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Volumn 136, Issue 11, 2012, Pages

Explicit all-atom modeling of realistically sized ligand-capped nanocrystals

Author keywords

[No Author keywords available]

Indexed keywords

ALKYL CHAIN; ALL-ATOM MODEL; CAPPING LIGANDS; COARSE GRAINED MODELS; COARSE GRAINING; FUTURE MODELS; IN-VACUUM; INTERMOLECULAR POTENTIAL MODELS; MOLECULAR DYNAMICS SIMULATIONS; REFERENCE STANDARD; SELF ASSEMBLY PROCESS; SINGLE NANOCRYSTALS; SYSTEM SIZE; UNIFORM DISTRIBUTION; UNIT CELLS; UNITED ATOMS;

EID: 84859245867     PISSN: 00219606     EISSN: None     Source Type: Journal    
DOI: 10.1063/1.3689973     Document Type: Article
Times cited : (43)

References (59)
  • 1
    • 30144432584 scopus 로고    scopus 로고
    • Structural diversity in binary nanoparticle superlattices
    • DOI 10.1038/nature04414
    • E. V. Shevchenko, D. V. Talapin, N. A. Kotov, S. O'Brien, and C. B. Murray, Nature (London) 439, 55 (2006). 10.1038/nature04414 (Pubitemid 43053626)
    • (2006) Nature , vol.439 , Issue.7072 , pp. 55-59
    • Shevchenko, E.V.1    Talapin, D.V.2    Kotov, N.A.3    O'Brien, S.4    Murray, C.B.5
  • 2
    • 13444252377 scopus 로고    scopus 로고
    • Observation of an AB phase in bidisperse nanocrystal superlattices
    • DOI 10.1002/cphc.200400382
    • A. E. Saunders and B. A. Korgel, Chem. Phys. Chem. 6, 61 (2005). 10.1002/cphc.200400382 (Pubitemid 40203537)
    • (2005) ChemPhysChem , vol.6 , Issue.1 , pp. 61-65
    • Saunders, A.E.1    Korgel, B.A.2
  • 9
    • 67651214111 scopus 로고    scopus 로고
    • 10.1021/nn900324q
    • J. H. Bang and P. V. Kamat, ACS Nano 3, 1467 (2009). 10.1021/nn900324q
    • (2009) ACS Nano , vol.3 , pp. 1467
    • Bang, J.H.1    Kamat, P.V.2
  • 15
    • 0030888674 scopus 로고    scopus 로고
    • Structure and dynamics in alkanethiolate monolayers self-assembled on gold nanoparticles: A DSC, FT-IR, and deuterium NMR study
    • DOI 10.1021/ja963571t, PII S0002786396035718
    • A. Badia, L. Cuccia, L. Demers, F. Morin, and R. B. Lennox, J. Am. Chem. Soc. 119, 2682 (1997). 10.1021/ja963571t (Pubitemid 27189562)
    • (1997) Journal of the American Chemical Society , vol.119 , Issue.11 , pp. 2682-2692
    • Badia, A.1    Cuccia, L.2    Demers, L.3    Morin, F.4    Lennox, R.B.5
  • 16
    • 77953511316 scopus 로고    scopus 로고
    • 10.1103/PhysRevLett.104.235501
    • J. M. D. Lane and G. S. Grest, Phys. Rev. Lett. 104, 235501 (2010). 10.1103/PhysRevLett.104.235501
    • (2010) Phys. Rev. Lett. , vol.104 , pp. 235501
    • Lane, J.M.D.1    Grest, G.S.2
  • 17
    • 78649804310 scopus 로고    scopus 로고
    • 10.1021/jp910101t
    • A. Yang and C. Weng, J. Phys. Chem. C 114, 8697 (2010). 10.1021/jp910101t
    • (2010) J. Phys. Chem. C , vol.114 , pp. 8697
    • Yang, A.1    Weng, C.2
  • 20
    • 36549097979 scopus 로고
    • 10.1063/1.458709
    • S. Toxvaerd, J. Chem. Phys. 93, 4290 (1990). 10.1063/1.458709
    • (1990) J. Chem. Phys. , vol.93 , pp. 4290
    • Toxvaerd, S.1
  • 25
    • 77954816002 scopus 로고    scopus 로고
    • 10.1016/j.polymer.2010.04.049
    • C. Li, P. Choi, and P. R. Sundararajan, Polymer 51, 2803 (2010). 10.1016/j.polymer.2010.04.049
    • (2010) Polymer , vol.51 , pp. 2803
    • Li, C.1    Choi, P.2    Sundararajan, P.R.3
  • 27
    • 0036667740 scopus 로고    scopus 로고
    • 10.1016/S0959-440X(02)00353-6
    • H. L. Scott, Curr. Opin. Struct. Biol. 12, 495 (2002). 10.1016/S0959-440X(02)00353-6
    • (2002) Curr. Opin. Struct. Biol. , vol.12 , pp. 495
    • Scott, H.L.1
  • 29
    • 0029912748 scopus 로고    scopus 로고
    • Development and testing of the OPLS all-atom force field on conformational energetics and properties of organic liquids
    • DOI 10.1021/ja9621760, PII S0002786396021762
    • W. L. Jorgensen, D. S. Maxwell, and J. Tirado-Rives, J. Am. Chem. Soc. 118 (45), 11225 (1996). 10.1021/ja9621760 (Pubitemid 26399746)
    • (1996) Journal of the American Chemical Society , vol.118 , Issue.45 , pp. 11225-11236
    • Jorgensen, W.L.1    Maxwell, D.S.2    Tirado-Rives, J.3
  • 34
  • 35
    • 84859232011 scopus 로고    scopus 로고
    • J. W. Ponder, tinker - software tools for molecular design, (2010); see http://dasher.wustl.edu/tinker/.
    • (2010)
    • Ponder, J.W.1
  • 40
    • 36048983436 scopus 로고    scopus 로고
    • Exploring the energetic deposition of pentacene on pentacene through molecular dynamics simulations
    • DOI 10.1021/jp074124a
    • J. E. Goose and P. Clancy, J. Phys. Chem. C 111, 43 (2007). 10.1021/jp074124a (Pubitemid 350097630)
    • (2007) Journal of Physical Chemistry C , vol.111 , Issue.43 , pp. 15653-15659
    • Goose, J.E.1    Clancy, P.2
  • 42
    • 55049139526 scopus 로고    scopus 로고
    • 10.1016/j.susc.2008.09.027
    • R. Cantrell and P. Clancy, Surf. Sci. 602 (22), 3499 (2008). 10.1016/j.susc.2008.09.027
    • (2008) Surf. Sci. , vol.602 , Issue.22 , pp. 3499
    • Cantrell, R.1    Clancy, P.2
  • 43
    • 79957876574 scopus 로고    scopus 로고
    • 10.1016/j.susc.2011.03.023
    • A. P. Kaushik and P. Clancy, Surf. Sci. 605 (13-14), 1185 (2011). 10.1016/j.susc.2011.03.023
    • (2011) Surf. Sci. , vol.605 , Issue.1314 , pp. 1185
    • Kaushik, A.P.1    Clancy, P.2
  • 44
    • 84966262179 scopus 로고
    • 10.1090/S0025-5718-1980-0572855-7
    • J. Nocedal, Math. Comput. 35, 773 (1980). 10.1090/S0025-5718-1980- 0572855-7
    • (1980) Math. Comput. , vol.35 , pp. 773
    • Nocedal, J.1
  • 47
    • 0019707626 scopus 로고
    • Polymorphic transitions in single crystals: A new molecular dynamics method
    • DOI 10.1063/1.328693
    • M. Parrinello and A. Rahman, J. Appl. Phys. 52, 7182 (1981). 10.1063/1.328693 (Pubitemid 12456820)
    • (1981) Journal of Applied Physics , vol.52 , Issue.12 , pp. 7182-7190
    • Parrinello, M.1    Rahman, A.2
  • 51
    • 26644438864 scopus 로고
    • 10.1016/0301-0104(91)87019-R
    • E. Guardia, R. Rey, and J. A. Padro, Chem. Phys. 155, 187 (1991). 10.1016/0301-0104(91)87019-R
    • (1991) Chem. Phys. , vol.155 , pp. 187
    • Guardia, E.1    Rey, R.2    Padro, J.A.3
  • 52
    • 4243754128 scopus 로고    scopus 로고
    • 10.1103/PhysRevLett.78.2690
    • C. Jarzynski, Phys. Rev. Lett. 78, 2690 (1997). 10.1103/PhysRevLett.78. 2690
    • (1997) Phys. Rev. Lett. , vol.78 , pp. 2690
    • Jarzynski, C.1
  • 53
    • 4244116139 scopus 로고    scopus 로고
    • 10.1103/PhysRevE.56.5018
    • C. Jarzynski, Phys. Rev. E 56, 5018 (1997). 10.1103/PhysRevE.56.5018
    • (1997) Phys. Rev. e , vol.56 , pp. 5018
    • Jarzynski, C.1
  • 54
    • 0002467378 scopus 로고
    • see. 10.1006/jcph.1995.1039
    • S. J. Plimpton, J. Comput. Phys. 117, 1 (1995), see http://lammps.sandia. gov. 10.1006/jcph.1995.1039
    • (1995) J. Comput. Phys. , vol.117 , pp. 1
    • Plimpton, S.J.1
  • 56
    • 36049001806 scopus 로고    scopus 로고
    • Molecular dynamics simulation study of self-assembled monolayers of alkanethiol surfactants on spherical gold nanoparticles
    • DOI 10.1021/jp0746289
    • P. Kr. Ghorai and S. C. Glotzer, J. Phys. Chem. C 111, 15857 (2007). 10.1021/jp0746289 (Pubitemid 350097651)
    • (2007) Journal of Physical Chemistry C , vol.111 , Issue.43 , pp. 15857-15862
    • Ghorai, P.Kr.1    Glotzer, S.C.2
  • 57
    • 84859259437 scopus 로고    scopus 로고
    • private communication ; see details in the supplementary material (Ref.)
    • T. Hanrath, private communication (2011); see details in the supplementary material (Ref.).
    • (2011)
    • Hanrath, T.1
  • 59
    • 84859259440 scopus 로고    scopus 로고
    • See supplementary material at http://dx.doi.org/10.1063/1.3689973 E-JCPSA6-136-045209 for some figures of isolated nanocrystals with ligands grafted on at different grafting densities as well as some plots of the variation of interaction energy between two nanocrystals as a function of ligand grafting density and ligand length. The supplemenary material provides some experimental data from differential scanning calorimetry to investigate ligand bundling. The tables containing the force field parameters for the OPLS UA model (Ref.) as well as the Paul et al. UA model (Ref.) are also provided.


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