Polymorphisms in genes encoding mt-tRNA in female breast cancer in Poland

Mitochondrial DNA

Volumn 23, Issue 2, 2012, Pages 106-111

  Grzybowska Szatkowska, Ludmila ^a   Slaska, Brygida ^b  

^a MEDICAL UNIVERSITY OF LUBLIN   (Poland)

^b UNIVERSITY OF LIFE SCIENCES IN LUBLIN   (Poland)

Author keywords

Carcinogenesis; Mitochondrial DNA; Mitochondrial haplogroups

Indexed keywords

MITOCHONDRIAL RNA;

ARTICLE; BLOOD EXAMINATION; BREAST CANCER; CLINICAL ARTICLE; DISORDERS OF MITOCHONDRIAL FUNCTIONS; FEMALE; GENETIC POLYMORPHISM; HUMAN; HUMAN TISSUE; POLAND; PRIORITY JOURNAL; RNA STRUCTURE; TISSUE SECTION;

BASE SEQUENCE; BREAST NEOPLASMS; CARCINOMA, DUCTAL, BREAST; DNA, MITOCHONDRIAL; FEMALE; HAPLOTYPES; HUMANS; MIDDLE AGED; MITOCHONDRIA; MITOCHONDRIAL DISEASES; MOLECULAR SEQUENCE DATA; MUTATION; POLAND; POLYMORPHISM, GENETIC; RNA, TRANSFER; SEQUENCE ANALYSIS, DNA;

EID: 84859342608     PISSN: 19401736     EISSN: 19401744     Source Type: Journal    
DOI: 10.3109/19401736.2012.660925     Document Type: Article

References (28)

1. Achilli A, Rengo C, Battaglia V, Pala M, Olivieri A, Fornarino S, Magri C, Scozzari R, Babudri N, Santachiara-Benerecetti AS, Bandelt HJ, Semino O, Torroni A. 2005. Saami and Berbers-an unexpected mitochondrial DNA link. Am J Hum Genet 76: 883-886. (Pubitemid 40563109)
2. Bai RK, Leal SM, Covarrubias D, Liu A, Wong LJ. 2007. Mitochondrial genetic background modifies breast cancer risk. Cancer Res 67:4687-4694. (Pubitemid 46910174)
3. Booker LM, Habermacher GM, Jessie BC, Sun QC, Baumann AK, Amin M, Lim SD, Fernandez-Golarz C, Lyles RH, Brown MD, Marshall FF, Petros JA. 2006. North American white mitochondrial haplogroups in prostate and renal cancer. J Urol 175:468-472. (Pubitemid 43067327)
4. Canter JA, Kallianpur AR, Parl FF, Millikan RC. 2005. Mitochondrial DNA G10398A polymorphism and invasive breast cancer in African-American women. Cancer Res 65: 8028-8033. (Pubitemid 41297284)
5. Covarrubias D, Bai RK, Wong LJ, Leal SM. 2008. Mitochondrial DNA variant interactions modify breast cancer risk. J Hum Genet 53:924-928.
6. Crimi M, Del Bo R, Galbiati S, Sciacco M, Bordoni A, Bresolin N, Comi PG. 2003. Mitochondrial A12308G polymorphism affects clinical features in patients with single mtDNA macrodeletion. Eur J Hum Genet 11:896-898. (Pubitemid 37406996)
7. Czarnecka AM, Krawczyk T, Zdrozny M, Lubiń ski J, Arnold RS, Kukwa W, Scińska A, Golik P, Bartnik E, Petros JA. 2010. Mitochondrial NADH-dehydrogenase subunit 3 (ND3) polymorphism (A10398G) and sporadic breast cancer in Poland. Breast Cancer Res Treat 121:511-518.
8. Darvishi K, Sharma S, Bhat AK, Rai E, Bamezai RN. 2007. Mitochondrial DNA G10398A polymorphism imparts maternal haplogroup N a risk for breast and esophageal cancer. Cancer Lett 8:249-255. (Pubitemid 46452933)
9. Gal A, Pentelenyi K, Remenyi V, Pal Z, Csanyi B, Tomory G, Rasko I, Molnar MJ. 2010. Novel heteroplasmic mutation in the anticodon stem of mitochondrial tRNALys associated with dystonia and stroke-like episodes. Acta Neurol Scand 122: 252-256.
10. Ghelli A, Porcelli AM, Zanna C, Vidoni S, Mattioli S, Barbieri A, Iommarini L, Pala M, Achilli A, Torroni A, Rugolo M, Carelli V. 2009. The background of mitochondrial DNA haplogroup J increases the sensitivity of Leber's hereditary optic neuropathy cells to 2, 5-hexanedione toxicity. PLoS One 19:e7922.
11. Grasso M, Diegoli M, Brega A, Campana C, Tavazzi L, Arbustini E. 2001. The mitochondrial DNA mutation T12297C affects a highly conserved nucleotide of tRNA(Leu(CUN)) and is associated with dilated cardiomyopathy. Eur J Hum Genet 9: 311-315. (Pubitemid 32366701)
12. Hall TA. 1999. BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41:95-98.
13. Helm M, Brulé H, Friede D, Giegé R, Pütz D, Florentz C. 2000. Search for characteristic structural features of mammalian mitochondrial tRNAs. RNA 6:1356-1379.
14. Herrnstadt C, Elson JL, Fahy E, Preston G, Turnbull DM, Anderson C, Ghosh SS, Olefsky JM, BealMF, Davis RE, Howell N. 2002. Reduced-median-network analysis of complete mitochondrial DNA coding-region sequences from the major African, Asian, and European haplogroups. Am J Hum Genet 70:1152-1171. (Pubitemid 34450567)
15. Hosgood HD, Liu CS, Rothman N, Weinstein SJ, Bonner MR, Shen M, Lim U, Virtamo J, Cheng WL, Albanes D, Lan Q. 2010. Mitochondrial DNA copy number and lung cancer risk in a prospective cohort study. Carcinogenesis 31:847-849.
16. Huang X, Madan A. 1999. CAP3: A DNA sequence assembly program. Genome Res 9:868-877. (Pubitemid 29488446)
17. Kivisild T, Shen P, Hall DP, Do B, Sung R, Davis K, Passarino G, Underhill PA, Scharfe C, Torroni A, Scozzari R, Modiano D, Coppa A, de Knijff P, Feldman M, Cavalli-Sforza LL, Oefner PJ. 2006. The role of selection in the evolution of human mitochondrial genomes. Genetics 172:373-387. (Pubitemid 43345499)
18. Koilkonda RD, Guy J. 2011. Leber's hereditary optic neuropathygene therapy: From benchtop to bedside. J Ophthalmol 2011: 179412.
19. Lehtonen MS, Moilanen JS, Majamaa K. 2003. Increased variation in mtDNA in patients with familial sensorineural hearing impairment. Hum Genet 113:220-227. (Pubitemid 36992280)
20. Maniura-Weber K, Helm M, Engemann K, Eckertz S, Mollers M, Schauen M, Hayrapetyan A, von Kleist-Retzow JC, Lightowlers RN, Bindoff LA, Wiesner RJ. 2006. Molecular dysfunction associated with the human mitochondrial 3302A. G mutation in the MTTL1 (mt-tRNALeu(UUR)) gene. Nucleic Acids Res 34: 6404-6415. (Pubitemid 46017940)
21. McFarland R, Elson JL, Taylor RW, Howell N, Turnbull DM. 2004. Assigning pathogenicity to mitochondrial tRNA mutations: When 'definitely maybe' is not good enough. Trends Genet 20: 591-596. (Pubitemid 39441275)
22. Mishmar D, Ruiz-Pesini E, Golik P, Macaulay V, Clark AG, Hosseini S, Brandon M, Easley K, Chen E, Brown MD, Sukernik RI, Olckers A, Wallace DC. 2003. Natural selection shaped regional mtDNA variation in humans. Proc Natl Acad Sci USA 100:171-176. (Pubitemid 36078047)
23. Petros JA, Baumann AK, Ruiz-Pesini E, Amin MB, Sun CQ, Hall J, Lim S, Issa MM, Flanders WD, Hosseini SH, Marshall FF, Wallacem DC. 2005. mtDNA mutations increase tumorigenicity in prostate cancer. Proc Natl Acad Sci USA 102:719-724. (Pubitemid 40282732)
24. Qu F, Liu X, Zhou F, Yang H, Bao G, He X, Xing J. 2011. Association between mitochondrial DNA content in leukocytes and colorectal cancer risk. Cancer 117:3148-3155.
25. Ruiz-Pesini E, Mishmar D, Brandon M, Procaccio V, Wallace DC. 2004. Effects of purifying and adaptive selection on regional variation in human mtDNA. Science 303:223-226. (Pubitemid 38057570)
26. Ruppert V, Nolte D, Aschenbrenner T, Pankuweit S, Funck R, Maisch B. 2004. Novel point mutations in the mitochondrial DNA detected in patients with dilated cardiomyopathy by screening the whole mitochondrial genome. Biochem Biophys Res Commun 318:535-543. (Pubitemid 38553813)
27. Sakr WA. 2004. Epidemiology of prostate cancer and its precursors. Modern Pathol 10(317):1-10.
28. Tan DJ, Bai RK, Wong LJC. 2002. Comprehensive scanning of somatic mitochondrial DNA mutations in breast cancer. Cancer Res 62:972-976.