Multimodal 3D imaging of cells and tissue, bridging the gap between clinical and research microscopy

Annals of Biomedical Engineering

Volumn 40, Issue 2, 2012, Pages 263-276

  Miao, Qin ^a   Reeves, Anthony P ^b   Patten, Florence W ^c,d   Seibel, Eric J ^d  

^a University of Washington   (United States)

^b School of Operations Research and Industrial Engineering   (United States)

^c VisionGate Inc   (United States)

^d University of Washington   (United States)

Author keywords

3D visualization; Absorption stain; Cancer diagnosis; Fluorescence; Image segmentation; Multimodal imaging; Nanoparticles; Nuclear to cytoplasmic ratio

Indexed keywords

3-D IMAGE; 3D IMAGING; 3D STRUCTURE; 3D VISUALIZATION; ABSORPTION DYE; BIOSIGNATURES; CANCER DIAGNOSIS; CLINICAL PRACTICES; COMPUTED TOMOGRAPHY; COREGISTRATION; DEPTH OF FIELD; FOCAL PLANE; HIGH NUMERICAL APERTURE OBJECTIVE; MICROCAPILLARY TUBES; MOLECULAR INFORMATION; MULTI-MODAL; MULTIMODAL IMAGING; MULTIPLE MODES; NUCLEAR-TO-CYTOPLASMIC RATIO; OPTICAL PROJECTIONS; PLATFORM TECHNOLOGY; TOMOGRAPHIC;

COMPUTERIZED TOMOGRAPHY; CYTOLOGY; DISEASES; FLUORESCENCE; FLUOROPHORES; IMAGE MATCHING; IMAGE SEGMENTATION; INSTRUMENTS; NANOPARTICLES; OPTICAL PROJECTORS; PHOTONICS; THREE DIMENSIONAL COMPUTER GRAPHICS; TISSUE; TUBES (COMPONENTS); VISUALIZATION;

THREE DIMENSIONAL;

ANIMAL; ARTICLE; CYTOLOGY; FIBROBLAST; HUMAN; METHODOLOGY; MICROSCOPY; MUNTJAC; OPTICAL TOMOGRAPHY; THREE DIMENSIONAL IMAGING; TUMOR CELL LINE;

ANIMALS; CELL LINE, TUMOR; FIBROBLASTS; HUMANS; IMAGING, THREE-DIMENSIONAL; MICROSCOPY; MUNTJACS; TOMOGRAPHY, OPTICAL;

EID: 84858799908     PISSN: 00906964     EISSN: 15739686     Source Type: Journal    
DOI: 10.1007/s10439-011-0411-5     Document Type: Article

References (47)

1. J Aaron E Rosa K Travis N Harrison J Burt MJ Yacaman K Sokolov 2008 Polarization microscopy with stellated gold nanoparticles for robust, in situ monitoring of biomolecules Opt. Express 16 2153 18542296 10.1364/OE.16.002153 1:CAS:528:DC%2BD1cXhvFansbk%3D (Pubitemid 351240058)
2. T Alanentalo A Asayesh H Morrison CE Loren D Holmberg J Sharpe U Ahlgren 2007 Tomographic molecular imaging and 3D quantification within adult mouse organs Nat. Methods 4 31 33 17143281 10.1038/nmeth985 1:CAS:528: DC%2BD28XhtlGktbzJ (Pubitemid 46029471)
3. E Boisselier D Astruc 2009 Gold nanoparticles in nanomedicine: preparations, imaging, diagnostics, therapies and toxicity Chem. Soc. Rev. 38 1759 19587967 10.1039/b806051g 1:CAS:528:DC%2BD1MXmsVSms7k%3D
4. B Bonnemain 1998 Superparamagnetic agents in magnetic resonance imaging: physicochemical characteristics and clinical applications-A review J. Drug Target 6 167 174 9888302 10.3109/10611869808997890 1:CAS:528: DyaK1MXkvFKguw%3D%3D (Pubitemid 29034284)
5. EJ Botcherby MJ Booth R Juskaitis T Wilson 2008 Real-time extended depth of field microscopy Opt. Express 16 21843 21848 19104617 10.1364/OE.16.021843
6. B Carpenter C MacKay A Alnabulsi M KacKay C Telfer WT Melvin GI Murray 2005 The roles of heterogeneous nuclear ribonucleoproteins in tumor development and progression Biochim. Biophys. Acta 1765 85 100 16378690
7. O Clement N Siauve M Lewin E de Keviler C-A Cuenod G Frija 1998 Contrast agents in magnetic resonance imaging of the liver: present and future Biomed. Pharmacother. 52 51 58 9755795 10.1016/S0753-3322(98)80003-6 1:STN:280:DyaK1cvivVGntg%3D%3D (Pubitemid 28172689)
8. EE Connor J Mwamuka A Gole CJ Murphy MD Wyatt 2005 Gold nanoparticles are taken up by human cells but do not cause acute cytotoxicity Small 1 325 327 17193451 10.1002/smll.200400093 1:CAS:528:DC%2BD2MXhsVaiu74%3D (Pubitemid 43951781)
9. MJ Crow G Grant JM Provenzale A Wax 2009 Molecular imaging and quantitative measurement of epidermal growth factor receptor expression in live cancer cells using immunolabeled gold nanoparticles Am. J. Roentgenol. 192 1021 10.2214/AJR.07.3535
10. W Denk JH Strickler WW Webb 1990 Two-photon laser scanning fluorescence microscopy Science 248 73 76 2321027 10.1126/science.2321027 1:CAS:528:DyaK3cXktVaktb8%3D
11. DL Farkas G Baxter RL DeBiasio A Gough MA Nederlof D Pane J Pane DR Patek KW Ryan DL Taylor 1993 Multimode light microscopy and the dynamics of molecules, cells and tissues Annu. Rev. Physiol. 55 785 817 8466193 10.1146/annurev.ph.55.030193.004033 1:CAS:528:DyaK3sXkvFSgs7w%3D (Pubitemid 23102156)
12. M Fauver EJ Seibel JR Rahn MG Meyer FW Patten T Neumann AC Nelson 2005 Three-dimensional imaging of single isolated cell nuclei using optical projection tomography Opt. Express 13 4210 19495335 10.1364/OPEX.13.004210 (Pubitemid 40899320)
13. CA Glasbey NJ Martin 1996 Multimodal microscopy by digital image processing J. Microsc. 181 225 237 10.1046/j.1365-2818.1996.91372.x (Pubitemid 26124655)
14. B Huang SA Jones B Brandenburg X Zhuang 2008 Whole-cell 3D STORM reveals interactions between cellular structures with nanometer-scale resolution Nat. Methods 5 1047 1052 19029906 10.1038/nmeth.1274 1:CAS:528:DC%2BD1cXhsVWhurjN
15. J Huisken J Swoger FD Bene J Wittbrodt EHK Stelzer 2004 Optical sectioning deep inside live embryos by selective plane illumination microscopy Science 305 1007 1009 15310904 10.1126/science.1100035 1:CAS:528: DC%2BD2cXmsVGmsbY%3D (Pubitemid 39071776)
16. Kak, A. C., and M. Slaney. Principles of Computerized Tomographic Imaging. New York: IEEE Press, 1988.
17. SA Kalele NR Tiwari SW Gosavi SK Kulkarni 2007 Plasmon-assisted photonics at the nanoscale J. Nanophoton. 1 012501 10.1117/1.2748429
18. BN Khlebtsov VA Khanadeev NG Khlebtsov 2008 Observation of extra-high depolarized light scattering spectra from gold nanorods J. Phys. Chem. C 112 12760 10.1021/jp802874x 1:CAS:528:DC%2BD1cXpt1Snsr8%3D
19. TA Klar S Jakobs M Dybra A Eegner SW Hell 2000 Fluorescence microscopy with diffraction barrier broken by stimulated emission PNAS 97 8206 8210 10899992 10.1073/pnas.97.15.8206 1:CAS:528:DC%2BD3cXlt1Ggtro%3D (Pubitemid 30639649)
20. Koss, L. G., and M. R. Melamed. Koss' Diagnostic Cytology and Its Histopathologic Bases. Philadelphia: Lippincott Williams & Wilkins, 2006.
21. A Lemelle B Veksler IS Kozhevnikov GG Akchurin SA Piletsky I Meglinski 2009 Application of gold nanoparticles as contrast agents in confocal laser scanning microscopy Laser Phys. Lett. 6 71 10.1002/lapl.200810091 1:CAS:528:DC%2BD1MXisVKgsr4%3D
22. JG McNally T Karpova J Cooper JA Conchello 1999 Three-dimensional imaging by deconvolution microscopy Methods 19 373 385 10579932 10.1006/meth.1999.0873 1:CAS:528:DyaK1MXnsF2itLk%3D (Pubitemid 30028596)
23. Z Medarova W Pham C Farrar V Petkova A Moore 2007 In vivo imaging of siRNA delivery and silencing in tumors Nat. Med. 13 372 377 17322898 10.1038/nm1486 1:CAS:528:DC%2BD2sXisVKkurk%3D (Pubitemid 46376679)
24. MG Meyer M Fauver JR Rahn T Neumann FW Patten EJ Seibel AC Nelson 2009 Automated cell analysis in 2D and 3D: a comparative study Patt. Recognit. 41 141 146 10.1016/j.patcog.2008.06.018
25. Q Miao J Hayenga MG Meyer T Neumann AC Nelson EJ Seibel 2010 Resolution improvement in optical projection tomography by the focal scanning method Opt. Lett. 35 3363 3365 20967067 10.1364/OL.35.003363
26. Miao, Q., J. Hayenga, M. Meyer, T. Neumann, F. Patten, A. Nelson, and E. Seibel. High resolution optical projection tomographic microscopy for 3D tissue imaging. In: Three-Dimensional, Multidimensional Microscopy: Image Acquisition, Processing XVIII, Proceedings of SPIE, Vol. 7904, p. 79040L, 2011.
27. Q Miao JR Rahn A Tourovskaia MG Meyer T Neumann AC Nelson EJ Seibel 2009 Dual-modal three-dimensional imaging of single cells with isometric high resolution using an optical projection tomography microscope J. Biomed. Opt. 14 064035 20059273 10.1117/1.3275470
28. Miao, Q., J. Yu, M. G. Meyer, J. R. Rahn, T. Neumann, A. C. Nelson, and E. J. Seibel. Dual-modal optical projection tomography microscopy for cancer diagnosis. In: Three-Dimensional, Multidimensional Microscopy: Image Acquisition, Processing XVIII, Proceedings of SPIE, Vol. 7570, p. 75700H, 2010.
29. Q Miao J Yu J Rahn M Meyer T Neumann A Nelson E Seibel 2010 Dual-mode optical projection tomography microscope using gold nanorods and hematoxylin-stained cancer cells Opt. Lett. 35 1037 1039 20364209 10.1364/OL.35.001037
30. V Nandakumar L Kelbauskas R Johnson D Meldrum 2011 Quantitative characterization of preneoplastic progression using single-cell computed tomography and three-dimensional karyometry Cytometry A 79 25 34 21182180
31. MAA Neil R Juskaitis T Wilson 1997 Method of obtaining optical sectioning by using structured light in a conventional microscope Opt. Lett. 22 1905 1907 18188403 10.1364/OL.22.001905 1:STN:280:DC%2BD1c%2FisVCitA%3D%3D (Pubitemid 127598999)
32. Neumann, T., Q. Miao, J. Yu, M. Fauver, M. Meyer, J. R. Rahn, C. A. Lancaster, E. J. Seibel, and A. C. Nelson. Simultaneous 3D imaging of morphology and nanoparticle distribution in single cells with the Cell-CT technology. In: 30th Annual International IEEE EMBS Conference, pp. 379-381, 2008.
33. N Nitin DJ Javier DM Roblyer RR Kortum 2007 Widefield and high-resolution reflectance imaging of gold and silver nanoparticles J. Biomed. Opt. 12 051505 17994869 10.1117/1.2800314 (Pubitemid 351309590)
34. N Nitin LEW LaConte O Zurkiya X Hu G Bao 2004 Functionalization and peptide-based delivery of magnetic nanoparticles as an intracellular MRI contrast agent J. Biol. Inorg. Chem. 9 706 712 15232722 10.1007/s00775-004-0560- 1 1:CAS:528:DC%2BD2cXnt1Grt7s%3D (Pubitemid 39279249)
35. Pawley, J. B. Handbook of Biological Confocal Microscopy. New York: Springer, 2006.
36. SS Raab DM Grzybicki 2010 Quality in cancer diagnosis CA Cancer J. Clin. 60 139 165 20444999 10.3322/caac.20068
37. Reeves, A. P., E. J. Seibel, M. G. Meyer, T. Apanasovich, and A. Biancardi. Nuclear cytoplasm cell evaluation from 3D Optical CT Microscope images. In: Medical Imaging, Computer-Aided Diagnosis, Proceedings of SPIE, Vol. 8315, p. 8315-121, 2012.
38. J Sharpe U Ahlgren P Perry B Hill A Ross J Hecksher-sorensen R Baldock D Davidson 2002 Optical projection tomography as a tool for 3D microscopy and gene expression studies Science 296 541 545 11964482 10.1126/science.1068206 1:CAS:528:DC%2BD38XjtFCjsLs%3D (Pubitemid 34408675)
39. T Smitha P Sharada HC Girish 2011 Morphometry of the basal cell layer of oral leukoplakia and oral squamous cell carcinoma using computer-aided image analysis J. Oral Maxillofac. Pathol. 15 26 33 21731274 10.4103/0973-029X.80034 1:STN:280:DC%2BC3MnlvVygtg%3D%3D
40. Somrak, T. M., and C. M. Keebler. The Manual of Cytotechnology. Chicago: ASCP Press, 1993.
41. E Sueoka N Sueoka Y Goto S Matsuyama H Nishimura M Sato S Fujimura H Chia H Fujiki 2001 Heterogeneous nuclear ribonulceoprotein B1 as early cancer biomarker for occult cancer of human lungs and bronchial dysplasia Cancer Res. 61 1896 1902 11280744 1:CAS:528:DC%2BD3MXit1Ohu7c%3D (Pubitemid 32692005)
42. JG Umen 2005 The elusive sizer Curr. Opin. Cell Biol. 17 435 441 15978795 10.1016/j.ceb.2005.06.001 1:CAS:528:DC%2BD2MXmt1Sru74%3D (Pubitemid 40968075)
43. JR Walls JG Sled J Sharpe RM Henkelman 2007 Resolution improvement in emission optical projection tomography Phys. Med. Biol. 52 2755 10.1088/0031-9155/52/10/010 (Pubitemid 46705281)
44. A Wax K Sokolov 2009 Molecular imaging and darkfield microspectroscopy of live cells using gold plasmonic nanoparticles Laser Photon. Rev. 3 146 10.1002/lpor.200810011 1:CAS:528:DC%2BD1MXksVWntLo%3D
45. R Weissleder MJ Pittet 2008 Imaging in the era of molecular oncology Nature 452 580 589 18385732 10.1038/nature06917 1:CAS:528:DC%2BD1cXktFCgt7Y%3D (Pubitemid 351483372)
46. BJ Zesking CD Jordan W Timp L Trapani G Waller V Horodincu DJ Ehrlich P Matsudaira 2007 Nucleic acid and protein mass mapping by live-cell deep-ultraviolet microscopy Nat. Methods 4 567 569 10.1038/nmeth1053 (Pubitemid 47214775)
47. J Zhou JL Mulshine EJ Unsworth FM Scott IM Avis MD Vos AM Treston 1996 Purification and characterization of a protein that permits early detection of lung cancer J. Biol. Chem. 18 10760 10766