GPI-anchor synthesis is indispensable for the germline development of the nematode Caenorhabditis elegans

Molecular Biology of the Cell

Volumn 23, Issue 6, 2012, Pages 982-995

  Murata, Daisuke ^a,b   Nomura, Kazuko H ^a,b   Dejima, Katsufumi ^a,b,e   Mizuguchi, Souhei ^a,b,f   Kawasaki, Nana ^b,c   Matsuishi Nakajima, Yukari ^b,c   Ito, Satsuki ^b,c   Gengyo Ando, Keiko ^b,d,g   Kage Nakadai, Eriko ^b,d   Mitani, Shohei ^b,d   Nomura, Kazuya ^a,b  

^a KYUSHU UNIVERSITY   (Japan)

^b JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

^c NATIONAL INSTITUTE OF HEALTH SCIENCES   (Japan)

^d TOKYO WOMEN'S MEDICAL UNIVERSITY   (Japan)

^e UNIVERSITY OF MINNESOTA   (United States)

^f KUMAMOTO UNIVERSITY   (Japan)

^g SAITAMA UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CAENORHABDITIS ELEGANS PROTEIN; DMP2 PROTEIN; GAA1 PROTEIN; GLYCOSYLPHOSPHATIDYLINOSITOL; MPDU1 PROTEIN; PIGA 1 PROTEIN; PIGF PROTEIN; PIGH PROTEIN; PIGK PROTEIN; PIGL PROTEIN; PIGO PROTEIN; PIGP PROTEIN; PIGU PROTEIN; PIGV PROTEIN; PIGY PROTEIN; UNCLASSIFIED DRUG;

ARTICLE; CAENORHABDITIS ELEGANS; CATALYSIS; EMBRYO DEVELOPMENT; GENE INACTIVATION; GERM LINE; MITOSIS; NONHUMAN; NULL ALLELE; OOCYTE; OOCYTE DEVELOPMENT; PHENOTYPE; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN SYNTHESIS; RNA INTERFERENCE; STEM CELL; STEM CELL NICHE;

ANIMALS; CAENORHABDITIS ELEGANS; CAENORHABDITIS ELEGANS PROTEINS; GENE KNOCKDOWN TECHNIQUES; GERM CELLS; GLYCOSYLPHOSPHATIDYLINOSITOLS; GONADS; MEMBRANE PROTEINS;

CAENORHABDITIS ELEGANS;

EID: 84858433881     PISSN: 10591524     EISSN: 19394586     Source Type: Journal    
DOI: 10.1091/mbc.E10-10-0855     Document Type: Article

References (58)

1. Agostoni E, Gobessi S, Petrini E, Monte M, Schneider C (2002). Cloning and characterization of the C. elegans gas1 homolog: phas-1. Biochim Biophys Acta 1574, 1-9. (Pubitemid 34310153)
2. Almeida AM et al. (2006). Hypomorphic promoter mutation in PIGM causes inherited glycosylphosphatidylinositol deficiency. Nat Med 12, 846-851. (Pubitemid 44050077)
3. Almeida A, Layton M, Karadimitris A (2009). Inherited glycosylphosphatidyl inositol deficiency: a treatable CDG. Biochim Biophys Acta 1792, 874-880.
4. Bando T, Ikeda T, Kagawa H (2005). The homeoproteins MAB-18 and CEH-14 insulate the dauer collagen gene col-43 from activation by the adjacent promoter of the spermatheca gene sth-1 in Caenorhabditis elegans. J Mol Biol 348, 101-112. (Pubitemid 40461843)
5. Boulin T, Pocock R, Hobert O (2006). A novel Eph receptor-interacting IgSF protein provides C. elegans motoneurons with midline guidepost function. Curr Biol 16, 1871-1883. (Pubitemid 44486763)
6. Brenner S (1974). The genetics of Caenorhabditis elegans. Genetics 77, 71-94.
7. Brodsky RA, Mukhina GL, Li S, Nelson KL, Chiurazzi PL, Buckley JT, Borowitz MJ (2000). Improved detection and characterization of paroxysmal nocturnal hemoglobinuria using fluorescent aerolysin. Am J Clin Pathol 114, 459-466. (Pubitemid 33049682)
8. Byrd DT, Kimble J (2009). Scratching the niche that controls Caenorhabditis elegans germline stem cells. Semin Cell Dev Biol 20, 1107-1113.
9. Cinquin O, Crittenden SL, Morgan DE, Kimble J (2010). Progression from a stem cell-like state to early differentiation in the C. elegans germ line. Proc Natl Acad Sci USA 107, 2048-2053.
10. Dejima K et al. (2010). Two Golgi-resident 3′-phosphoadenosine 5′-phosphosulfate transporters play distinct roles in heparan sulfate modifications and embryonic and larval development in Caenorhabditis elegans. J Biol Chem 285, 24717-24728.
11. Dunn DE, Yu J, Nagarajan S, Devetten M, Weichold FF, Medof ME, Young NS, Liu JM (1996). A knock-out model of paroxysmal nocturnal hemoglobinuria: Pig-a(-) hematopoiesis is reconstituted following intercellular transfer of GPI-anchored proteins. Proc Natl Acad Sci USA 93, 7938-7943.
12. Eisenhaber F, Eisenhaber B, Kubina W, Maurer-Stroh S, Neuberger G, Schneider G, Wildpaner M (2003). Prediction of lipid posttranslational modifications and localization signals from protein sequences, big-Pi, NMT and PTS1. Nucleic Acids Res 31, 3631-3634. (Pubitemid 37442211)
13. Fankhauser N, Maser P (2005). Identification of GPI anchor attachment signals by a Kohonen self-organizing map. Bioinformatics 21, 1846-1852. (Pubitemid 40668020)
14. Foehr ML, Lindy AS, Fairbank RC, Amin NM, Xu M, Yanowitz J, Fire AZ, Liu J (2006). An antagonistic role for the C. elegans Schnurri homolog SMA-9 in modulating TGFβ signaling during mesodermal patterning. Development 133, 2887-2896. (Pubitemid 44314266)
15. Fuller MT, Spradling AC (2007). Male and female Drosophila germline stem cells: Two versions of immortality. Science 316, 402-404. (Pubitemid 46651479)
16. Gengyo-Ando K, Mitani S (2000). Characterization of mutations induced by ethyl methanesulfonate, UV, and trimethylpsoralen in the nematode Caenorhabditis elegans. Biochem Biophys Res Commun 269, 64-69. (Pubitemid 30440255)
17. Gengyo-Ando K, Yoshina S, Inoue H, Mitani S (2006). An efficient transgenic system by TA cloning vectors and RNAi for C. elegans. Biochem Biophys Res Commun 349, 1345-1350. (Pubitemid 44416405)
18. Green RA, Audhya A, Pozniakovsky A, Dammermann A, Pemble H, Monen J, Portier N, Hyman A, Desai A, Oegema K (2008). Expression and imaging of fluorescent proteins in the C. elegans gonad and early embryo. Methods Cell Biol 85, 179-218.
19. Gumienny TL, MacNeil LT, Wang H, de Bono M, Wrana JL, Padgett RW (2007). Glypican LON-2 is a conserved negative regulator of BMP-like signaling in Caenorhabditis elegans. Curr Biol 17, 159-164. (Pubitemid 46107828)
20. Guo Z, Wang Z (2009). The glypican Dally is required in the niche for the maintenance of germline stem cells and short-range BMP signaling in the Drosophila ovary. Development 136, 3627-3635.
21. Hall DH, Winfrey VP, Blaeuer G, Hoffman LH, Furuta T, Rose KL, Hobert O, Greenstein D (1999). Ultrastructural features of the adult hermaphrodite gonad of Caenorhabditis elegans: relations between the germ line and soma. Dev Biol 212, 101-123. (Pubitemid 29368340)
22. Hayashi Y, Kobayashi S, Nakato H (2009). Drosophila glypicans regulate the germline stem cell niche. J Cell Biol 187, 473-480.
23. Henderson ST, Gao D, Lambie EJ, Kimble J (1994). lag-2 may encode a signaling ligand for the GLP-1 and LIN-12 receptors of C. elegans. Development 120, 2913-2924.
24. Hendzel MJ, Wei Y, Mancini MA, Van Hooser A, Ranalli T, Brinkley BR, Bazett-Jones DP, Allis CD (1997). Mitosis-specific phosphorylation of histone H3 initiates primarily within pericentromeric heterochromatin during G2 and spreads in an ordered fashion coincident with mitotic chromosome condensation. Chromosoma 106, 348-360. (Pubitemid 27510848)
25. Hong Y, Ohishi K, Inoue N, Kang JY, Shime H, Horiguchi Y, van der Goot FG, Sugimoto N, Kinoshita T (2002). Requirement of N-glycan on GPI-anchored proteins for efficient binding of aerolysin but not Clostridium septicumα-toxin. EMBO J 21, 5047-5056.
26. Hooper NM (1992). Identification of a glycosylphosphatidylinositol anchor on membrane proteins. In: Lipid Modification of Proteins: A Practical Approach, eds. Hooper NM, Turner AJ, Oxford: IRL Press, 89-115.
27. Hudson ML, Kinnunen T, Cinar HN, Chisholm AD (2006). C. elegans Kallmann syndrome protein KAL-1 interacts with syndecan and glypican to regulate neuronal cell migrations. Dev Biol 294, 352-365. (Pubitemid 43866675)
28. Ikezawa H (2002). Glycosylphosphatidylinositol (GPI)-anchored proteins. Biol Pharm Bull 25, 409-417.
29. Johnston WL, Krizus A, Dennis JW (2006). The eggshell is required for meiotic fidelity, polar-body extrusion and polarization of the C. elegans embryo. BMC Biol 4, 35.
30. Kachur TM, Audhya A, Pilgrim DB (2008). UNC-45 is required for NMY-2 contractile function in early embryonic polarity establishment and germline cellularization in C. elegans. Dev Biol 314, 287-299.
31. Kaitna S, Schnabel H, Schnabel R, Hyman AA, Glotzer M (2002). A ubiquitin C-terminal hydrolase is required to maintain osmotic balance and execute actin dependent processes in the early C. elegans embryo. J Cell Sci 115, 2293-2302. (Pubitemid 34752973)
32. Kamath RS, Ahringer J (2003). Genome-wide RNAi screening in Caenorhabditis elegans. Methods 30, 313-321. (Pubitemid 36793968)
33. Kawagoe K, Kitamura D, Okabe M, Taniuchi I, Ikawa M, Watanabe T, Kinoshita T, Takeda J (1996). Glycosylphosphatidylinositol-anchor-deficient mice: implications for clonal dominance of mutant cells in paroxysmal nocturnal hemoglobinuria. Blood 87, 3600-3606. (Pubitemid 26129587)
34. Keller P, Tremml G, Rosti V, Bessler M (1999). X inactivation and somatic cell selection rescue female mice carrying a Piga-null mutation. Proc Natl Acad Sci USA 96, 7479-7483. (Pubitemid 29299687)
35. Kelly WG, Xu S, Montgomery MK, Fire A (1997). Distinct requirements for somatic and germline expression of a generally expressed Caenorhabditis elegans gene. Genetics 146, 227-238. (Pubitemid 27194401)
36. Kinoshita T, Murakami Y, Morita YS (2007). Diseases associated with GPI anchors. In: Comprehensive Glycoscience, Vol 4, Chapter 4.21, ed. JP Kamerling, Amsterdam: Elsevier, 393-419.
37. Kitagawa H et al. (2007). Expression of rib-1, a Caenorhabditis elegans homolog of the human tumor suppressor EXT genes, is indispensable for heparan sulfate synthesis and embryonic morphogenesis. J Biol Chem 282, 8533-8544. (Pubitemid 47093586)
38. Krawitz PM et al. (2010). Identity-by-descent filtering of exome sequence data identifies PIGV mutations in hyperphosphatasia mental retardation syndrome. Nat Gen 42, 827-829.
39. Lingwood D, Simons K (2010). Lipid rafts as a membrane-organizing principle. Science 327, 46-50.
40. Mello C, Fire A (1995). DNA transformation. Methods Cell Biol 48, 451-482.
41. Müller G (2010). Oral delivery of protein drugs: driver for personalized medicine? Curr Issues Mol Biol 13, 13-24.
42. Nishimura J, Murakami Y, Kinoshita T (1999). Paroxysmal nocturnal hemoglobinuria: an acquired genetic disease. Am J Hematol 62, 175-182. (Pubitemid 29521765)
43. 2+-dependent cell-cell adhesion in the Xenopus blastula. Dev Genes Evol 208, 9-18.
44. Nozaki M, Ohishi K, Yamada N, Kinoshita T, Nagy A, Takeda J (1999). Developmental abnormalities of glycosylphosphatidylinositol-anchor-deficient embryos revealed by Cre/loxP system. Lab Invest 79, 293-299. (Pubitemid 29166444)
45. Partridge FA, Tearle AW, Gravato-Nobre MJ, Schafer WR, Hodgkin J (2008). The C. elegans glycosyltransferase BUS-8 has two distinct and essential roles in epidermal morphogenesis. Dev Biol 317, 549-559.
46. Pierleoni A, Martelli PL, Casadio R (2008). PredGPI: a GPI-anchor predictor. BMC Bioinformatics 9, 392.
47. Poisson G, Chauve C, Chen X, Bergeron A (2007). FragAnchor: a large-scale predictor of glycosylphosphatidylinositol anchors in eukaryote protein sequences by qualitative scoring. Genomics Proteomics Bioinformatics 5, 121-130. (Pubitemid 47430313)
48. Rao W, Isaac RE, Keen JN (2011). An analysis of the Caenorhabditis elegans lipid raft proteome using geLC-MS/MS. J Proteomics 74, 242-253.
49. Rappleye CA, Paredez AR, Smith CW, McDonald KL, Aroian RV (1999). The coronin-like protein POD-1 is required for anterior-posterior axis formation and cellular architecture in the nematode Caenorhabditis elegans. Genes Dev 13, 2838-2851.
50. Rosti V, Tremml G, Soares V, Pandolfi PP, Luzzatto L, Bessler M (1997). Murine embryonic stem cells without pig-a gene activity are competent for hematopoiesis with the PNH phenotype but not for clonal expansion. J Clin Invest 100, 1028-1036. (Pubitemid 27386286)
51. Sato M, Grant BD, Harada A, Sato K (2008). Rab11 is required for synchronous secretion of chondroitin proteoglycans after fertilization in Caenorhabditis elegans. J Cell Sci 121, 3177-3186.
52. Strange K, Christensen M, Morrison R (2007). Primary culture of Caenorhabditis elegans developing embryo cells for electrophysiological, cell biological and molecular studies. Nat Protoc 2, 1003-1012. (Pubitemid 46745596)
53. Strome S, Powers J, Dunn M, Reese K, Malone CJ, White J, Seydoux G, Saxton W (2001). Spindle dynamics and the role ofγ-tubulin in early Caenorhabditis elegans embryos. Mol Biol Cell 12, 1751-1764. (Pubitemid 33049727)
54. Timmons L, Court DL, Fire A (2001). Ingestion of bacterially expressed dsRNAs can produce specific and potent genetic interference in Caenorhabditis elegans. Gene 263, 103-112. (Pubitemid 32167059)
55. Tsukahara K et al. (2003). Medicinal genetics approach towards identifying the molecular target of a novel inhibitor of fungal cell wall assembly. Mol Microbiol 48, 1029-1042. (Pubitemid 36628267)
56. Voutev R, Keating R, Hubbard EJA, Vallier LG (2009). Characterization of the Caenorhabditis elegans Islet LIM-homeodomain ortholog, lim-7. FEBS Lett 583, 456-464.
57. Wang X, Zhao Y, Wong K, Ehlers P, Kohara Y, Jones SJ, Marra MA, Holt RA, Moerman DG, Hansen D (2009). Identification of genes expressed in the hermaphrodite germ line of C. elegans using SAGE. BMC Genomics 10, 213.
58. Yamashita K, Fukushima K (2007). Carbohydrate recognition by cytokines and its relevance to their physiological activities. In: Comprehensive Glycoscience, Vol. 3, Chapter 3.25, ed. JP Kamerling, Amsterdam: Elsevier, 539-562.