Assessing variability in root traits of wild Lupinus angustifolius germplasm: Basis for modelling root system structure

Plant and Soil

Volumn 354, Issue 1-2, 2012, Pages 141-155

  Chen, Ying Long ^a   Dunbabin, Vanessa M ^b   Diggle, Art J ^c   Siddique, Kadambot H M ^a   Rengel, Zed ^a  

^a UNIVERSITY OF WESTERN AUSTRALIA   (Australia)

^b UNIVERSITY OF TASMANIA   (Australia)

^c DEPARTMENT OF AGRICULTURE AND FOOD WESTERN AUSTRALIA   (Australia)

Author keywords

Lupinus angustifolius; Phenotyping; Root modelling; Root system architecture; Root traits; Variation; Wild genotype

Indexed keywords

ARRAY; ASSESSMENT METHOD; DOMESTICATION; ECOLOGICAL MODELING; FUNCTIONAL MORPHOLOGY; GENETIC MARKER; GENETIC VARIATION; GENOTYPE; GERMPLASM; HERB; INTRASPECIFIC VARIATION; PHENOTYPE; PRINCIPAL COMPONENT ANALYSIS; ROOT ARCHITECTURE; ROOT SYSTEM; WILD POPULATION;

LUPINUS ANGUSTIFOLIUS;

EID: 84860183337     PISSN: 0032079X     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11104-011-1050-1     Document Type: Article

References (53)

1. Ao J, Fu AJ, Tian J, Yan X, Liao H (2010) Genetic variability for root morph-architecture traits and root growth dynamics as related to phosphorus efficiency in soybean. Funct Plant Biol 37: 304-312.
2. Berger JD, Adhikari KN, Wilkinson D, Buirchell BJ, Sweetingham MW (2008) Ecogeography of the Old World lupins 1 ecotypic variation in yellow lupin (Lupinus luteus L). Aust J Agric Res 59: 691-701.
3. Bishop A, Delane R, Hamblin J (1986) Root characteristics in branching and reduced branching lupins. In: Proceedings of 4th International Lupin Conference, 15-22 August, 1986. Geraldton, Western Australian. International Lupin Association, Canterbury, New Zealand, pp. 313.
4. Buirchell BJ (2008) Narrow-leafed lupin breeding in Australia-Where to from here? In: Palta JA, Berger JB (eds) Lupins for Health and Wealth-Proceedings of the 12th International Lupin Conference. 14-18 Sept. 2008, Fremantle, Western Australia. International Lupin Association, Canterbury, pp 226-230.
5. Byrne F, Robertson MJ, Bathgate A, Hoque Z (2010) Factors influencing potential scale of adoption of a perennial pasture in a mixed crop-livestock farming system. Agric Syst 103: 453-462.
6. Casson SA, Lindsey K (2003) Genes and signalling in root development. New Phytol 158: 11-38.
7. Chen YL, Dunbabin VM, Diggle AJ, Siddique KHM, Rengel Z (2011a) Development of a novel semi-hydroponic phenotyping system for studying root architecture. Funct Plant Biol 38: 355-363.
8. Chen YL, Dunbabin VM, Postma J, Diggle AJ, Lynch JP, Siddique KHM, Rengel Z (2011b) Phenotypic variation and modelling of wild Lupinus angustifolius germplasm. Plant Soil 348: 345-364. doi: 10. 1007/s11104-011-0939-z.
9. Clements JC, Cowling WA (1994) Patterns of morphological diversity in relation to geographical origins of wild Lupinus angustifolius from the Aegean region. Gen Resour Crop Evol 41: 109-122.
10. Clements JC, White PF, Buirchell BJ (1993) The root morphology of Lupinus angustifolius in relation to other Lupinus species. Aust J Agric Res 44: 1367-1375.
11. Comas LH, Eissenstat DE (2009) Patterns in root trait variation among 25 co-existing North American forest species. New Phytol 182: 919-928.
12. de Dorlodot S, Forster B, Pagès L, Price A, Tuberosa R, Draye X (2007) Root system architecture, opportunities and constraints for genetic improvement of crops. Trends Plant Sci 12: 474-481.
13. Diggle AJ (1988) ROOTMAP-a model in three-dimensional co-ordinates of the growth and structure of fibrous root systems. Plant Soil 105: 169-178.
14. Dracup M, Thomson B (2000) Narrow-leafed lupins with restricted branching. Ann Bot 85: 29-35.
15. Dunbabin VM (2007) Simulating the role of rooting traits in crop-weed competition. Field Crop Res 104: 44-51.
16. Dunbabin VM, Rengel Z, Diggle A (2001) Lupinus angustifolius has a plastic uptake response to heterogeneously supplied nitrate while Lupinus pilosus does not. Aust J Agric Res 52: 505-512.
17. Dunbabin VM, Diggle AJ, Rengel Z, van Hugten R (2002) Modelling the interactions between water and nutrient uptake and root growth. Plant Soil 239: 19-38.
18. Dunbabin VM, Diggle AJ, Rengel Z (2003) Is there an optimal root architecture for nitrate capture in leaching environments? Plant Cell Environ 26: 835-844.
19. Eissenstat DM, Wells CE, Yanai RD, Whitbeck JL (2000) Building roots in a changing environment, implications for root longevity. New Phytol 147: 33-42.
20. Giuliani S, Sanguineti MC, Tuberosa R, Bellotti M, Salvi S, Laudi P (2005) Root-ABA1, a major constitutive QTL, affects maize root architecture and leaf ABA concentration at different water regimes. J Exp Bot 56: 3061-3070.
21. Gladstones JS (1974) Lupins of the Mediterranean region and Africa. West Aust Depart Agr Tech Bull 26: 1-48.
22. Gregory PJ, Bengough AG, Grinev D, Schmidt S, Thomas WTB, Wojciechowski T, Young IM (2009) Root phenomics of crops, opportunities and challenges. Funct Plant Biol 36: 922-929.
23. Hammer GL, Dong Z, McLean G, Doherty A, Messina C, Schussler J, Zinselmeier C, Paszkiewicz S, Cooper M (2009) Can changes in canopy and/or root system architecture explain historical maize yield trends in the US corn belt? Crop Sci 49: 299-312.
24. Hodge A (2010) Roots, the acquisition of water and nutrients from the heterogeneous soil environment. Prog Bot 71: 307-337.
25. Hodge A, Berta G, Doussan C, Merchan F, Crespi M (2009) Plant root growth, architecture and function. Plant Soil 321: 153-187.
26. Horii H, Nemoto K, Miyamoto N, Harada J (2005) Quantitative trait loci for adventitious and lateral roots in rice. Plant Breed 125: 198-200.
27. Jolliffe IT (2002) Principal component analysis, 2nd edn. Springer, New York.
28. López-Bucio J, Cruz-Ramírez A, Herrera-Estrella L (2003) The role of nutrient availability in regulating root architecture. Curr Opin Plant Biol 6: 280-287.
29. Lynch J (1995) Root architecture and plant productivity. Plant Physiol 109: 7-13.
30. Lynch JP, Brown KM (2001) Topsoil foraging-an architectural adaptation of plants to low phosphorus availability. Plant Soil 237: 225-237.
31. Lynch J, Nielsen K, Davis R, Jablokow A (1997) Simroot, modeling and visualization of botanical root systems. Plant Soil 188: 139-151.
32. Manschadi AM, Hammer GL, Christopher JT, de Voil P (2008) Genotypic variation in seedling root architectural traits and implications for drought adaptation in wheat (Triticum aestivum L.). Plant Soil 303: 115-129.
33. Manske GGB, Ortiz-Monasterio JI, Ginkel MV, González RM, Rajaram S, Molina E, Vlek PLG (2000) Traits associated with improved P-uptake efficiency in CIMMYT's semi-dwarf spring bread wheat grown on an acid Andisol in Mexico. Plant Soil 221: 189-204.
34. Merrill SD, Tanaka DL, Hanson JD (2002) Root length growth of eight crop species in Haplustoll soils. Soil Sci Soc Am J 63: 913-923.
35. Nelson MN, Moolhuijzen PM, Boersma JG, Chudy M, Lesniewska K, Bellgard M, Oliver RP, Swiecicki W, Wolko B, Cowling WA, Ellwood SR (2010) Aligning a new reference genetic map of Lupinus angustifolius with the genome sequence of the model legume, Lotus japonicus. DNA Res 17: 73-83.
36. Nibau C, Gibbs DJ, Coates JC (2008) Branching out in new directions, the control of root architecture by lateral root formation. New Phytol 179: 595-614.
37. Nielsen KL, Lynch JP, Weiss HN (1997) Fractal geometry of bean root systems, correlations between spatial and fractal dimension. Am J Bot 84: 26-33.
38. Nielsen KL, Eshel A, Lynch JP (2001) The effect of phosphorus availability on the carbon economy of contrasting common bean (Phaseolus vulgaris L.) genotypes. J Exp Biol 52: 329-339.
39. Ostonen I, Püttsepp Ü, Biel C, Alberton O, Bakker MR, Lõhmus K, Majdi H, Metcalfe D, Olsthoorn AFM, Pronk A, Vanguelova E, Weih M, Brunner I (2007) Specific root length as an indicator of environmental change. Plant Biosystems 141: 426-442.
40. Palta JA, Berger JD, Ludwig C (2008) The growth and yield of narrow leafed lupin, myths and realities. In: Palta JA, Berger JB (eds) Lupins for Health and Wealth -Proceedings of the 12th International Lupin Conference, 14-18 September, 2008, Fremantle, Western Australia. International Lupin Association, Canterbury, pp 20-25.
41. Probert ME, Dimes JP, Keating BA, Dalal RC, Strong WM (1998) APSIM's water and nitrogen modules and simulation of the dynamics of water and nitrogen in fallow systems. Agr Syst 56: 1-28.
42. Rengel Z, Damon PM (2008) Crops and genotypes differ in efficiency of potassium uptake and use. Physiol Plant 133: 624-636.
43. Römer W, Kang DK, Egle K, Gerke J, Keller H (2000) The acquisition of cadmium by Lupinus albus L., Lupinus angustifolius L., and Lolium multiflorum Lam. J Plant Nutr Soil Sc 163: 623-628.
44. Rose CW, Chichester FW, Williams JR, Ritchie JT (1982) A contribution to simplified models of field solute transport. J Environ Qual 11: 146-150.
45. Rose TJ, Rengel Z, Ma Q, Bowden JW (2009) Crop species differ in root plasticity response to localised P supply. J Plant Nutr Soil Sc 172: 360-368.
46. Sergeeva LI, Keurentjes JJB, Bentsink L, Vonk J, van der Plas LHW, Koornneef M, Vreugdenhil D (2006) Vacuolar invertase regulates elongation of Arabidopsis thaliana roots as revealed by QTL and mutant analysis. Proc Natl Acad Sc U S A 103: 2994-2999.
47. Steele KA, Virk DS, Kumar R, Prasad SC, Witcombe JR (2007) Field evaluation of upland rice lines selected for QTLs controlling root traits. Field Crop Res 101: 180-186.
48. Tabachnik BG, Fidell LS (1996) Using multivariate statistics. Harper Collins, New York.
49. Tang C, Robson AD (1998) Correlation between soil pH of collection site and the tolerance of wild genotypes of Lupinus angustifolius L. to neutral pH. Aust J Exp Agric 38: 355-362.
50. Walk TC, Jaramillo P, Lynch JP (2006) Architectural tradeoffs between adventitious and basal roots for phosphorus acquisition. Plant Soil 279: 347-366.
51. Weih M, Rönnberg-Wästljung A, Glynn C (2006) Genetic basis of phenotypic correlations among growth traits in hybrid willow (Salix dasyclados × S. viminalis) grown under two water regimes. New Phytol 170: 467-477.
52. Yuan H, Yan G, Siddique KHM, Yang H (2005) RAMP based fingerprinting and assessment of relationships among Australian narrow-leafed lupin (Lupinus angustifolius L.) cultivars. Aust J Agric Res 56: 1339-1346.
53. Zhu J, Zhang C, Lynch JP (2010) The utility of phenotypic plasticity of root hair length for phosphorus acquisition. Funct Plant Biol 37: 313-322.