Occurrence and incidence of phytoplasmas of the 16SrII-D subgroup on solanaceous and cucurbit crops in Egypt

European Journal of Plant Pathology

Volumn 133, Issue 2, 2012, Pages 353-360

  Omar, Ayman F ^a   Foissac, Xavier ^b,c  

^a Kafrelsheikh University   (Egypt)

^b Univ Bordeaux   (France)

^c UNIVERSITÉ DE BORDEAUX   (France)

Author keywords

Cucurbit; Eggplant; Phloem restricted bacteria; Tomato

Indexed keywords

BACTERIUM; DEVELOPMENTAL BIOLOGY; DISEASE PREVALENCE; EPIDEMIC; FRUIT; GENETIC ANALYSIS; HOST PLANT; HOST RANGE; HOST-PARASITE INTERACTION; INFECTIVITY; PHLOEM; PHYLOGENETICS; PHYTOPLASMA; POLYMERASE CHAIN REACTION; POPULATION DISTRIBUTION; RESEARCH; RESERVOIR; WILD POPULATION;

EGYPT;

BACTERIA (MICROORGANISMS); CANDIDATUS PHYTOPLASMA; HEXAPODA; LYCOPERSICON ESCULENTUM; SOLANUM MELONGENA;

EID: 84860116544     PISSN: 09291873     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10658-011-9908-x     Document Type: Article

References (53)

1. Al-Subhi, A. M., Al-Saady, N. A., Khan, A. J., & Deadman, M. L. (2011). First Report of a Group 16SrII Phytoplasma Associated with Witches'-Broom of Eggplant in Oman. Plant Disease, 95, 360.
2. Altschul, S. F., Madden, T. L., AA, Schaffer, Zhang, J., Zhang, Z., Miller, W., & Lipman, D. J. (1997). Gapped BLAST (Basic Local Alignment Search Tool) and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Research, 25, 3389-3402.
3. Amaral-Mello, A. P. O., Eckstein, B., Flôres, D., Kreyci, P. F., and Bedendo, I. P. (2010) Identification by computer-simulated RFLP of phytoplasmas associated with eggplant giant calyx representative of two subgroups, a lineage of 16SrIII-J and the new subgroup 16SrIII-U International Journal of Systematic and Evolutionary Microbiology In press.
4. Anfoka, G. H. A., Khalil, A. B., & Fattash, I. (2003). Detection and molecular characterization of a phytoplasma associated with big bud disease of tomatoes in Jordan. Journal of Phytopathology, 151, 223-227.
5. Arocha, Y., Antesana, O., Montellano, E., Franco, P., Plata, G., & Jones, P. (2007). 'Candidatus Phytoplasma lycopersici', a phytoplasma associated with 'hoja de perejil' disease in Bolivia. International Journal of Systematic and Evolutionary Microbiology, 57, 1704-1710.
6. Blancard, D. (2009) Les maladies de la tomate: Quae Editions, France.
7. Boiteux, L. S., Lima, M. I., & Kitajima, E. W. (1994). Giant calyx - a disease of eggplant (Solanum melongena) associated with a mycoplasma-like organism in Brazil. Plant Pathology, 43, 751-754.
8. Bonfield, J. K., Smith, K. F., & Staden, R. (1995). A new DNA sequence assembly program. Nucleic Acids Research, 24, 4992-4999.
9. Choueiri, E., Salar, P., Jreijiri, F., El-Zammar, S., Massaad, R., Abdul-Nour, H., et al. (2007). Occurrence and distribution of 'Candidatus Phytoplasma trifolii' associated with diseases of solanaceous crops in Lebanon. European Journal of Plant Pathology, 118, 411-416.
10. Cousin, M. T., & Abadie, M. (1982). Action des mycoplasmes sur l'anthère. Etude en microscopies photonique et électronique. Revue de Cytologie, de Biologie Végétale et de Botanique, 5, 41-57.
11. Cousin, M. T., Dafalla, G., Demazeau, E., Theveu, E., & Grosclaude, J. (1989). In situ detection of MLOs for Solanaceae stolbur and faba bean phyllody by indirect immunofluorescence. Journal of Phytopathology, 124, 71-79.
12. Davis, R. I., Schneider, B., & Gibb, K. (1997). Detection and differentiation of phytoplasmas in Australia. Australian Journal of Agricultural Research, 48, 535-544.
13. Deng, S. J., & Hiruki, C. (1991). Amplification of 16S ribosomal-RNA genes from culturable and nonculturable mollicutes. Journal of Microbiological Methods, 14, 53-61.
14. El-Banna, M. Om-Hashem & El-Deep, S. H. (2007). Phytoplasma associated with Mango malformation disease in Egypt. Egyptian Journal of Phytopathology, 35, 141-153.
15. Firrao, G., Andersen, M., Bertaccini, A., Boudon Padieu, E., Bové, J. M., Daire, X., et al. (2004). 'Candidatus Phytoplasma', a taxon for the wall-less, non-helical prokaryotes that colonize plant phloem and insects. International Journal of Systematic and Evolutionary Microbiology, 54, 1243-1255.
16. Garnier, M. (2000). The stolbur phytoplasma: an ubiquitous agent. Comptes Rendus de l'Academie d'Agriculture de France, 86, 27-33.
17. Gundersen, D. E., & Lee, I.-M. (1996). Ultrasensitive detection of phytoplasmas by nested-PCR assays using two universal primer pairs. Phytopathologia Mediterranea, 35, 114-151.
18. Gundersen, D. E., Lee, I. M., Rehner, S. A., Davis, R. E., & Kingsbury, D. T. (1994). Phylogeny of mycoplasmalike organisms (phytoplasmas): a basis for their classification. Journal of Bacteriology, 176, 5244-5254.
19. Hiruki, C., & Wang, K. (2004). Clover proliferation phytoplasma: 'Candidatus Phytoplasma trifolii'. International Journal of Systematic and Evolutionary Microbiology, 54, 1349-1353.
20. Jarausch, W., Jarausch-Wehrheim, B., Danet, J. L., Broquaire, J. M., Dosba, F., Saillard, C., & Garnier, M. (2001). Detection and identification of European stone fruit yellows and other phytoplasmas in wild plants in the surroundings of apricot chlorotic leaf roll-affected orchards in southern France. European Journal of Plant Pathology, 107, 209-217.
21. Kelly, P. L., Arocha, Y., and Dider, S. Z. (2009) First report of a 16SrI, 'Candidatus Phytoplasma asteris' isolate affecting eggplant and Mikania sp. in Bangladesh. New Disease Reports 18: 52.
22. Khan, A. J., Botti, S., Al-Subhi, A. M., Gundersen-Rindal, D. E., & Bertaccini, A. F. (2002). Molecular identification of a new phytoplasma associated with alfalfa witches'-broom in Oman. Phytopathology, 92, 1038-1047.
23. Lee, I. M., & Davis, R. E. (1992). Mycoplasmas which infect plants and insects. In J. Maniloff, R. N. McElhaney, L. R. Finch & J. B. Baseman (Eds.), Mycoplasmas: Molecular Biology and Pathogenesis (pp. 379-390). American Society of Microbiology: Washington, D. C.
24. Lee, L. M., Hammond, R. W., Davis, R. E., & Gundersen, D. E. (1993). Universal amplification and analysis of pathogen 16S rDNA for classification and identification of mycoplasmalike organisms. Phytopathology, 83, 834-842.
25. Lee, I. M., Davis, R. E., & Gundersen-Rindal, D. E. (2000). Phytoplasma: phytopathogenic mollicutes. Annual Review of Microbiology, 54, 221-255.
26. Lee, I. M., Zhao, Y., Davis, R. E., Wei, W., & Martini, M. (2007). Prospects of DNA-based systems for differenciation and classification of phytoplasmas. Bulletin of Insectology, 60, 239-244.
27. Maixner, M., Ahrens, U., & Seemuller, E. (1995). Detection of the German grapevine yellows (Vergilbungskrankheit) MLO in grapevine, alternative hosts and a vector by a specific PCR procedure. European Journal of Plant Pathology, 101, 241-250.
28. McCoy, R. E., Caudwell, A., Chang, C. J., Chen, T. A., Chiykowski, L. N., Cousin, M. T., et al. (1989). Plant diseases associated with mycoplasma-like organisms. In R. F. Whitcomb & J. G. Tully (Eds.), The Mycoplasmas (pp. 545-640). New York: Academic.
29. Mitra, D. K. (1988). Little leaf disease of eggplant. In K. Maramorosch & S. P. Raychaudhuri (Eds.), Mycoplasma disease of crops (pp. 343-348). New York: Springer.
30. Montano, H. G., Davis, R. E., Dally, E. L., Pimentel, J. P., & Brioso, P. S. T. (2000). Identification and phylogenetic analysis of a new phytoplasma from diseased chayote in Brazil. Plant Disease, 84, 429-436.
31. Montano, H. G., Davis, R. E., Dally, E. L., Hogenhout, S., Pimentel, J. P., & Brioso, P. S. (2001). 'Candidatus Phytoplasma brasiliense', a new phytoplasma taxon associated with hibiscus witches' broom disease. International Journal of Systematic & Evolutionary Microbiology, 51, 1109-1118.
32. Montano, H. G., Brioso, P. S. T., Pimentel, J. P., Figueiredo, D. V., & Cunha, J. O. (2006). Cucurbita moschata, new phytoplasma host in Brazil. Journal of Plant Pathology, 88, 226-226.
33. Montano, H. G., Paulo, S. T. B., Roberta, C. P., & Joao, P. P. (2007). Sicana odorifera (Cucurbitaceae) a new phytoplasma host. Bulletin of Insectology, 60, 287-288.
34. Omar, A. F., Emeran, A. A., & Abass, J. M. (2008). Detection of Phytoplasma associated with periwinkle virescence in Egypt. Plant Pathology Journal, 7, 92-97.
35. Pearce, T., Scott, J., and Pethybridge, S. J. (2011) First Report of a 16SrII-D Subgroup Phytoplasma Associated with Pale Purple Coneflower Witchs'-Broom Disease in Australia. Plant Disease in press.
36. Pracros, P., Renaudin, J., Eveillard, S., Mouras, A., & Hernould, M. (2006). Tomato flower abnormalities induced by stolbur phytoplasma infection are associated with changes of expression of floral development genes. Molecular Plant-Microbe Interactions, 19, 62-68.
37. Saeed, E. M., Roux, J., & Cousin, M. T. (1993). Studies of polyclonal antibodies for the detection of MLOs associated with faba bean (Vicia faba L) using different Elisa methods and dot-blot. Journal of Phytopathology-Phytopathologische Zeitschrift, 137, 33-43.
38. Saeed, E., Seemüller, E., Schneider, B., Saillard, C., Blanchard, B., Bertheau, Y., & Cousin, M. T. (1994). Molecular-cloning, detection of chromosomal DNA of the mycoplasmalike organism (MLO) associated with faba bean (Vicia-faba L) phyllody by southern blot hybridization and the polymerase chain-reaction (PCR). Journal of Phytopathology-Phytopathologische Zeitschrift, 142, 97-106.
39. Schneider, B., Seemüller, E., Smart, C. D., & Kirkpatrick, B. C. (1995a). Phylogenetic classification of plant pathogenic mycoplasmalike organisms or phytoplasmas. In S. Razin & J. G. Tully (Eds.), Molecular and diagnostic procedures in mycoplasmology (pp. 369-380). San Diego, CA: Academic.
40. Schneider, B., Cousins, M. T., Klinkong, S., & Seemüller, E. (1995b). Taxonomic Relatedness and Phylogenetic Positions of Phytoplasmas Associated with Diseases of Faba Bean, Sunnhemp, Sesame, Soybean, and Eggplant. Journal of Plant Diseases and Protection, 102, 225-232.
41. Schneider, B., Padovan, A., De la Rue, S., Eichner, R., Davis, R., Bernuetz, A., & Gibb, K. (1999). Detection and differentiation of phytoplasmas in Australia: an update. Australian Journal of Agricultural Research, 50, 333-342.
42. Seemüller, E., Schneider, B., Mäurer, R., Ahrens, U., Daire, X., Kison, H., et al. (1994). Phylogenetic classification of phytopathogenic mollicutes by sequence analysis of 16S ribosomal DNA. International Journal of Systematic Bacteriology, 44, 440-446.
43. Sertkaya, G., Martini, M., Musetti, R., & Osler, R. (2007). Detection and molecular characterization of phytoplasmas infecting sesame and solanaceous crops in Turkey. Bulletin of Insectology, 60, 141-142.
44. Shaw, M. E., Kirkpatrick, B. C., & Golino, D. A. (1993). The beet leafhopper-transmitted virescence agent causes tomato big bud disease in California. Plant Disease, 77, 290-295.
45. Siddique, A. B. M., Agrawal, G. K., Alam, N., & Krishna Reddy, M. (2001). Electron microscopy and molecular characterization of phytoplasmas associated with little leaf disease of brinjal (Solanum melongena L.) and periwinkle (Catharanthus roseus) in Bangladesh. Journal of Phytopathology, 149, 237-244.
46. Streten, C., Conde, B., Herrington, M., Moulden, J., & Gibb, K. (2005). "Candidatus Phytoplasma australiense" is associated with pumpkin yellow leaf curl disease in Queensland, Western Australia and the Northern territory. Australian Plant Pathology, 34, 103-105.
47. Tamura, K., Dudley, J., Nei, M., & Kumar, S. (2007). MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4. 0. Molecular Biology and Evolution, 24, 1596-1599.
48. Thompson, J. D., Higgins, D. G., & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research, 22, 4673-4680.
49. Wei, W., Davis, R. E., Lee, I. M., & Zhao, Y. (2007). Computer simulated RFLP analysis of 16S rRNA genes: identification of ten new phytoplasma groups. International Journal of Systematic & Evolutionary Microbiology, 57, 1855-1867.
50. Weintraub, P. G., & Beanland, L. (2006). Insect vectors of phytoplasmas. Annual Review of Entomology, 51, 91-111.
51. White, D. T., Billington, S. J., Walsh, K. B., & Scott, P. T. (1997). DNA sequence analysis supports the association of phytoplasmas with papaya (Carica papaya) dieback, yellow crinkle and mosaic. Australasian Plant Pathology, 26, 28-36.
52. White, D. T., Blackall, L. L., Scott, P. T., & Walsh, K. B. (1998). Phylogenetic positions of phytoplasmas associated with dieback, yellow crinkle and mosaic diseases of papaya, and their proposed inclusion in 'Candidatus Phytoplasma australiense' and a new taxon', Candidatus Phytoplasma australasia'. International Journal of Systematic Bacteriology, 48, 941-951.
53. Zreik, L., Carle, P., Bové, J. M., & Garnier, M. (1995). Characterization of the mycoplasmalike organism associated with witches-broom disease of lime and proposition of a Candidatus taxon for the organism, Candidatus Phytoplasma aurantifolia. International Journal of Systematic Bacteriology, 45, 449-453.