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Volumn 28, Issue 9, 2012, Pages 1276-1277

SAMSCOPE: An opengl-based real-time interactive scale-free SAM viewer

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL; ARTICLE; BACILLUS SUBTILIS; COMPUTER GRAPHICS; COMPUTER LANGUAGE; COMPUTER PROGRAM; DNA SEQUENCE; GENETICS; GENOME; HUMAN; METHODOLOGY; SEQUENCE ALIGNMENT;

EID: 84860425080     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/bts122     Document Type: Article
Times cited : (7)

References (11)
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    • David, M. et al. (2011) SHRiMP2: sensitive yet practical SHort Read Mapping. Bioinformatics, 27, 1011-1012.
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  • 2
    • 77955895425 scopus 로고    scopus 로고
    • BigWig and BigBed: enabling browsing of large distributed datasets
    • Kent, W.J. et al. (2010) BigWig and BigBed: enabling browsing of large distributed datasets. Bioinformatics, 26, 2204-2207.
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    • Kent, W.J.1
  • 3
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • Langmead, B. et al. (2009) Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol., 10, R25.
    • (2009) Genome Biol , vol.10
    • Langmead, B.1
  • 4
    • 55549097836 scopus 로고    scopus 로고
    • Mapping short DNA sequencing reads and calling variants using mapping quality scores
    • Li, H. et al. (2008) Mapping short DNA sequencing reads and calling variants using mapping quality scores. Genome Res., 18, 1851-1858.
    • (2008) Genome Res. , vol.18 , pp. 1851-1858
    • Li, H.1
  • 5
    • 68549104404 scopus 로고    scopus 로고
    • The SequenceAlignment/Map format and SAMtools
    • Li, H. et al. (2009) The SequenceAlignment/Map format and SAMtools. Bioinformatics, 25, 2078-2079.
    • (2009) Bioinformatics , vol.25 , pp. 2078-2079
    • Li, H.1
  • 6
    • 77949512406 scopus 로고    scopus 로고
    • Tablet-next generation sequence assembly visualization
    • Milne, I. et al. (2010) Tablet-next generation sequence assembly visualization. Bioinformatics, 26, 401-402.
    • (2010) Bioinformatics , vol.26 , pp. 401-402
    • Milne, I.1
  • 7
    • 70349739736 scopus 로고    scopus 로고
    • The Integrated Genome Browser: free software for distribution and exploration of genome-scale datasets
    • Nicol, J.W. et al. (2009) The Integrated Genome Browser: free software for distribution and exploration of genome-scale datasets. Bioinformatics, 25, 2730-2731.
    • (2009) Bioinformatics , vol.25 , pp. 2730-2731
    • Nicol, J.W.1
  • 8
    • 70449711243 scopus 로고    scopus 로고
    • Computation for ChIP-seq and RNA-seq studies
    • Pepke, S. et al. (2009) Computation for ChIP-seq and RNA-seq studies. Nat. Methods, 6, 22-32.
    • (2009) Nat. Methods , vol.6 , pp. 22-32
    • Pepke, S.1
  • 9
    • 78651271733 scopus 로고    scopus 로고
    • Integrative genomics viewer
    • Robinson, J.T. et al. (2011) Integrative genomics viewer. Nat. Biotechnol., 29, 24-26.
    • (2011) Nat. Biotechnol. , vol.29 , pp. 24-26
    • Robinson, J.T.1
  • 10
    • 77956285927 scopus 로고    scopus 로고
    • Chickens possess centromeres with both extended tandem repeats and short non-tandem-repetitive sequences
    • Shang, W.H. et al. (2010) Chickens possess centromeres with both extended tandem repeats and short non-tandem-repetitive sequences. Genome Res., 20, 1219-1228.
    • (2010) Genome Res. , vol.20 , pp. 1219-1228
    • Shang, W.H.1
  • 11
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    • Pyramidal parametrics
    • Williams, L. (1983) Pyramidal parametrics. Comp. Graph., 17, 1-11.
    • (1983) Comp. Graph. , vol.17 , pp. 1-11
    • Williams, L.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.