Ac-Ds solutions for rice insertion mutagenesis

Methods in Molecular Biology

Volumn 859, Issue , 2012, Pages 177-187

  Guiderdoni, Emmanuel ^a   Gantet, Pascal ^b,c  

^a UMR AGAP   (France)

^b UNIV MONTPELLIER   (France)

^c Institute of Agricultural Genetics   (Viet Nam)

Author keywords

Ac Ds; Activation tagging; Enhancer trapping; Functional genomics; Gene trapping; Insertion mutagenesis; Rice

Indexed keywords

RECOMBINANT PROTEIN;

ARTICLE; BIOSYNTHESIS; GENE EXPRESSION REGULATION; GENETICS; MAIZE; METHODOLOGY; MOLECULAR CLONING; PLANT GENE; REPORTER GENE; RICE; TRANSGENE; TRANSPOSON;

CLONING, MOLECULAR; DNA TRANSPOSABLE ELEMENTS; GENES, PLANT; GENES, REPORTER; MUTAGENESIS, INSERTIONAL; ORYZA SATIVA; RECOMBINANT PROTEINS; TRANSGENES; ZEA MAYS;

EID: 84860199596     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-61779-603-6_10     Document Type: Article

References (30)

1. Itoh T, et al. (2007) Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana. Genome Res 17:175-183 (Pubitemid 46220762)
2. Yu J, et al. (2002) A draft sequence of the rice genome (Oryza sativa L. ssp. indica). Science 296:79-92. (Pubitemid 34280064)
3. Hirochika H, et al. (2004) Rice mutant resources for gene discovery. Plant Mol Biol 54:325-334. (Pubitemid 39059560)
4. Wu JL, et al. (2005) Chemical- and irradiationinduced mutants of indica rice IR64 for forward and reverse genetics. Plant Mol Biol 59:85-97.
5. Till BJ, et al. (2007) Discovery of chemically induced mutations in rice by TILLING. BMC Plant Biol 7:19.
6. Hirochika H (2001) Contribution of the Tos17 retrotransposon to rice functional genomics. Cur Opin Plant Biol 4:118-122. (Pubitemid 32192129)
7. Krishnan A, et al. (2009) Mutant resources in rice for functional genomics of the grasses. Plant Physiol 149:165-170.
8. Xue,Y, Li J, Xu Z (2003) Recent highlights of the China Rice Functional Genomics Program. Trends Genet 19:390-394. (Pubitemid 36794541)
9. Greco R, et al. (2004) Transcription and somatic transposition of the maize En/Spm transposon system in rice. Mol Gen Genomics 270:514-523. (Pubitemid 38202264)
10. Kumar CS, Wing RA, Sundaresan V (2005) Effi cient insertional mutagenesis in rice using the maize En/Spm elements. Plant J 44:879-892. (Pubitemid 43922151)
11. Greco R, et al. (2003) Transpositional behaviour of an Ac/Ds system for reverse genetics in rice. Theor Appl Genet 108:10-24. (Pubitemid 38105604)
12. Chin HG, et al. (1999) Molecular analysis of rice plants harboring an Ac/Ds transposable element-mediated gene trapping system. Plant J 19:615-623.
13. Kolesnik T, et al. (2004) Establishing an effi -cient Ac/Ds tagging system in rice: large-scale analysis of Ds fl anking sequences. Plant J 37:301-314. (Pubitemid 38106614)
14. Greco R, et al. (2004) Transcription and somatic transposition of the maize En/Spm transposon system in rice. Mol Genet Genomics 270:514-523. (Pubitemid 38202264)
15. Jeon JS et al. (2000) T-DNA insertional mutagenesis for functional genomics in rice. The Plant J 22:561-570.
16. Jeong DH, et al. (2002) T-DNA insertional mutagenesis for activation tagging in rice. Plant Physiol 130:1636-1644.
17. Enoki H, et al. (1999) Ac as a tool for the functional genomics of rice. Plant J 19:605-613.
18. Nakagawa Y, et al. (2000) Frequency and pattern of transposition of the maize transposable element Ds in transgenic rice plants. Plant Cell Physiol 41:733-742. (Pubitemid 30454051)
19. van Enckevort LJ, et al. (2005) EU-OSTID: a collection of transposon insertional mutants for functional genomics in rice. Plant Mol Biol 59:99-110. (Pubitemid 41430488)
20. O'Keefe DP et al. (1994) Plant Expression of a Bacterial Cytochrome P450 That Catalyzes Activation of a Sulfonylurea Pro-Herbicide. Plant Physiol 105:473-482.
21. Tissier AF, et al. (1999) Multiple independent defective suppressor-mutator transposon insertions in Arabidopsis: a tool for functional genomics. Plant Cell 11:1841-1852.
22. Jiang SY, et al. (2007) Ds insertion mutagenesis as an effi cient tool to produce diverse variations for rice breeding. Plant Mol Biol 65:385-402.
23. Luan WJ, et al. (2008) An effi cient fi eld screening procedure for identifying transposants for constructing an Ac/Ds-based insertionalmutant library of rice. Genome 51:41-49.
24. Izawa T, et al. (1997) Transposon tagging in rice. Plant Mol Biol 35219-229.
25. Johnson AA, et al. (2005) Spatial control of transgene expression in rice (Oryza sativa L.) using the GAL4 enhancer trapping system. Plant J 41:779-789. (Pubitemid 40336008)
26. Sallaud C, et al. (2004) High throughput T-DNA insertion mutagenesis in rice: a fi rst step towards in silico reverse genetics. Plant J 39:450-464. (Pubitemid 39040149)
27. Chen M, et al. (2002) An integrated physical and genetic map of the rice genome. The Plant Cell 14:537-545. (Pubitemid 34299663)
28. Zhao Q, et al (2002) A fi ne physical map of the rice chromosome 4. Genome Research 12:817-823. (Pubitemid 34546469)
29. Healy J, et al. (1993) Linked and unlinked transposition of a genetically marked Dissociation element in transgenic tomato. Genetics 134:571-584. (Pubitemid 23156952)
30. Dooner HK, et al. (1994) Distribution of unlinked receptor sites for transposed Ac elements from the bz-m2(Ac) allele in maize. Genetics 136:261-279. (Pubitemid 24016692)