-
1
-
-
0037050026
-
Functional organization of the yeast proteome by systematic analysis of protein complexes
-
Gavin AC, BoscheMet al (2002) Functional organization of the yeast proteome by systematic analysis of protein complexes. Nature 415(6868): 141-147
-
(2002)
Nature
, vol.415
, Issue.6868
, pp. 141-147
-
-
Gavin, A.C.1
Al, B.2
-
2
-
-
0037050004
-
Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry
-
DOI 10.1038/415180a
-
Ho Y, Gruhler A et al (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature 415(6868): 180-183 (Pubitemid 34059520)
-
(2002)
Nature
, vol.415
, Issue.6868
, pp. 180-183
-
-
Ho, Y.1
Gruhler, A.2
Heilbut, A.3
Bader, G.D.4
Moore, L.5
Adams, S.-L.6
Millar, A.7
Taylor, P.8
Bennett, K.9
Boutilier, K.10
Yang, L.11
Wolting, C.12
Donaldson, I.13
Schandorff, S.14
Shewnarane, J.15
Vo, M.16
Taggart, J.17
Goudreault, M.18
Muskat, B.19
Alfarano, C.20
Dewar, D.21
Lin, Z.22
Michalickova, K.23
Willems, A.R.24
Sassi, H.25
Nielsen, P.A.26
Rasmussen, K.J.27
Andersen, J.R.28
Johansen, L.E.29
Hansen, L.H.30
Jespersen, H.31
Podtelejnikov, A.32
Nielsen, E.33
Crawford, J.34
Poulsen, V.35
Sorensen, B.D.36
Matthiesen, J.37
Hendrickson, R.C.38
Gleeson, F.39
Pawson, T.40
Moran, M.F.41
Durocher, D.42
Mann, M.43
Hogue, C.W.V.44
Figeys, D.45
Tyers, M.46
more..
-
3
-
-
0041312697
-
Diversity of protein-protein interactions
-
DOI 10.1093/emboj/cdg359
-
Nooren IM, Thornton JM (2003) Diversity of protein-protein interactions. EMBO J 22(14): 3486-3492 (Pubitemid 36898326)
-
(2003)
EMBO Journal
, vol.22
, Issue.14
, pp. 3486-3492
-
-
Nooren, I.M.A.1
Thornton, J.M.2
-
4
-
-
77957771797
-
Transient protein-protein interactions: Structural, functional, and network properties
-
Perkins JR, Diboun I et al (2010) Transient protein-protein interactions: structural, functional, and network properties. Structure 18(10): 1233-1243
-
(2010)
Structure
, vol.18
, Issue.10
, pp. 1233-1243
-
-
Perkins, J.R.1
Diboun, I.2
-
5
-
-
8444232122
-
Transient complexes of redox proteins: Structural and dynamic details from NMR studies
-
DOI 10.1002/jmr.686
-
Prudencio M, Ubbink M (2004) Transient complexes of redox proteins: structural and dynamic details from NMR studies. J Mol Recognit 17(6): 524-539 (Pubitemid 39484220)
-
(2004)
Journal of Molecular Recognition
, vol.17
, Issue.6
, pp. 524-539
-
-
Prudencio, M.1
Ubbink, M.2
-
6
-
-
73249139292
-
The structural analysis of protein-protein interactions by NMR spectroscopy
-
O'Connell MR, Gamsjaeger R et al (2009) The structural analysis of protein-protein interactions by NMR spectroscopy. Proteomics 9(23): 5224-5232
-
(2009)
Proteomics
, vol.9
, Issue.23
, pp. 5224-5232
-
-
O'connell, M.R.1
Gamsjaeger, R.2
-
7
-
-
0034919312
-
Protein-protein interactions probed by nuclear magnetic resonance spectroscopy
-
DOI 10.1016/S0076-6879(01)39323-0
-
Qin J, Vinogradova O et al (2001) Protein-protein interactions probed by nuclear magnetic resonance spectroscopy. Meth Enzymol 339: 377-389 (Pubitemid 32666570)
-
(2001)
Methods in Enzymology
, vol.339
, pp. 377-389
-
-
Qin, J.1
Vinogradova, O.2
Gronenborn, A.M.3
-
8
-
-
0037039335
-
Mapping protein-protein interactions in solution by NMR spectroscopy
-
DOI 10.1021/bi011870b
-
Zuiderweg ER (2002) Mapping protein-protein interactions in solution by NMR spectroscopy. Biochemistry 41(1): 1-7 (Pubitemid 34049375)
-
(2002)
Biochemistry
, vol.41
, Issue.1
, pp. 1-7
-
-
Zuiderweg, E.R.P.1
-
10
-
-
0031933143
-
Determining the structures of large proteins and protein complexes by NMR
-
DOI 10.1016/S0167-7799(97)01135-9
-
Clore GM, Gronenborn AM (1998) Determining the structures of large proteins and protein complexes by NMR. Trends Biotechnol 16(1): 22-34 (Pubitemid 28064815)
-
(1998)
Trends in Biotechnology
, vol.16
, Issue.1
, pp. 22-34
-
-
Clore, G.M.1
Gronenborn, A.M.2
-
12
-
-
0030612833
-
Attenuated T2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution
-
Pervushin K, Riek R et al (1997) Attenuated T2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution. Proc Natl Acad Sci USA 94(23): 12366-12371
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, Issue.23
, pp. 12366-12371
-
-
Pervushin, K.1
Riek, R.2
-
13
-
-
0037743516
-
Structural and functional insights into PINCH LIM4 domain-mediated integrin signaling
-
DOI 10.1038/nsb938
-
Velyvis A, Vaynberg J et al (2003) Structural and functional insights into PINCH LIM4 domain-mediated integrin signaling. Nat Struct Biol 10(7): 558-564 (Pubitemid 36792908)
-
(2003)
Nature Structural Biology
, vol.10
, Issue.7
, pp. 558-564
-
-
Velyvis, A.1
Vaynberg, J.2
Yang, Y.3
Vinogradova, O.4
Zhang, Y.5
Wu, C.6
Qin, J.7
-
14
-
-
0035859886
-
Mapping the interactions between flavodoxin and its physiological partners flavodoxin reductase and cobalamin-dependent methionine synthase
-
DOI 10.1073/pnas.171168898
-
Hall DA, Vander Kooi CW et al (2001) Mapping the interactions between flavodoxin and its physiological partners flavodoxin reductase and cobalamin-dependent methionine synthase. Proc Natl Acad Sci USA 98(17): 9521-9526 (Pubitemid 32769336)
-
(2001)
Proceedings of the National Academy of Sciences of the United States of America
, vol.98
, Issue.17
, pp. 9521-9526
-
-
Hall, D.A.1
Vander Kooi, C.W.2
Stasik, C.N.3
Stevens, S.Y.4
Zuiderweg, E.R.P.5
Matthews, R.G.6
-
16
-
-
0000393431
-
The two-dimensional transferred nuclear Overhauser effect
-
Clore GM, Gronenborn AM (1982) The two-dimensional transferred nuclear Overhauser effect. J Magn Reson 48: 402-417
-
(1982)
J Magn Reson
, vol.48
, pp. 402-417
-
-
Clore, G.M.1
Gronenborn, A.M.2
-
17
-
-
0030808350
-
Methods for measurement of intermolecular NOEs by multinuclear NMR spectroscopy: Application to a bacterio-phage l N-peptide/boxB RNA complex
-
Zwahlen C, Legault P et al (1997) Methods for measurement of intermolecular NOEs by multinuclear NMR spectroscopy: application to a bacterio-phage l N-peptide/boxB RNA complex. J Am Chem Soc 119: 711-721
-
(1997)
J Am Chem Soc
, vol.119
, pp. 711-721
-
-
Zwahlen, C.1
Legault, P.2
-
18
-
-
13944249955
-
Structure of an ultraweak protein-protein complex and its crucial role in regulation of cell morphology and motility
-
DOI 10.1016/j.molcel.2004.12.031
-
Vaynberg J, Fukuda T et al (2005) Structure of an ultraweak protein-protein complex and its crucial role in regulation of cell morphology and motility. Mol Cell 17(4): 513-523 (Pubitemid 40269116)
-
(2005)
Molecular Cell
, vol.17
, Issue.4
, pp. 513-523
-
-
Vaynberg, J.1
Fukuda, T.2
Chen, K.3
Vinogradova, O.4
Velyvis, A.5
Tu, Y.6
Ng, L.7
Wu, C.8
Qin, J.9
-
19
-
-
0001050734
-
A simple method to distinguish intermonomer nuclear Overhauser effects in homodimeric proteins with C2 symmetry
-
Walters KJ, Matsuo H et al. (1997) A simple method to distinguish intermonomer nuclear Overhauser effects in homodimeric proteins with C2 symmetry. J Am Chem Soc 119: 5958-5959
-
(1997)
J Am Chem Soc
, vol.119
, pp. 5958-5959
-
-
Walters, K.J.1
Matsuo, H.2
-
20
-
-
0034919243
-
Dipolar couplings in macromolecular structure determination
-
DOI 10.1016/S0076-6879(01)39313-8
-
Bax A, Kontaxis G et al (2001) Dipolar couplings in macromolecular structure determination. Meth Enzymol 339: 127-174 (Pubitemid 32666560)
-
(2001)
Methods in Enzymology
, vol.339
, pp. 127-174
-
-
Bax, A.1
Kontaxis, G.2
Tjandra, N.3
-
21
-
-
4344648452
-
Residual dipolar couplings in structure determination of biomolecules
-
Prestegard JH, Bougault CM et al (2004) Residual dipolar couplings in structure determination of biomolecules. Chem Rev 104(8): 3519-3540
-
(2004)
Chem Rev
, vol.104
, Issue.8
, pp. 3519-3540
-
-
Prestegard, J.H.1
Bougault, C.M.2
-
23
-
-
0032517327
-
Measurement of residual dipolar couplings of macromolecules aligned in the nematic phase of a colloidal suspension of rod-shaped viruses [15]
-
DOI 10.1021/ja982592f
-
Clore GM, Starich MR et al. (1998) Measurement of residual dipolar couplings of macromolecules aligned in the nematic phase of a colloidal suspension of rod-shaped viruses. J Am Chem Soc 120: 10571-10572 (Pubitemid 28500376)
-
(1998)
Journal of the American Chemical Society
, vol.120
, Issue.40
, pp. 10571-10572
-
-
Clore, G.M.1
Starich, M.R.2
Gronenborn, A.M.3
-
24
-
-
0037139592
-
Micelle-induced curvature in a water-insoluble HIV-1 Env peptide revealed by NMR dipolar coupling measurement in stretched polyacrylamide gel
-
DOI 10.1021/ja017875d
-
Chou JJ, Kaufman JD et al (2002) Micelle-induced curvature in a water-insoluble HIV-1 Env peptide revealed by NMR dipolar coupling measurement in stretched polyacrylamide gel. J Am Chem Soc 124(11): 2450-2451 (Pubitemid 34251754)
-
(2002)
Journal of the American Chemical Society
, vol.124
, Issue.11
, pp. 2450-2451
-
-
Chou, J.J.1
Kaufman, J.D.2
Stahl, S.J.3
Wingfield, P.T.4
Bax, A.5
-
25
-
-
0034755357
-
Controlling residual dipolar couplings in high-resolution NMR of proteins by strain induced alignment in a gel
-
DOI 10.1023/A:1012417721455
-
Ishii Y, Markus MA et al (2001) Controlling residual dipolar couplings in high-resolution NMR of proteins by strain induced alignment in a gel. J Biomol NMR 21(2): 141-151 (Pubitemid 33040162)
-
(2001)
Journal of Biomolecular NMR
, vol.21
, Issue.2
, pp. 141-151
-
-
Ishii, Y.1
Markus, M.A.2
Tycko, R.3
-
26
-
-
45149147257
-
Liquid crystalline phase of G-tetrad DNA for NMR study of detergent-solubilized proteins
-
DOI 10.1021/ja801729f
-
Lorieau J, Yao L et al (2008) Liquid crystalline phase of G-tetrad DNA for NMR study of detergent-solubilized proteins. J Am Chem Soc 130(24): 7536-7537 (Pubitemid 351842104)
-
(2008)
Journal of the American Chemical Society
, vol.130
, Issue.24
, pp. 7536-7537
-
-
Lorieau, J.1
Yao, L.2
Bax, A.3
-
28
-
-
0033569503
-
Residual dipolar coupling derived orientational constraints on ligand geometry in a 53 kDa protein-ligand complex
-
DOI 10.1006/jmbi.1999.3133
-
Bolon PJ, Al-Hashimi HM et al (1999) Residual dipolar coupling derived orientational constraints on ligand geometry in a 53 kDa protein-ligand complex. J Mol Biol 293(1): 107-115 (Pubitemid 29494873)
-
(1999)
Journal of Molecular Biology
, vol.293
, Issue.1
, pp. 107-115
-
-
Bolon, P.J.1
Al-Hashimi, H.M.2
Prestegard, J.H.3
-
29
-
-
0024853292
-
Spin labeling of proteins
-
DOI 10.1016/0076-6879(89)77007-5
-
Kosen PA (1989) Spin labeling of proteins. Meth Enzymol 177: 86-121 (Pubitemid 20041572)
-
(1989)
Methods in Enzymology
, vol.177
, pp. 86-121
-
-
Kosen, P.A.1
-
30
-
-
24944497258
-
NMR spectroscopy of paramagnetic metalloproteins
-
DOI 10.1002/cbic.200500124
-
Bertini I, Luchinat C et al (2005) NMR spectroscopy of paramagnetic metalloproteins. Chembiochem 6(9): 1536-1549 (Pubitemid 41308942)
-
(2005)
ChemBioChem
, vol.6
, Issue.9
, pp. 1536-1549
-
-
Bertini, I.1
Luchinat, C.2
Parigi, G.3
Pierattelli, R.4
-
31
-
-
48749105838
-
Prospects for lanthanides in structural biology by NMR
-
Otting G (2008) Prospects for lanthanides in structural biology by NMR. J Biomol NMR 42(1): 1-9
-
(2008)
J Biomol NMR
, vol.42
, Issue.1
, pp. 1-9
-
-
Otting, G.1
-
32
-
-
0034674922
-
Binding orientation of proline-rich peptides in solution: Polarity of the profilin-ligand interaction
-
Mahoney NM, Rastogi VK et al. (2000) Binding orientation of proline-rich peptides in solution: polarity of the profilin-ligand interaction. J Am Chem Soc 122: 7851-7852
-
(2000)
J Am Chem Soc
, vol.122
, pp. 7851-7852
-
-
Mahoney, N.M.1
Rastogi, V.K.2
-
33
-
-
0042033050
-
Proton relaxation times in paramagnetic solutions. Effects of electron spin relaxation
-
Bloembergen N, Morgan LO (1961) Proton relaxation times in paramagnetic solutions. Effects of electron spin relaxation. J Chem Phys 34: 842-850
-
(1961)
J Chem Phys
, vol.34
, pp. 842-850
-
-
Bloembergen, N.1
Morgan, L.O.2
-
34
-
-
0034625121
-
Utilization of site-directed spin labeling and high-resolution heteronuclear nuclear magnetic resonance for global fold determination of large proteins with limited nuclear overhauser effect data
-
DOI 10.1021/bi000060h
-
Battiste JL, Wagner G (2000) Utilization of site-directed spin labeling and high-resolution heteronuclear nuclear magnetic resonance for global fold determination of large proteins with limited nuclear Overhauser effect data. Biochemistry 39(18): 5355-5365 (Pubitemid 30257075)
-
(2000)
Biochemistry
, vol.39
, Issue.18
, pp. 5355-5365
-
-
Battiste, J.L.1
Wagner, G.2
-
35
-
-
0037533875
-
EDTA-derivatized deoxythymidine as a tool for rapid determination of protein binding polarity to DNA by intermolecular paramagnetic relaxation enhancement
-
DOI 10.1021/ja034488q
-
Iwahara J, Anderson DE et al (2003) EDTA-derivatized deoxythymidine as a tool for rapid determination of protein binding polarity to DNA by intermolecular paramagnetic relaxation enhancement. J Am Chem Soc 125(22): 6634-6635 (Pubitemid 36667439)
-
(2003)
Journal of the American Chemical Society
, vol.125
, Issue.22
, pp. 6634-6635
-
-
Iwahara, J.1
Anderson, D.E.2
Murphy, E.C.3
Clore, G.M.4
-
36
-
-
33846561471
-
1H transverse paramagnetic relaxation enhancement measurements on macromolecules
-
DOI 10.1016/j.jmr.2006.10.003, PII S109078070600334X
-
Iwahara J, Tang C et al (2007) Practical aspects of (1)H transverse paramagnetic relaxation enhancement measurements on macromolecules. J Magn Reson 184(2): 185-195 (Pubitemid 46177665)
-
(2007)
Journal of Magnetic Resonance
, vol.184
, Issue.2
, pp. 185-195
-
-
Iwahara, J.1
Tang, C.2
Marius Clore, G.3
-
37
-
-
35548943472
-
Elucidating transient macromolecular interactions using paramagnetic relaxation enhancement
-
DOI 10.1016/j.sbi.2007.08.013, PII S0959440X07001200, Carbohydrates and glycoconjugates / Biophysical methods
-
Clore GM, Tang C et al (2007) Elucidating transient macromolecular interactions using paramagnetic relaxation enhancement. Curr Opin Struct Biol 17(5): 603-616 (Pubitemid 350019011)
-
(2007)
Current Opinion in Structural Biology
, vol.17
, Issue.5
, pp. 603-616
-
-
Clore, G.M.1
Tang, C.2
Iwahara, J.3
-
38
-
-
2442433447
-
1H Paramagnetic Relaxation Enhancement Data Arising from a Flexible Paramagnetic Group Attached to a Macromolecule
-
DOI 10.1021/ja031580d
-
Iwahara J, Schwieters CD et al (2004) Ensemble approach for NMR structure refinement against (1)H paramagnetic relaxation enhancement data arising from a flexible paramagnetic group attached to a macromolecule. J Am Chem Soc 126(18): 5879-5896 (Pubitemid 38621427)
-
(2004)
Journal of the American Chemical Society
, vol.126
, Issue.18
, pp. 5879-5896
-
-
Iwahara, J.1
Schwieters, C.D.2
Clore, G.M.3
-
39
-
-
78049389864
-
Integrin beta3 phosphorylation dictates its complex with Shc PTB domain
-
Deshmukh L, Gorbatyuk V et al (2010) Integrin beta3 phosphorylation dictates its complex with Shc PTB domain. J Biol Chem 285: 34875-34884
-
(2010)
J Biol Chem
, vol.285
, pp. 34875-34884
-
-
Deshmukh, L.1
Gorbatyuk, V.2
-
40
-
-
51049098984
-
The structure of alpha-parvin CH2-paxillin LD1 complex reveals a novel modular recognition for focal adhesion assembly
-
Wang X, Fukuda K et al (2008) The structure of alpha-parvin CH2-paxillin LD1 complex reveals a novel modular recognition for focal adhesion assembly. J Biol Chem 283 (30): 21113-21119
-
(2008)
J Biol Chem
, vol.283
, Issue.30
, pp. 21113-21119
-
-
Wang, X.1
Fukuda, K.2
-
41
-
-
33646356250
-
Detecting transient intermediates in macromolecular binding by paramagnetic NMR
-
Iwahara J, Clore GM (2006) Detecting transient intermediates in macromolecular binding by paramagnetic NMR. Nature 440(7088): 1227-1230
-
(2006)
Nature
, vol.440
, Issue.7088
, pp. 1227-1230
-
-
Iwahara, J.1
Clore, G.M.2
-
42
-
-
33751086423
-
Visualization of transient encounter complexes in protein-protein association
-
DOI 10.1038/nature05201, PII NATURE05201
-
Tang C, Iwahara J et al (2006) Visualization of transient encounter complexes in proteinprotein association. Nature 444(7117): 383-386 (Pubitemid 44764115)
-
(2006)
Nature
, vol.444
, Issue.7117
, pp. 383-386
-
-
Tang, C.1
Iwahara, J.2
Clore, G.M.3
-
43
-
-
70349093561
-
Theory, practice, and applications of paramagnetic relaxation enhancement for the characterization of transient low-population states of biological macromolecules and their complexes
-
Clore GM, Iwahara J (2009) Theory, practice, and applications of paramagnetic relaxation enhancement for the characterization of transient low-population states of biological macromolecules and their complexes. Chem Rev 109(9): 4108-4139
-
(2009)
Chem Rev
, vol.109
, Issue.9
, pp. 4108-4139
-
-
Clore, G.M.1
Iwahara, J.2
-
44
-
-
33745634632
-
Efficient χ-tensor determination and NH assignment of paramagnetic proteins
-
DOI 10.1007/s10858-006-9002-4
-
Schmitz C, John M et al (2006) Efficient chi-tensor determination and NH assignment of paramagnetic proteins. J Biomol NMR 35(2): 79-87 (Pubitemid 43986211)
-
(2006)
Journal of Biomolecular NMR
, vol.35
, Issue.2
, pp. 79-87
-
-
Schmitz, C.1
John, M.2
Park, A.Y.3
Dixon, N.E.4
Otting, G.5
Pintacuda, G.6
Huber, T.7
-
45
-
-
33744968001
-
Structure of the θ subunit of Escherichia coli DNA polymerase III in complex with the ε subunit
-
DOI 10.1128/JB.01992-05
-
Keniry MA, Park AY et al (2006) Structure of the theta subunit of Escherichia coli DNA polymerase III in complex with the epsilon subunit. J Bacteriol 188(12): 4464-4473 (Pubitemid 43865766)
-
(2006)
Journal of Bacteriology
, vol.188
, Issue.12
, pp. 4464-4473
-
-
Keniry, M.A.1
Park, A.Y.2
Owen, E.A.3
Hamdan, S.M.4
Pintacuda, G.5
Otting, G.6
Dixon, N.E.7
-
46
-
-
0032520957
-
The structure of the complex of plastocyanin and cytochrome f, determined by paramagnetic NMR and restrained rigid-body molecular dynamics
-
Ubbink M, Ejdeback M et al (1998) The structure of the complex of plastocyanin and cytochrome f, determined by paramagnetic NMR and restrained rigid-body molecular dynamics. Structure 6(3): 323-335 (Pubitemid 28159315)
-
(1998)
Structure
, vol.6
, Issue.3
, pp. 323-335
-
-
Ubbink, M.1
Ejdeback, M.2
Karlsson, B.G.3
Bendall, D.S.4
|