Bicelles at low concentrations

Molecular Pharmaceutics

Volumn 9, Issue 4, 2012, Pages 752-761

  Lu, Zhenwei ^a   Van Horn, Wade D ^a   Chen, Jiang ^a   Mathew, Sijo ^a   Zent, Roy ^a,b   Sanders, Charles R ^a  

^a VANDERBILT UNIVERSITY   (United States)

^b VETERANS AFFAIRS MEDICAL CENTER   (United States)

Author keywords

bicelles; detergents; isotropic; membrane proteins; membranes; micelles; mixed micelles; NMR

Indexed keywords

AMPHOPHILE; DETERGENT; DIMYRISTOYLPHOSPHATIDYLCHOLINE; LIPID; MEMBRANE PROTEIN; WATER;

ARTICLE; BICELLE; BILAYER MEMBRANE; BIOCHEMICAL COMPOSITION; CELL MEMBRANE; CONCENTRATION (PARAMETERS); CONTROLLED STUDY; DIFFUSION COEFFICIENT; DILUTION; PRIORITY JOURNAL; PROTON NUCLEAR MAGNETIC RESONANCE; VISCOSITY;

DETERGENTS; LIPID BILAYERS; MAGNETIC RESONANCE SPECTROSCOPY; MEMBRANE PROTEINS; MICELLES;

EID: 84859362918     PISSN: 15438384     EISSN: 15438392     Source Type: Journal    
DOI: 10.1021/mp2004687     Document Type: Article

References (53)

1. De Angelis, A. A.; Opella, S. J. Bicelle samples for solid-state NMR of membrane proteins Nat. Protoc. 2007, 2, 2332-2338
2. Raschle, T.; Hiller, S.; Etzkorn, M.; Wagner, G. Nonmicellar systems for solution NMR spectroscopy of membrane proteins Curr. Opin. Struct. Biol. 2010, 20, 471-479
3. Sanders, C. R.; Hare, B. J.; Howard, K. P.; Prestegard, J. H. Magnetically-Oriented Phospholipid Micelles as a Tool for the Study of Membrane-Associated Molecules Prog. Nucl. Magn. Reson. Spectrosc. 1994, 26, 421-444 (Pubitemid 124003831)
4. Whiles, J. A.; Deems, R.; Vold, R. R.; Dennis, E. A. Bicelles in structure-function studies of membrane-associated proteins Bioorg. Chem. 2002, 30, 431-442 (Pubitemid 36294219)
5. Sanders, C. R.; Prosser, R. S. Bicelles: a model membrane system for all seasons? Structure 1998, 6, 1227-1234 (Pubitemid 28485955)
6. Prosser, R. S.; Evanics, F.; Kitevski, J. L.; Al-Abdul-Wahid, M. S. Current applications of bicelles in NMR studies of membrane-associated amphiphiles and proteins Biochemistry 2006, 45, 8453-8465 (Pubitemid 44078865)
7. Faham, S.; Bowie, J. U. Bicelle crystallization: a new method for crystallizing membrane proteins yields a monomeric bacteriorhodopsin structure J. Mol. Biol. 2002, 316, 1-6 (Pubitemid 34729261)
8. Vinothkumar, K. R. Structure of rhomboid protease in a lipid environment J. Mol. Biol. 2011, 407, 232-247
9. Barbosa-Barros, L.; Barba, C.; Cocera, M.; Coderch, L.; Lopez-Iglesias, C.; de la Maza, A.; Lopez, O. Effect of bicellar systems on skin properties Int. J. Pharm. 2008, 352, 263-272 (Pubitemid 351273919)
10. Maler, L.; Graslund, A. Artificial membrane models for the study of macromolecular delivery Methods Mol. Biol. 2009, 480, 129-139
11. Rodriguez, G.; Rubio, L.; Cocera, M.; Estelrich, J.; Pons, R.; de la Maza, A.; Lopez, O. Application of bicellar systems on skin: diffusion and molecular organization effects Langmuir 2010, 26, 10578-10584
12. Rubio, L.; Alonso, C.; Rodriguez, G.; Barbosa-Barros, L.; Coderch, L.; De la Maza, A.; Parra, J. L.; Lopez, O. Bicellar systems for in vitro percutaneous absorption of diclofenac Int. J. Pharm. 2010, 386, 108-113
13. Andersson, A.; Maler, L. Size and shape of fast-tumbling bicelles as determined by translational diffusion Langmuir 2006, 22, 2447-2449
14. Chou, J. J.; Baber, J. L.; Bax, A. Characterization of phospholipid mixed micelles by translational diffusion J. Biomol. NMR 2004, 29, 299-308 (Pubitemid 38864828)
15. Glover, K. J.; Whiles, J. A.; Wood, M. J.; Melacini, G.; Komives, E. A.; Vold, R. R. Conformational dimorphism and transmembrane orientation of prion protein residues 110-136 in bicelles Biochemistry 2001, 40, 13137-13142 (Pubitemid 33043527)
16. Lee, D.; Walter, K. F. A.; Bruckner, A. K.; Hilty, C.; Becker, S.; Griesinger, C. Bilayer in small bicelles revealed by lipid-protein interactions using NMR spectroscopy J. Am. Chem. Soc. 2008, 130, 13822-13823
17. Lind, J.; Nordin, J.; Maler, L. Lipid dynamics in fast-tumbling bicelles with varying bilayer thickness: effect of model transmembrane peptides Biochim. Biophys. Acta 2008, 1778, 2526-2534
18. Vold, R. R.; Prosser, R. S.; Deese, A. J. Isotropic solutions of phospholipid bicelles: A new membrane mimetic for high-resolution NMR studies of polypeptides J. Biomol. NMR 1997, 9, 329-335 (Pubitemid 127505395)
19. Wu, H.; Su, K.; Guan, X.; Sublette, M. E.; Stark, R. E. Assessing the size, stability, and utility of isotropically tumbling bicelle systems for structural biology Biochim. Biophys. Acta 2010, 1798, 482-488
20. Katsaras, J.; Harroun, T. A.; Pencer, J.; Nieh, M. P. "Bicellar" lipid mixtures as used in biochemical and biophysical studies Naturwissenschaften 2005, 92, 355-366 (Pubitemid 41561579)
21. Nieh, M. P.; Raghunathan, V. A.; Kline, S. R.; Harroun, T. A.; Huang, C. Y.; Pencer, J.; Katsaras, J. Spontaneously formed unilamellar vesicles with path-dependent size distribution Langmuir 2005, 21, 6656-6661 (Pubitemid 41084450)
22. Pabst, G.; Kucerka, N.; Nieh, M. P.; Rheinstadter, M. C.; Katsaras, J. Applications of neutron and X-ray scattering to the study of biologically relevant model membranes Chem. Phys. Lipids 2010, 163, 460-479
23. Van Dam, L.; Karlsson, G.; Edwards, K. Direct observation and characterization of DMPC/DHPC aggregates under conditions relevant for biological solution NMR Biochim. Biophys. Acta, Biomembr. 2004, 1664, 241-256 (Pubitemid 39140998)
24. Van Dam, L.; Karlsson, G.; Edwards, K. Morphology of magnetically aligning DMPC/DHPC aggregates-perforated sheets, not disks Langmuir 2006, 22, 3280-3285
25. Soong, R.; Macdonald, P. M. Water diffusion in bicelles and the mixed bicelle model Langmuir 2009, 25, 380-390
26. Soong, R.; Majonis, D.; Macdonald, P. M. Size of bicelle defects probed via diffusion nuclear magnetic resonance of PEG Biophys. J. 2009, 97, 796-805
27. De Angelis, A. A.; Jones, D. H.; Grant, C. V.; Park, S. H.; Mesleh, M. F.; Opella, S. J. NMR experiments on aligned samples of membrane proteins Methods Enzymol. 2005, 394, 350-382 (Pubitemid 40460923)
28. Sanders, C. R.; Landis, G. C. Reconstitution of Membrane-Proteins into Lipid-Rich Bilayered Mixed Micelles for Nmr-Studies Biochemistry 1995, 34, 4030-4040
29. Bayburt, T. H.; Sligar, S. G. Membrane protein assembly into Nanodiscs FEBS Lett. 2010, 584, 1721-1727
30. Lin, T. L.; Chen, S. H.; Gabriel, N. E.; Roberts, M. F. Use of Small-Angle Neutron-Scattering to Determine the Structure and Interaction of Dihexanoylphosphatidylcholine Micelles J. Am. Chem. Soc. 1986, 108, 3499-3507
31. Sanders, C. R.; Schwonek, J. P. Characterization of Magnetically Orientable Bilayers in Mixtures of Dihexanoylphosphatidylcholine and Dimyristoylphosphatidylcholine by Solid-State NMR Biochemistry 1992, 31, 8898-8905
32. Bocharov, E. V.; Mayzel, M. L.; Volynsky, P. E.; Goncharuk, M. V.; Ermolyuk, Y. S.; Schulga, A. A.; Artemenko, E. O.; Efremov, R. G.; Arseniev, A. S. Spatial Structure and pH-dependent Conformational Diversity of Dimeric Transmembrane Domain of the Receptor Tyrosine Kinase EphA1 J. Biol. Chem. 2008, 283, 29385-29395
33. Bocharov, E. V.; Mayzel, M. L.; Volynsky, P. E.; Mineev, K. S.; Tkach, E. N.; Ermolyuk, Y. S.; Schulga, A. A.; Efremov, R. G.; Arseniev, A. S. Left-Handed Dimer of EphA2 Transmembrane Domain: Helix Packing Diversity among Receptor Tyrosine Kinases Biophys. J. 2010, 98, 881-889
34. Lau, T. L.; Partridge, A. W.; Ginsberg, M. H.; Ulmer, T. S. Structure of the integrin beta3 transmembrane segment in phospholipid bicelles and detergent micelles Biochemistry 2008, 47, 4008-4016 (Pubitemid 351458115)
35. Lau, T. L.; Kim, C.; Ginsberg, M. H.; Ulmer, T. S. The structure of the integrin alphaIIbbeta3 transmembrane complex explains integrin transmembrane signalling EMBO J. 2009, 28, 1351-1361
36. Mineev, K. S.; Bocharov, E. V.; Pustovalova, Y. E.; Bocharova, O. V.; Chupin, V. V.; Arseniev, A. S. Spatial structure of the transmembrane domain heterodimer of ErbB1 and ErbB2 receptor tyrosine kinases J. Mol. Biol. 2010, 400, 231-243
37. Poget, S. F.; Cahill, S. M.; Girvin, M. E. Isotropic bicelles stabilize the functional form of a small multidrug-resistance pump for NMR structural studies J. Am. Chem. Soc. 2007, 129, 2432-2433 (Pubitemid 46364038)
38. Wu, D. H.; Chen, A. D.; Johnson, C. S. An Improved Diffusion-Ordered Spectroscopy Experiment Incorporating Bipolar-Gradient Pulses J. Magn. Reson., Ser. A 1995, 115, 260-264
39. Stejskal, E. O.; Tanner, J. E. Spin Diffusion Measurements: Spin Echoes in the Presence of a Time-Dependent Field Gradient J. Chem. Phys. 1965, 42, 288-292
40. Findeisen, M.; Brand, T.; Berger, S. A 1H-NMR thermometer suitable for cryoprobes Magn. Reson. Chem. 2007, 45, 175-178
41. Cantor, C. R.; Schimmel, P. R. Techniques for the study of biological structure and function; W. H. Freeman: San Francisco, 1980.
42. Weigelt, J. Single scan, sensitivity- and gradient-enhanced TROSY for multidimensional NMR experiments J. Am. Chem. Soc. 1998, 120, 10778-10779 (Pubitemid 28498833)
43. Triba, M. N.; Warschawski, D. E.; Devaux, P. F. Reinvestigation by phosphorus NMR of lipid distribution in bicelles Biophys. J. 2005, 88, 1887-1901 (Pubitemid 40976201)
44. Triba, M. N.; Devaux, P. F.; Warschawski, D. E. Effects of lipid chain length and unsaturation on bicelles stability. A phosphorus NMR study Biophys. J. 2006, 91, 1357-1367 (Pubitemid 44174252)
45. Yao, S.; Babon, J. J.; Norton, R. S. Protein effective rotational correlation times from translational self-diffusion coefficients measured by PFG-NMR Biophys. Chem. 2008, 136, 145-151
46. Sanders, C. R., 2nd; Prestegard, J. H. Magnetically orientable phospholipid bilayers containing small amounts of a bile salt analogue, CHAPSO Biophys. J. 1990, 58, 447-460 (Pubitemid 20249672)
47. Barczyk, M.; Carracedo, S.; Gullberg, D. Integrins Cell Tissue Res. 2010, 339, 269-280
48. Hynes, R. O. Integrins: bidirectional, allosteric signaling machines Cell 2002, 110, 673-687 (Pubitemid 35283958)
49. Hwang, P. M.; Bishop, R. E.; Kay, L. E. The integral membrane enzyme PagP alternates between two dynamically distinct states Proc. Natl. Acad. Sci. U.S.A. 2004, 101, 9618-9623 (Pubitemid 38869285)
50. Burns, R. A.; Roberts, M. F.; Dluhy, R.; Mendelsohn, R. Monomer-to-Micelle Transition of Dihexanoylphosphatidylcholine-C-13 NMR and Raman Studies J. Am. Chem. Soc. 1982, 104, 430-438
51. Hauser, H. Short-chain phospholipids as detergents Biochim. Biophys. Acta, Biomembr. 2000, 1508, 164-181
52. Tausk, R. J.; Karmiggelt, J.; Oudshoorn, C.; Overbeek, J. T. Physical chemical studies of short-chain lecithin homologues. I. Influence of the chain length of the fatty acid ester and of electrolytes on the critical micelle concentration Biophys. Chem. 1974, 1, 175-183
53. Tausk, R. J.; van Esch, J.; Karmiggelt, J.; Voordouw, G.; Overbeek, J. T. Physical chemical studies of short-chain lecithin homologues. II. Micellar weights of dihexanoyl- and diheptanoyllecithin Biophys. Chem. 1974, 1, 184-203