (2010) Am J Public Health , vol.100 , pp. 137-145
    • Maty, S.C.1    James, S.A.2    Kaplan, G.A.3
  • 31
    • 0035432294 scopus 로고    scopus 로고
    • High prevalence of type 2 diabetes in all ethnic groups, including Europeans, in a British inner city: relative poverty, history, inactivity, or 21st century Europe?
    • Riste L, Khan F, Cruickshank K, (2001) High prevalence of type 2 diabetes in all ethnic groups, including Europeans, in a British inner city: relative poverty, history, inactivity, or 21st century Europe? Diabetes Care 24: 1377-1383.
    • (2001) Diabetes Care , vol.24 , pp. 1377-1383
    • Riste, L.1    Khan, F.2    Cruickshank, K.3
  • 33
    • 84857627137 scopus 로고    scopus 로고
    • Projected and Observed Diabetes Epidemics in China and Beyond
    • Zhao D, Zhao F, Li Y, Zheng Z, (2011) Projected and Observed Diabetes Epidemics in China and Beyond. Curr Cardiol Rep.
    • (2011) Curr Cardiol Rep
    • Zhao, D.1    Zhao, F.2    Li, Y.3    Zheng, Z.4
  • 35
    • 77952574849 scopus 로고    scopus 로고
    • Uncovering the roles of rare variants in common disease through whole-genome sequencing
    • Cirulli ET, Goldstein DB, (2010) Uncovering the roles of rare variants in common disease through whole-genome sequencing. Nat Rev Genet 11: 415-425.
    • (2010) Nat Rev Genet , vol.11 , pp. 415-425
    • Cirulli, E.T.1    Goldstein, D.B.2
  • 37
    • 11144232766 scopus 로고
    • Medical subject headings
    • Rogers FB, (1963) Medical subject headings. Bull Med Libr Assoc 51: 114-116.
    • (1963) Bull Med Libr Assoc , vol.51 , pp. 114-116
    • Rogers, F.B.1
  • 38
    • 67249117049 scopus 로고    scopus 로고
    • Potential etiologic and functional implications of genome-wide association loci for human diseases and traits
    • Hindorff LA, Sethupathy P, Junkins HA, Ramos EM, Mehta JP, et al. (2009) Potential etiologic and functional implications of genome-wide association loci for human diseases and traits. Proc Natl Acad Sci U S A 106: 9362-9367.
    • (2009) Proc Natl Acad Sci U S A , vol.106 , pp. 9362-9367
    • Hindorff, L.A.1    Sethupathy, P.2    Junkins, H.A.3    Ramos, E.M.4    Mehta, J.P.5
  • 39
    • 0345863927 scopus 로고    scopus 로고
    • The Unified Medical Language System (UMLS): integrating biomedical terminology
    • Bodenreider O, (2004) The Unified Medical Language System (UMLS): integrating biomedical terminology. Nucleic Acids Res 32: D267-270.
    • (2004) Nucleic Acids Res , vol.32
    • Bodenreider, O.1
  • 40
    • 0026292681 scopus 로고
    • Free software helps map and display data
    • Wessel PaWHFS
    • Wessel PaWHFS (1991) Free software helps map and display data. EOS Trans 72.
    • (1991) EOS Trans , vol.72
  • 41
    • 10344221021 scopus 로고    scopus 로고
    • Disentangling the effects of demography and selection in human history
    • Stajich JE, Hahn MW, (2005) Disentangling the effects of demography and selection in human history. Mol Biol Evol 22: 63-73.
    • (2005) Mol Biol Evol , vol.22 , pp. 63-73
    • Stajich, J.E.1    Hahn, M.W.2
  • 42
    • 74949138753 scopus 로고    scopus 로고
    • Human genome sequencing using unchained base reads on self-assembling DNA nanoarrays
    • Drmanac R, Sparks AB, Callow MJ, Halpern AL, Burns NL, et al. (2010) Human genome sequencing using unchained base reads on self-assembling DNA nanoarrays. Science 327: 78-81.
    • (2010) Science , vol.327 , pp. 78-81
    • Drmanac, R.1    Sparks, A.B.2    Callow, M.J.3    Halpern, A.L.4    Burns, N.L.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.