Proteomics of a new esophageal cancer cell line established from Persian patient

Gene

Volumn 500, Issue 1, 2012, Pages 124-133

  Moghanibashi, Mehdi ^a   Jazii, Ferdous Rastgar ^b,c   Soheili, Zahra Soheila ^b   Zare, Maryam ^b,d   Karkhane, Aliasghar ^b   Parivar, Kazem ^a   Mohamadynejad, Parisa ^e  

^a ISLAMIC AZAD UNIVERSITY   (Iran)

^b NATIONAL INSTITUTE OF GENETIC ENGINEERING AND BIOTECHNOLOGY   (Iran)

^c Payam Noor University ^*  (Canada)

^d PAYAME NOOR UNIVERSITY   (Iran)

^e ISLAMIC AZAD UNIVERSITY   (Iran)

Author keywords

Cell line; Esophageal squamous cell carcinoma; Proteomics

Indexed keywords

ALBUMIN; CALPAIN; CYTOKERATIN 1; CYTOKERATIN 8; GLUTAMATE DEHYDROGENASE; LIPOCORTIN 1; LIPOCORTIN 2; LIPOCORTIN 4; PROTEASOME; PROTEIN S 100;

ARTICLE; CONTROLLED STUDY; ESOPHAGEAL SQUAMOUS CELL CARCINOMA; HUMAN; HUMAN CELL; IMAGE ANALYSIS; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; PERSIAN GULF SYNDROME; PRIORITY JOURNAL; PROTEOMICS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; TWO DIMENSIONAL DIFFERENCE GEL ELECTROPHORESIS; WESTERN BLOTTING;

EID: 84860345279     PISSN: 03781119     EISSN: 18790038     Source Type: Journal    
DOI: 10.1016/j.gene.2012.03.038     Document Type: Article

References (60)

1. Adams J. The proteasome: structure, function, and role in the cell. Cancer Treat. Rev. 2003, 29:3-9.
2. Asangani I.A., Rasheed S.A.K., Leupold J.H., Post S., Allgayer H. NRF-1, and AP-1 regulate the promoter of the human calpain small subunit 1 (CAPNS1) gene. Gene 2008, 410:197-206.
3. Bai D.S., et al. Capn4 overexpression underlies tumor invasion and metastasis after liver transplantation for hepatocellular carcinoma. Hepatology 2009, 49:460-470.
4. Blum H., Beier H., Gross H.J. Improved silver staining of plant proteins, RNA and DNA in polyacrylamide gels. Electrophoresis 1987, 8:93-99.
5. Bradford M.M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 1976, 72:248-254.
6. Brockmann J.G., Nottberg H.S., Glodny B., Heinecke A., Senninger N.J. CYFRA 21-1 serum analysis in patients with esophageal cancer. Clin. Cancer Res. 2000, 6:4249-4252.
7. Burger A.M., Seth A.K. The ubiquitin-mediated protein degradation pathway in cancer: therapeutic implications. Eur. J. Cancer 2004, 40:2217-2229.
8. Buss F., Luzio J.P., Kendrick Jones J. Myosin VI, an actin motor for membrane traffic and cell migration. Traffic 2002, 3:851-858.
9. Cai, Z., Wang, Q., Zhou, Y., Zheng, L., Chiu, J.F., He, Q.Y., 2010. Epidermal growth factor-induced epithelial-mesenchymal transition in human esophageal carcinoma cells-a model for the study of metastasis. Cancer Lett. 296, 88-95.
10. Chen N., Karantza-Wadsworth V. Role and regulation of autophagy in cancer. Biochim. Biophys. Acta (BBA) Mol. Cell Res. 2009, 1793:1516-1523.
11. Choi, H.S., et al., 2010. Tropomyosin3 overexpression and a potential link to epithelial-mesenchymal transition in human hepatocellular carcinoma. BMC Cancer, 10, 122.
12. Creekmore, A.L., Silkworth, W.T., Cimini, D., Jensen, R.V., Roberts, P.C., Schmelz, E.M., 2011. Changes in gene expression and cellular architecture in an ovarian cancer progression model. PloS One 6, e17676.
13. Demarchi F., Schneider C. The calpain system as a modulator of stress/damage response. Cell Cycle 2007, 6:136-138.
14. Ding, X., He, Z., Shi, Y., Wang, Q., Wang, Y., 2010. Targeting TRPC6 channels in oesophageal carcinoma growth. Expert Opin. Ther. Targets 14, 513-527.
15. Dourdin N., et al. Reduced cell migration and disruption of the actin cytoskeleton in calpain-deficient embryonic fibroblasts. J. Biol. Chem. 2001, 276:48382.
16. Du X.L., et al. Proteomic profiling of proteins dysregulted in Chinese esophageal squamous cell carcinoma. J. Mol. Med. 2007, 85:863-875.
17. Duncan R., Carpenter B., Main L., Telfer C., Murray G. Characterisation and protein expression profiling of annexins in colorectal cancer. Br. J. Cancer 2007, 98:426-433.
18. Feng, J., et al., 2011. Clinicopathological pattern and annexin A2 and Cdc42 status in patients presenting with differentiation and lymph node metastasis of esophageal squamous cell carcinomas. Mol. Biol. Rep. 1-8.
19. Franco S.J., Huttenlocher A. Regulating cell migration: calpains make the cut. J. Cell Sci. 2005, 118:3829.
20. Gazdar, A.F., Gao, B., Minna, J.D., 2010. Lung cancer cell lines: useless artifacts or invaluable tools for medical science? Lung Cancer 68, 309-318.
21. Gunning P., O'neill G., Hardeman E. Tropomyosin-based regulation of the actin cytoskeleton in time and space. Physiol. Rev. 2008, 88:1.
22. Helfman D.M., Flynn P., Khan P., Saeed A. Tropomyosin as a regulator of cancer cell transformation. Tropomyosin 2008, 124-131.
23. Herrmann H., Strelkov S.V., Burkhard P., Aebi U. Intermediate filaments: primary determinants of cell architecture and plasticity. J. Clin. Invest. 2009, 119:1772.
24. Islami, F., Pourshmas, A., Semnani, S., 2010. Prevalence of esophageal cancer risk factors among Turkmen and non-Turkmen ethnic groups in a high incidence area in Iran. Arch. Iran. Med. 13, 111-115.
25. Jaffe L.F. A calcium-based theory of carcinogenesis. Adv. Cancer Res. 2005, 94:231-263.
26. Jazii F.R., et al. Identification of squamous cell carcinoma associated proteins by proteomics and loss of beta tropomyosin expression in esophageal cancer. World J. Gastroenterol. 2006, 12:7104.
27. Jeon, Y.J., et al., 2010. Annexin A4 interacts with the NF- B p50 subunit and modulates NF-B transcriptional activity in a Ca 2+-dependent manner. Cell Mol. Life Sci. 67, 2271-2281.
28. Karantza, V., 2011. Keratins in health and cancer: more than mere epithelial cell markers. Oncogene 30, 127-138.
29. Kim, A., Serada, S., Enomoto, T., Naka, T., 2010. Targeting annexin A4 to counteract chemoresistance in clear cell carcinoma of the ovary. Expert Opin. Ther. Targets 1-9.
30. Kuramitsu Y., Nakamura K. Proteomic analysis of cancer tissues: shedding light on carcinogenesis and possible biomarkers. Proteomics 2006, 6:5650-5661.
31. Lam K., Loke S., Ma L. Cytokeratin expression in non-neoplastic oesophageal epithelium and squamous cell carcinoma of the oesophagus. Virchows Arch. 1995, 426:345-349.
32. Lenaerts K., Bouwman F., Lamers W., Renes J., Mariman E. Comparative proteomic analysis of cell lines and scrapings of the human intestinal epithelium. BMC Genomics 2007, 8:91.
33. Lenartowska, M., Walczewski, J., 2011. Myosin VI: the unique motor protein of the actin cytoskeleton. Postepy Biochem. 57, 63.
34. Lin L.L., et al. Annexin A4: a novel molecular marker for gastric cancer with Helicobacter pylori infection using proteomics approach. Proteomics Clin. Appl. 2008, 2:619-634.
35. Lin J.J.C., Eppinga R.D., Warren K.S., McCrae K.R. Human tropomyosin isoforms in the regulation of cytoskeleton functions. Tropomyosin 2008, 201-222.
36. Liu L., Wang S., Zhang Q., Ding Y. Identification of potential genes/proteins regulated by Tiam1 in colorectal cancer by microarray analysis and proteome analysis. Cell Biol. Int. 2008, 32:1215-1222.
37. Liu, Z., et al., 2011. Proteomic identification of differentially-expressed proteins in esophageal cancer in three ethnic groups in Xinjiang. Mol. Biol. Rep. 1-9.
38. Lu F., et al. T-type Ca2+ channel expression in human esophageal carcinomas: a functional role in proliferation. Cell Calcium 2008, 43:49-58.
39. Luo A., et al. Discovery of Ca2+-relevant and differentiation-associated genes downregulated in esophageal squamous cell carcinoma using cDNA microarray. Oncogene 2003, 23:1291-1299.
40. Martinkova J., Gadher S.J., Hajduch M., Kovarova H. Challenges in cancer research and multifaceted approaches for cancer biomarker quest. FEBS Lett. 2009, 583:1772-1784.
41. Maru Y. S100A8 and S100A9 regulate lung metastasis. Seikagaku 2007, 79:871-874.
42. Munoz N. Epidemiological aspects of oesophageal cancer. Endoscopy 1993, 25:609-612.
43. Orimo A., et al. Stromal fibroblasts present in invasive human breast carcinomas promote tumor growth and angiogenesis through elevated SDF-1/CXCL12 secretion. Cell 2005, 121:335-348.
44. Pamonsinlapatham P., et al. Capns1, a new binding partner of RasGAP-SH3 domain in K-RasV12 oncogenic cells: modulation of cell survival and migration. Cell. Signal. 2008, 20:2119-2126.
45. Parkash, J., Asotra, K., 2010. Calcium wave signaling in cancer cells. Life Sci.
46. Parkin D.M., Bray F., Ferlay J., Pisani P. Estimating the world cancer burden: Globocan 2000. Int. J. Cancer 2001, 94:153-156.
47. Paweletz C.P., et al. Loss of annexin 1 correlates with early onset of tumorigenesis in esophageal and prostate carcinoma. Cancer Res. 2000, 60:6293.
48. Qi Y.J., et al. Proteomic identification of malignant transformation related proteins in esophageal squamous cell carcinoma. J. Cell. Biochem. 2008, 104:1625-1635.
49. Reymond M.A., Steinert R., Kähne T., Sagynaliev E., Allal A.S., Lippert H. Expression and functional proteomics studies in colorectal cancer. Pathol. Res. Pract. 2004, 200:119-127.
50. Takikita, M., et al., 2011. Fascin and CK4 as Biomarkers for esophageal squamous cell carcinoma. Anticancer Res. 31, 945.
51. Tennant D.A., Durán R.V., Boulahbel H., Gottlieb E. Metabolic transformation in cancer. Carcinogenesis 2009, 30:1269.
52. Thomson, S., et al., 2011. A systems view of epithelial-mesenchymal transition signaling states. Clin. Exp. Metastasis 1-19.
53. Tsutsui S., Kuwano H., Watanabe M., Kitamura M., Sugimachi K. Resection margin for squamous cell carcinoma of the esophagus. Ann. Surg. 1995, 222:193.
54. Wang K.L., et al. Expression of annexin A1 in esophageal and esophagogastric junction adenocarcinomas: association with poor outcome. Clin. Cancer Res. 2006, 12:4598.
55. Yamamoto K., Oka M., Hayashi H., Tangoku A., Gondo T., Suzuki T. CYFRA 21 1 is a useful marker for esophageal squamous cell carcinoma. Cancer 1997, 79:1647-1655.
56. Yamashiro, Y., et al., 2010. Ectopic coexpression of keratin 8 and 18 promotes invasion of transformed keratinocytes and is induced in patients with cutaneous squamous cell carcinoma. Biochem. Biophys. Res. Commun.
57. Yoshida H., et al. Lessons from border cell migration in the Drosophila ovary: a role for myosin VI in dissemination of human ovarian cancer. Proc. Natl. Acad. Sci. U.S.A. 2004, 101:8144.
58. Zare, M., Jazii, F.R., Soheili, Z.S., Moghanibashi, M.M., 2011. Downregulation of tropomyosin-1 in squamous cell carcinoma of esophagus, the role of Ras signaling and methylation. Mol. Carcinog.
59. Zhang X., et al. Expression of annexin II in human esophageal squamous cell carcinoma. Zhonghua Zhong Liu Za Zhi 2003, 353.
60. Zhi H., et al. The deregulation of arachidonic acid metabolism related genes in human esophageal squamous cell carcinoma. Int. J. Cancer 2003, 106:327-333.