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Volumn 34, Issue 1, 2012, Pages 18-28

Tree kangaroo molecular systematics based on partial cytochrome b sequences: Are Matschie's tree kangaroo (Dendrolagus matschiei) and Goodfellow's tree kangaroo (D. goodfellowi buergersi) sister taxa?

Author keywords

Huon Peninsula; mitochondrial DNA barcode; Papua New Guinea; phylogenetic species concept; population aggregation analysis

Indexed keywords

DENDROLAGUS; DENDROLAGUS GOODFELLOWI; DENDROLAGUS GOODFELLOWI BUERGERSI; DENDROLAGUS MATSCHIEI; DENDROLAGUS SPADIX; MACROPODIDAE; METATHERIA;

EID: 84858696306     PISSN: 03100049     EISSN: None     Source Type: Journal    
DOI: 10.1071/AM10017     Document Type: Article
Times cited : (6)

References (49)
  • 1
    • 0028194547 scopus 로고
    • Active arc-continent collision: earthquakes, gravity anomalies, and fault kinematics in the Huon-Finisterre collision zone, Papua New Guinea
    • DOI 10.1029/93TC02940
    • Abers, G. A., and McCaffrey, R. (1994). Active arc-continent collision: earthquakes, gravity anomalies, and fault kinematics in the Huon-Finisterre collision zone, Papua New Guinea. Tectonics 13, 227-245. doi:10.1029/93TC02940 (Pubitemid 24427033)
    • (1994) Tectonics , vol.13 , Issue.2 , pp. 227-245
    • Abers, G.A.1    McCaffrey, R.2
  • 2
    • 0016355478 scopus 로고
    • A new look at the statistical model identification
    • doi:10.1109/TAC. 1974.1100705
    • Akaike, H. (1974). A new look at the statistical model identification. IEEE Transactions on Automatic Control 19, 716-723. doi:10.1109/TAC. 1974.1100705
    • (1974) IEEE Transactions on Automatic Control , vol.19 , pp. 716-723
    • Akaike, H.1
  • 4
    • 0038008626 scopus 로고    scopus 로고
    • Tree-kangaroos Dendrolagus in Australia: Are D. lumholtzi and D. bennettianus sister taxa?
    • Bowyer, J. C., Newell, G. R., Metcalfe, C. J., and Eldridge, M. B. D. (2003). Tree-kangaroos Dendrolagus in Australia: are D. lumholtzi and D. bennettianus sister taxa? Australian Zoologist 32, 207-213. (Pubitemid 36815372)
    • (2003) Australian Zoologist , vol.32 , Issue.2 , pp. 207-213
    • Bowyer, J.C.1    Newell, G.R.2    Metcalfe, C.J.3    Eldridge, M.B.D.4
  • 5
    • 0035205972 scopus 로고    scopus 로고
    • A test of the genetic species concept: Cytochrome-b sequences and mammals
    • DOI 10.1644/1545-1542(2001)082<0960:ATOTGS>2.0.CO;2
    • Bradley, R. D., and Baker, R. J. (2001). A test of the genetic species concept: cytochrome-b sequences and mammals. Journal of Mammalogy 82, 960-973. doi:10.1644/1545-1542(2001)0822.0.CO;2 (Pubitemid 33146161)
    • (2001) Journal of Mammalogy , vol.82 , Issue.4 , pp. 960-973
    • Bradley, R.D.1    Baker, R.J.2
  • 6
    • 43949160320 scopus 로고
    • Branch support and tree stability
    • doi:10.1111/j.1096-0031.1994.tb00179.x
    • Bremer, K. (1994). Branch support and tree stability. Cladistics 10, 295-304. doi:10.1111/j.1096-0031.1994.tb00179.x
    • (1994) Cladistics , vol.10 , pp. 295-304
    • Bremer, K.1
  • 7
    • 0002047502 scopus 로고
    • Speciation and its ontology: The empirical consequences of alternative species concepts for understanding patterns and processes of differentiation
    • Eds D. Otte and J. A. Endler Sinauer Associates, Inc.: Sunderland, MA
    • Cracraft, J. (1989). Speciation and its ontology: the empirical consequences of alternative species concepts for understanding patterns and processes of differentiation. In 'Speciation and its Consequences'. (Eds D. Otte and J. A. Endler.) pp. 28-59. (Sinauer Associates, Inc.: Sunderland, MA.)
    • (1989) Speciation and Its Consequences , pp. 28-59
    • Cracraft, J.1
  • 8
    • 11944258898 scopus 로고
    • Populations, genetic variation, and the delimitation of phylogenetic species
    • Davis, J. I., and Nixon, K. C. (1992). Populations, genetic variation, and the delimitation of phylogenetic species. Systematic Biology 41, 421-435.
    • (1992) Systematic Biology , vol.41 , pp. 421-435
    • Davis, J.I.1    Nixon, K.C.2
  • 9
    • 2442682801 scopus 로고    scopus 로고
    • A new Pliocene tree kangaroo species (Marsupialia, Macropodinae) from the Chinchilla Local Fauna, southeastern Queensland
    • Dawson, L. (2004). A new pliocene tree kangaroo species (Marsupialia, Macropodinae) from the Chinchilla Local Fauna, southeastern Queensland. Alcheringa 28, 267-273. doi:10.1080/03115510408619284 (Pubitemid 38672466)
    • (2004) Alcheringa , vol.28 , Issue.1 , pp. 267-273
    • Dawson, L.1
  • 10
    • 33748949249 scopus 로고    scopus 로고
    • Species discovery versus species identification in DNA barcoding efforts: Response to Rubinoff
    • DOI 10.1111/j.1523-1739.2006.00543.x
    • DeSalle, R. (2006). Species discovery versus species identification in DNA barcoding efforts: response to Rubinoff. Conservation Biology 20, 1545-1547. doi:10.1111/j.1523-1739.2006.00543.x (Pubitemid 44436031)
    • (2006) Conservation Biology , vol.20 , Issue.5 , pp. 1545-1547
    • DeSalle, R.1
  • 12
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • doi:10.2307/2408678
    • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791. doi:10.2307/2408678
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 13
    • 0004282828 scopus 로고
    • 2nd edn. (Cornell University Press: New York.)
    • Flannery, T. F. (1995). 'Mammals of New Guinea.' 2nd edn. (Cornell University Press: New York.)
    • (1995) Mammals of New Guinea
    • Flannery, T.F.1
  • 14
    • 0021568388 scopus 로고
    • The macropodoids (Marsupialia) of the early Pliocene Bow local fauna, central eastern New South Wales.
    • Flannery, T. F., and Archer, M. (1984). The macropodoids (Marsupialia) of the early Pliocene Bow Local Fauna, central eastern New South Wales. Australian Zoologist 21, 357-383. (Pubitemid 16299657)
    • (1984) Australian Zoologist , vol.21 , Issue.4-5 , pp. 357-383
    • Flannery, T.F.1    Archer, M.2
  • 16
    • 0029476674 scopus 로고
    • A new tree-kangaroo (Dendrolagus: Marsupialia) from Irian Jaya, Indonesia, with notes on ethnography and the evolution of tree- kangaroos
    • Flannery, T. F., Boeadi, and Szalay, A. L. (1995). A new tree-kangaroo (Dendrolagus: Marsupialia) from Irian Jaya, Indonesia, with notes on ethnography and the evolution of tree-kangaroos. Mammalia 59, 65-84. doi:10.1515/mamm.1995. 59.1.65 (Pubitemid 26452690)
    • (1995) Mammalia , vol.59 , Issue.1 , pp. 65-84
    • Flannery, T.F.1    Boeadi2    Szalay, A.L.3
  • 18
    • 0034030001 scopus 로고    scopus 로고
    • Conservation genetics at the species boundary
    • DOI 10.1046/j.1523-1739.2000.98122.x
    • Goldstein, P. Z., DeSalle, R., Amato, G., and Vogler, A. P. (2000). Conservation genetics at the species boundary. Conservation Biology 14, 120-131. doi:10.1046/j.1523-1739.2000.98122.x (Pubitemid 30187749)
    • (2000) Conservation Biology , vol.14 , Issue.1 , pp. 120-131
    • Goldstein, P.Z.1    Desalle, R.2    Amato, G.3    Vogler, A.P.4
  • 19
    • 0038750244 scopus 로고
    • The systematics of tree kangaroos (Dendrolagus; Marsupalia, Macropodidae)
    • Groves, C. P. (1982). The systematics of tree kangaroos (Dendrolagus; Marsupalia, Macropodidae). Australian Mammalogist 5, 157-186.
    • (1982) Australian Mammalogist , vol.5 , pp. 157-186
    • Groves, C.P.1
  • 20
    • 77955053641 scopus 로고    scopus 로고
    • Order diprotodontia
    • Eds D. E. Wilson and D. M.Reeder (Johns Hopkins University Press: Baltimore.)
    • Groves, C. P. (2005). Order Diprotodontia. In 'Mammal Species of the World'. (Eds D. E. Wilson and D. M.Reeder.) pp. 43-70. (Johns Hopkins University Press: Baltimore.)
    • (2005) Mammal Species of the World , pp. 43-70
    • Groves, C.P.1
  • 21
    • 0022376704 scopus 로고
    • Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
    • DOI 10.1007/BF02101694
    • Hasegawa, M., Kishino, H., and Yano, T. (1985). Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. Journal of Molecular Evolution 22, 160-174. doi:10.1007/BF02101694 (Pubitemid 16227864)
    • (1985) Journal of Molecular Evolution , vol.22 , Issue.2 , pp. 160-174
    • Hasegawa, M.1    Kishino, H.2    Yano, T.3
  • 22
    • 0026562079 scopus 로고
    • The number of replications needed for accurate estimation of the bootstrap p value in phylogenetic studies
    • Hedges, S. B. (1992). The number of replications needed for accurate estimation of the bootstrap p value in phylogenetic studies. Molecular Biology and Evolution 9, 366-369.
    • (1992) Molecular Biology and Evolution , vol.9 , pp. 366-369
    • Hedges, S.B.1
  • 23
    • 52749087424 scopus 로고    scopus 로고
    • A taxonomic and geographic overview of the mammals of Papua
    • Eds A. J. Marshall and B. M. Beehler (Periplus Editions: Singapore.)
    • Helgen, K. M. (2007). A taxonomic and geographic overview of the mammals of Papua. In 'The Ecology of Papua'. (Eds A. J. Marshall and B. M. Beehler.) pp. 689-749. (Periplus Editions: Singapore.)
    • (2007) The Ecology of Papua , pp. 689-749
    • Helgen, K.M.1
  • 24
    • 84879881149 scopus 로고    scopus 로고
    • Landslide-driven drainage network evolution in a pre-steady-state mountain belt: Finisterre Mountains, Papua New Guinea
    • Hovius, N., Stark, C. P., Tutton, M. A., and Abbott, L. D. (1998). Landslidedriven drainage network evolution in a pre-steady-state mountain belt: Finisterre Mountains, Papua New Guinea. Geology 26, 1071-1074. doi:10.1130/0091-7613(1998)0262.3.CO;2 (Pubitemid 29160743)
    • (1998) Geology , vol.26 , Issue.12 , pp. 1071-1074
    • Hovius, N.1    Stark, C.P.2    Tutton, M.A.3    Abbott, L.D.4
  • 25
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogeny
    • (Oxford, England) doi:10.1093/bioinformatics/17.8.754
    • Huelsenbeck, J. P., and Ronquist, F. (2001). MRBAYES: Bayesian inference of phylogeny. Bioinformatics (Oxford, England) 17, 754-755. doi:10.1093/ bioinformatics/17.8.754
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 26
    • 0025764044 scopus 로고
    • Evolution of the cytochrome b gene of mammals
    • doi:10.1007/BF02515385
    • Irwin, D. M., Kocher, T. D., and Wilson, A. C. (1991). Evolution of the cytochrome b gene of mammals. Journal of Molecular Evolution 32, 128-144. doi:10.1007/BF02515385
    • (1991) Journal of Molecular Evolution , vol.32 , pp. 128-144
    • Irwin, D.M.1    Kocher, T.D.2    Wilson, A.C.3
  • 27
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • DOI 10.1007/BF01731581
    • Kimura, M. (1980). A simple method for estimating evolutionary rate of base substitution through comparative studies of nucleotide sequences. Journal of Molecular Evolution 16, 111-120. doi:10.1007/BF01731581 (Pubitemid 11166431)
    • (1980) Journal of Molecular Evolution , vol.16 , Issue.2 , pp. 111-120
    • Kimura, M.1
  • 28
    • 0028363062 scopus 로고
    • Numt, a recent transfer and tandem amplification of mitochondrial DNA to the nuclear genome of the domestic cat
    • Lopez, J. V., Yuhki, N., Masuda, R., Modi, W., and O'Brien, S. J. (1994). Numt, a recent transfer and tandem amplification of mitochondrial DNA to the nuclear genome of the domestic cat. Journal of Molecular Evolution 39, 174-190. (Pubitemid 24226417)
    • (1994) Journal of Molecular Evolution , vol.39 , Issue.2 , pp. 174-190
    • Lopez, J.V.1    Yuhki, N.2    Masuda, R.3    Modi, W.4    O'Brien, S.J.5
  • 30
    • 67449085851 scopus 로고    scopus 로고
    • Genetic diversity in captive and wild Matschie's tree kangaroo (Dendrolagus matschiei) from Huon Peninsula, Papua New Guinea, based on mtDNA control region sequences
    • doi:10.1002/zoo.20222
    • McGreevy, T. J., Jr, Dabek, L., Gomez-Chiarri, M., and Husband, T. P. (2009). Genetic diversity in captive and wild Matschie's tree kangaroo (Dendrolagus matschiei) from Huon Peninsula, Papua New Guinea, based on mtDNA control region sequences. Zoo Biology 28, 183-196. doi:10.1002/zoo.20222
    • (2009) Zoo Biology , vol.28 , pp. 183-196
    • McGreevy Jr., T.J.1    Dabek, L.2    Gomez-Chiarri, M.3    Husband, T.P.4
  • 31
    • 77949334876 scopus 로고    scopus 로고
    • Amultiplex PCR assay to distinguish among three sympatric marsupial taxa from Huon Peninsula, Papua New Guinea, using the mitochondrial control region gene
    • doi:10.1111/j.1755-0998.2009.02758.x
    • McGreevy, T. J., Jr, Dabek, L., and Husband, T. P. (2010).Amultiplex PCR assay to distinguish among three sympatric marsupial taxa from Huon Peninsula, Papua New Guinea, using the mitochondrial control region gene. Molecular Ecology Resources 10, 397-400. doi:10.1111/j.1755-0998.2009.02758.x
    • (2010) Molecular Ecology Resources , vol.10 , pp. 397-400
    • McGreevy Jr., T.J.1    Dabek, L.2    Husband, T.P.3
  • 32
    • 0034503191 scopus 로고    scopus 로고
    • Diversification of rainforest faunas: An integrated molecular approach
    • DOI 10.1146/annurev.ecolsys.31.1.533
    • Moritz, C., Patton, J. L., Schneider, C. J., and Smith, T. B. (2000). Diversification of rainforest faunas: an integrated molecular approach. Annual Review of Ecology and Systematics 31, 533-563. doi:10.1146/annurev.ecolsys.31.1. 533 (Pubitemid 32122412)
    • (2000) Annual Review of Ecology and Systematics , vol.31 , pp. 533-563
    • Moritz, C.1    Patton, J.L.2    Schneider, C.J.3    Smith, T.B.4
  • 33
    • 9644301241 scopus 로고    scopus 로고
    • Model selection and model averaging in phylogenetics: Advantages of akaike information criterion and bayesian approaches over likelihood ratio tests
    • DOI 10.1080/10635150490522304
    • Posada, D., and Buckley, T. R. (2004). Model selection and model averaging in phylogenetics: advantages of Akaike Information Criterion and Baysian approaches over likelihood ratio tests. Systematic Biology 53, 793-808. doi:10.1080/10635150490522304 (Pubitemid 39568279)
    • (2004) Systematic Biology , vol.53 , Issue.5 , pp. 793-808
    • Posada, D.1    Buckley, T.R.2
  • 34
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: Testing the model of DNA substitution
    • Posada, D., and Crandall, K. A. (1998). MODELTEST: testing the model of DNA substitution. Bioinformatics (Oxford, England) 14, 817-818. doi:10.1093/bioinformatics/14.9.817 (Pubitemid 28552116)
    • (1998) Bioinformatics , vol.14 , Issue.9 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 35
    • 47249103383 scopus 로고    scopus 로고
    • A new Pleistocene tree-kangaroo (Diprotodontia: Macropodidae) from the Nullarbor Plain of south-central Australia
    • DOI 10.1671/0272-4634(2008)28[463:ANPTDM]2.0.CO;2
    • Prideaux, G. J., and Warburton, N. M. (2008). A new Pleistocene treekangaroo (Diprotodontia: Macropodidae) from the Nullarbor Plain of south-central Australia. Journal of Vertebrate Paleontology 28, 463-478. doi:10.1671/0272-4634(2008)28[463:ANPTDM]2.0.CO;2 (Pubitemid 351983306)
    • (2008) Journal of Vertebrate Paleontology , vol.28 , Issue.2 , pp. 463-478
    • Prideaux, G.J.1    Warburton, N.M.2
  • 36
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • DOI 10.1093/bioinformatics/btg180
    • Ronquist, F., and Huelsenbeck, J. P. (2003). MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics (Oxford, England) 19, 1572-1574. doi:10.1093/bioinformatics/btg180 (Pubitemid 37038874)
    • (2003) Bioinformatics , vol.19 , Issue.12 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 39
    • 33746354571 scopus 로고    scopus 로고
    • Utility of mitochondrial DNA barcodes in species conservation
    • DOI 10.1111/j.1523-1739.2006.00372.x
    • Rubinoff, D. (2006a). Utility of mitochondrial DNA barcodes in species conservation. Conservation Biology 20, 1026-1033. doi:10.1111/j.1523-1739.2006. 00372.x (Pubitemid 44116737)
    • (2006) Conservation Biology , vol.20 , Issue.4 , pp. 1026-1033
    • Rubinoff, D.1
  • 40
    • 33748939768 scopus 로고    scopus 로고
    • DNA barcoding evolves into the familiar
    • DOI 10.1111/j.1523-1739.2006.00542.x
    • Rubinoff, D. (2006b).DNAbarcoding evolves into the familiar. Conservation Biology 20, 1548-1549. doi:10.1111/j.1523-1739.2006.00542.x (Pubitemid 44436032)
    • (2006) Conservation Biology , vol.20 , Issue.5 , pp. 1548-1549
    • Rubinoff, D.1
  • 41
    • 29244458162 scopus 로고    scopus 로고
    • Are plant DNA barcodes a search for the Holy Grail?
    • DOI 10.1016/j.tree.2005.10.019, PII S0169534705003563
    • Rubinoff, D., Cameron, S., and Will, K. (2006a). Are plant DNA barcodes a search for the Holy Grail? Trends in Ecology & Evolution 21, 1-2. doi:10.1016/j.tree.2005.10.019 (Pubitemid 41827454)
    • (2006) Trends in Ecology and Evolution , vol.21 , Issue.1 , pp. 1-2
    • Rubinoff, D.1    Cameron, S.2    Will, K.3
  • 42
    • 33845914892 scopus 로고    scopus 로고
    • A genomic perspective on the shortcomings of mitochondrial DNA for "barcoding" identification
    • DOI 10.1093/jhered/esl036
    • Rubinoff, D., Cameron, S., and Will, K. (2006b). A genomic perspective on the shortcomings of mitochondrial DNA for "Barcoding" identification. The Journal of Heredity 97, 581-594. doi:10.1093/jhered/esl036 (Pubitemid 46033025)
    • (2006) Journal of Heredity , vol.97 , Issue.6 , pp. 581-594
    • Rubinoff, D.1    Cameron, S.2    Will, K.3
  • 43
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N., and Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 4, 406-425.
    • (1987) Molecular Biology and Evolution , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 44
    • 63849131105 scopus 로고    scopus 로고
    • Version 3. Boston University, Boston, MA
    • Sorenson, M. D., and Franzosa, E. A. (2007). TreeRot. Version 3. Boston University, Boston, MA. Available at http://people.bu.edu/msoren/TreeRot.html.
    • (2007) TreeRot
    • Sorenson, M.D.1    Franzosa, E.A.2
  • 46
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • DOI 10.1093/molbev/msm092
    • Tamura, K., Dudley, J., Nei, M., and Kumar, S. (2007). MEGA4: Molecular Evolutionary Genetics Analysis(MEGA)software version 4.0. Molecular Biology and Evolution 24, 1596-1599. doi:10.1093/molbev/msm092 (Pubitemid 47236692)
    • (2007) Molecular Biology and Evolution , vol.24 , Issue.8 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 48
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J., Higgins, D. G., and Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequences alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22, 4673-4680. doi:10.1093/nar/22.22.4673 (Pubitemid 24354800)
    • (1994) Nucleic Acids Research , vol.22 , Issue.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 49
    • 3843095630 scopus 로고    scopus 로고
    • Phylogenetic analysis: The basic method
    • (Eds R. DeSalle, G. Giribet and W. Wheeler) (Birkhauser Verlag: Basel.)
    • Wenzel, J. W. (2002). Phylogenetic analysis: the basic method. In 'Techniques in Molecular Systematics and Evolution'. (Eds R. DeSalle, G. Giribet and W. Wheeler.) pp. 4-30. (Birkhauser Verlag: Basel.)
    • (2002) Techniques in Molecular Systematics and Evolution , pp. 4-30
    • Wenzel, J.W.1


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