Molecular beacon probes for the detection of cisplatin-induced DNA damage

Analytical and Bioanalytical Chemistry

Volumn 403, Issue 1, 2012, Pages 179-184

  Shire, Zahra J ^a   Loppnow, Glen R ^a  

^a UNIVERSITY OF ALBERTA   (Canada)

Author keywords

Cisplatin; DNA damage; Fluorescence; Mass spectrometry; Molecular beacon; Nucleic acids

Indexed keywords

ANTICANCER DRUG; CIS-PLATIN; DNA DAMAGE; DNA DAMAGES; LABOUR-INTENSIVE; MALDI TOF MS; MATRIX-ASSISTED LASER DESORPTION/IONIZATION-TIME-OF-FLIGHT MASS SPECTROMETRY; MOLECULAR BEACON; QUANTITATIVE TOOL;

DNA; FLUORESCENCE; MASS SPECTROMETRY; NUCLEIC ACIDS; PLATINUM COMPOUNDS; PROBES;

DAMAGE DETECTION;

ANTINEOPLASTIC AGENT; CISPLATIN;

ARTICLE; DNA DAMAGE; FLUORESCENCE; MASS SPECTROMETRY; MOLECULAR PROBE;

ANTINEOPLASTIC AGENTS; CISPLATIN; DNA DAMAGE; FLUORESCENCE; MOLECULAR PROBES; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

EID: 84858752125     PISSN: 16182642     EISSN: 16182650     Source Type: Journal    
DOI: 10.1007/s00216-012-5790-4     Document Type: Article

References (25)

1. LA Rowe N Degtyareva PW Doetsch 2008 DNA damage-induced reactive oxygen species (ROS) stress response in Saccharomyces cerevisiae Free Radical Biol Med 45 1167 1177 10.1016/j.freeradbiomed.2008.07.018 1:CAS:528:DC%2BD1cXht1SiurrN
2. AB Britt 1995 Repair of DNA damage induced by ultraviolet radiation Plant Physiol 108 891 896 10.1104/pp.108.3.891 1:CAS:528:DyaK2MXmvFGmt74%3D
3. H Wei Q Cal OR Rahn 1996 Inhibition of UV light- and Fenton reaction-induced oxidative DNA damage by the soybean isoflavone genistein Carcinogenesis 17 73 77 10.1093/carcin/17.1.73 1:CAS:528:DyaK28XosFejtA%3D%3D
4. P Hainaut GP Pfeifer 2001 Patterns of p53 G→T transversions in lung cancers reflect the primary mutagenic signature of DNA-damage by tobacco smoke Carcinogenesis 22 367 374 10.1093/carcin/22.3.367 1:CAS:528:DC%2BD3MXitFKhsLc%3D
5. SA Steinert RS Montee MP Sastre 1998 Influence of sunlight on DNA damage in mussels exposed to polycyclic aromatic hydrocarbons Mar Environ Res 46 355 358 10.1016/S0141-1136(97)00088-3 1:CAS:528:DyaK1cXmtVOitr4%3D
6. R Gupta JL Beck MM Sheil SF Ralph 2005 Identification of bifunctional GA and AG intrastrand crosslinks formed between cisplatin and DNA J Inorg Biochem 99 552 559 10.1016/j.jinorgbio.2004.11.001 1:CAS:528:DC%2BD2cXhtFGhsLbN
7. SJ Lippard 1987 Chemistry and molecular biology of platinum anticancer drugs Pure Appl Chem 59 731 742 10.1351/pac198759060731 1:CAS:528: DyaL2sXltVylsL0%3D
8. G Chu 1994 Cellular responses to cisplatin. The roles of DNA-binding proteins and repair J Biol Chem 269 787 790 1:CAS:528:DyaK2cXht1eqtrs%3D
9. F Legendre V Bas J Kozelka J Chottard 2000 A complete kinetic study of GG versus AG platination suggests that the doubly aquated derivatives of cisplatin are the actual DNA binding species Chem Eur J 6 2002 2010 10.1002/1521- 3765(20000602)6:11<2002::AID-CHEM2002>3.0.CO;2-H 1:CAS:528: DC%2BD3cXnslWquro%3D
10. V Bas S Bombard J Chottard J Kozelka 2003 GA and AG sequences of DNA react with cisplatin at comparable rates Chem Eur J 9 4739 4745 10.1002/chem.200305085
11. M Crul RCAM Van Waardenburg JH Beijnen JHM Schellens 2002 DNA-based drug interactions of cisplatin Cancer Treat Rev 28 291 303 10.1016/S0305-7372(02) 00093-2 1:CAS:528:DC%2BD38XpsFyhu7Y%3D
12. F Legendre V Bas J Kozelka J Chottard 1998 GG versus AG platination: a kinetic study on hairpin-stabilized duplex oligonucleotides Inorg Chem 37 3964 3967 10.1021/ic980008y 1:CAS:528:DyaK1cXkvF2jtbs%3D
13. DG Lemaire BP Ruzsicska 1993 Kinetic analysis of the deamination reactions of cyclobutane dimers of thymidylyl-3′,5′-2′- deoxycytidine and 2′-deoxycytidylyl-3′,5′-thymidine Biochemistry 32 2525 2533 10.1021/bi00061a009 1:CAS:528:DyaK3sXhs1Cht78%3D
14. AF Fuciarelli BJ Wegher E Gajewski M Dizdaroglu WF Blakely 1989 Quantitative measurement of radiation-induced base products in DNA using gas chromatography-mass spectrometry Radiat Res 119 219 231 10.2307/3577615 1:CAS:528:DyaL1MXlvFSgtrs%3D
15. 32P-postlabeling analysis Cancer Lett 20 109 114 10.1016/0304- 3835(83)90195-7 1:CAS:528:DyaL3sXltlCrt7w%3D
16. DC Thomas AG Morton VA Bohr A Sancar 1988 General method for quantifying base adducts in specific mammalian genes Proc Natl Acad Sci USA 85 3723 3727 10.1073/pnas.85.11.3723 1:CAS:528:DyaL1cXks1yitLk%3D
17. L Levine E Seaman E Hammerschlag VH Van 1966 Antibodies to photoproducts of deoxyribonucleic acids irradiated with ultraviolet light Science 153 1666 1667 10.1126/science.153.3744.1666 1:CAS:528:DyaF28XkvFenu74%3D
18. RM Santella 1999 Immunological methods for detection of carcinogen-DNA damage in humans Cancer Epdimol Biomark Prev 8 733 739 1:CAS:528: DyaK1MXmsFGkt7c%3D
19. GN Cosma CA Miller III M Costa 1990 The detection of DNA-protein complexes in vitro by an immunological assay Toxic in Vitro 4 17 22 10.1016/0887-2333(90)90004-D 1:CAS:528:DyaK3cXhvFehu7k%3D
20. S Tyagi DP Bratu FR Kramer 1998 Multicolor molecular beacons for allele discrimination Nat Biotechnol 16 49 53 10.1038/nbt0198-49 1:CAS:528: DyaK1cXjsVyqtQ%3D%3D
21. G Bonnet S Tyagi A Libchaber FR Kramer 1999 Thermodynamic basis of the enhanced specificity of structured DNA probes Proc Natl Acad Sci USA 96 6171 6176 10.1073/pnas.96.11.6171 1:CAS:528:DyaK1MXksFKks7k%3D
22. L Tan Y Li TJ Drake L Moroz K Wang J Li A Munteanu CJ Yang K Martinez W Tan 2005 Molecular beacons for bioanalytical applications Analyst 130 1002 1005 10.1039/b500308n 1:CAS:528:DC%2BD2MXltlSiu7w%3D
23. S Yarasi C McConachie GR Loppnow 2005 Molecular beacon probes of photodamage in thymine and uracil oligonucleotides Photochem Photobiol 8 467 473 10.1562/2004-09-02-RA-301.1
24. S Tyagi FR Kramer 1996 Molecular beacons probes that fluoresce upon hybridization Nat Biotechnol 14 303 308 10.1038/nbt0396-303 1:CAS:528: DyaK28XhsFOjsr4%3D
25. 2+ Chem Euro J 2 1068 1076 10.1002/chem.19960020906 1:CAS:528:DyaK28XlvFOqsL0%3D