Postglacial north-south expansion of populations of Rhizophora mangle (Rhizophoraceae) along the Brazilian coast revealed by microsatellite analysis

American Journal of Botany

Volumn 98, Issue 6, 2011, Pages 1031-1039

  Pil, Maria W ^a   Boeger, Maria R T ^a   Muschner, Valéria C ^a   Pie, Marcio R ^a   Ostrensky, Antonio ^a   Boeger, Walter A ^a  

^a FEDERAL UNIVERSITY OF PARANÁ   (Brazil)

Author keywords

Genetic structure; Genetic variability; Mangrove; Microsatellites; Propagule dispersal; Rhizophora mangle; Rhizophoraceae

Indexed keywords

MICROSATELLITE DNA;

ALLELE; COLONIZATION; GENE FLOW; GENETIC MARKER; GENETIC STRUCTURE; GENETIC VARIATION; INTERTIDAL ENVIRONMENT; LAST GLACIAL; MANGROVE; PROPAGULE;

ALLELE; ARTICLE; BRAZIL; ECOSYSTEM; GENE LOCUS; GENETIC VARIABILITY; GENETICS; GEOGRAPHY; GROWTH, DEVELOPMENT AND AGING; HETEROZYGOTE; ICE COVER; PHYLOGENY; POPULATION DYNAMICS; POPULATION GENETICS; RHIZOPHORACEAE;

ALLELES; BRAZIL; ECOSYSTEM; GENETIC LOCI; GENETIC VARIATION; GENETICS, POPULATION; GEOGRAPHY; HETEROZYGOTE; ICE COVER; MICROSATELLITE REPEATS; PHYLOGENY; POPULATION DYNAMICS; RHIZOPHORACEAE;

ATLANTIC OCEAN; BRAZIL;

RHIZOPHORA MANGLE; RHIZOPHORACEAE;

EID: 84858423159     PISSN: 00029122     EISSN: None     Source Type: Journal    
DOI: 10.3732/ajb.1000392     Document Type: Article

References (59)

1. Ab'Saber, A. N. 2000. Spaces occupied by the expansion of dry climates in South America during the Quaternary ice ages. Revista do Instituto Geológico 21: 71-78. do Amaral, P. G. C., M. Ledru, F. R. Branco, and P. C. F. Giannini. 2006. Late Holocene development of a mangrove ecosystem in southeastern Brazil (Itanhaém, state of São Paulo). Palaeogeography, Palaeoclimatology, Palaeoecology 241: 608-620.
2. Arbeláez-Cortes, E., M. F. Castillo-Cárdenas, N. Toro-Perea, and H. Cárdenas-Henao. 2007. Genetic structure of the red mangrove (Rhizophora mangle L.) on the Colombian Pacific detected by microsatellite molecular markers. Hydrobiologia 583: 321-330.
3. Beerli, P. 2006. Comparison of Bayesian and maximum-likelihood inference of population genetic parameters. Bioinformatics (Oxford, England) 22: 341-345.
4. Beerli, P., and J. Felsenstein. 1999. Maximum-likelihood estimation of migration rates and effective population numbers in two populations using a coalescent approach. Genetics 152: 763-773.
5. Beerli, P., and J. Felsenstein. 2001. Maximum likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach. Proceedings of the National Academy of Sciences, USA 98: 4563-4568.
6. Behling, H. 2001. Late quaternary environmental changes in the Lagoa da Curuça region (eastern Amazonia, Brazil) and evidence of Podocarpus in the Amazon lowland. Vegetation History and Archaeobotany 10: 175-183.
7. Behling, H., and M. L. da Costa. 1997. Studies on Holocene tropical vegetation, mangrove and coast environments in the state of Maranhão, NE Brazil. Quaternary of South America and Antarctic Peninsula 10: 93-118.
8. Behling, H., and M. L. da Costa. 2001. Holocene vegetational and environmental changes from the Lago Crispin record in northeastern ParáState, eastern Amazonia. Review of Palaeobotany and Palynology 114: 145-155.
9. Bonferroni, C. E. 1936. Teoria statistica delle classi e calcolo delle probabilità. Pubblicazioni del Istituto Superiore di Scienze Economiche e Commerciali di Firenze 8: 3-62.
10. Cain, M. L., B. G. Milligan, and A. E. Strand. 2000. Long-distance seed dispersal in plant population. American Journal of Botany 87: 1217-1227.
11. Cerón-Souza, I., E. Rivera-Ocasio, E. Medina, J. A. Jiménez, W. O. McMillan, and E. Bermingham. 2010. Hybridization and introgression in New World red mangroves, Rhizophora (Rhizophoraceae). American Journal of Botany 97: 945-957.
12. Domínguez, C. A., L. E. Eguiarte, J. Núñez-Farfán, and R. Dirzo. 1998. Flower morphometry of Rhizophora mangle (Rhizophoraceae): Geographical variation in Mexican populations. American Journal of Botany 85: 637-643.
13. Duke, N. C., M. C. Ball, and J. C. Ellison. 1998. Factors influencing biodiversity and distributional gradients in mangroves. Global Ecology and Biogeography Letters 7: 27-47.
14. Ellison, J. 1991. The Pacific palaeogeography of Rhizophora mangle L. (Rhizophoraceae). Botanical Journal of the Linnean Society 105: 271-284.
15. Excoffier, L., G. Laval, and S. Schneider. 2005. Arlequin ver. 3.0: An integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online 1: 47-50.
16. Excoffier, L., and M. Slatkin. 1998. Incorporating genotypes of relatives into a test of linkage disequilibrium. American Journal of Human Genetics 62: 171-180.
17. Frankham, R., J. D. Ballou, and D. A. Briscoe. 2004. A primer of conservation genetics. Cambridge University Press, Cambridge, UK.
18. Ge, X., and M. Sun. 1999. Reproductive biology and genetic diversity of a cryptoviviparous mangrove Aegiceras corniculatum (Myrsinaceae) using allozyme and intersimple sequence repeat (ISSR) analysis. Molecular Ecology 8: 2061-2069.
19. Goudet, J. 2001. FSTAT, a program to estimate and test gene diversities and fixation indices, version 2.9.3. Computer program and documentation distributed by the author, website http://www.unil.ch/izea/ softwares/fstat.html [accessed 01 August 2010].
20. Goudet, J., M. Raymond, T. de Meeüs, and F. Rousset. 1996. Testing differentiation in diploid populations. Genetics 144: 1933-1940.
21. Hastings, A., and S. Harrison. 1994. Metapopulation dynamics and genetics. Annual Review of Ecology and Systematics 25: 167-188.
22. Hewitt, G. 1996. Some genetic consequences of ice ages, and their role in divergence and speciation. Biological Journal of the Linnean Society. Linnean Society of London 58: 247-276.
23. Hewitt, G. 2000. The genetic legacy of the Quaternary ice ages. Nature 405: 907-913.
24. Hewitt, G. 2004. Genetic consequences of climatic oscillations in the Quaternary. Philosophical Transactions of the Royal Society, B. Biological Sciences 359: 183-195.
25. Jian, S., J. Ban, H. Ren, and H. Yan. 2010. Low genetic variation detected within the widespread mangrove species Nypa fruticans (Palmae) from Southeast Asia. Aquatic Botany 92: 23-27.
26. Klekowski, E. J. Jr., R. Lowenfeld, and P. K. Helper. 1994. Mangrove genetics. II. Outcrossing and lower spontaneous mutation rates in Puerto Rican Rhizophora. International Journal of Plant Sciences 155: 373-381.
27. Lakshmi, M., S. Rajalakshmi, M. Parani, C. S. Anuratha, and A. K. Parida. 1997. Molecular phylogeny of mangroves I. Use of molecular markers in assessing the intraspecific genetic variability in the mangrove species Acanthus ilicifolius Linn. (Acanthaceae). Theoretical and Applied Genetics 94: 1121-1127.
28. Lowenfeld, R., and E. J. Klekowski. 1992. Mangrove genetics. I. Mating system and mutation rates of Rhizophora mangle in Florida and San Salvador Island, Bahamas. International Journal of Plant Sciences 153: 394-399.
29. Lumpkin, R., and Z. Garraffo. 2005. Evaluating the decomposition of tropical Atlantic drifter observations. Journal of Atmospheric and Oceanic Technology I 22: 1403-1415.
30. Lumpkin, R., and M. Pazos. 2006. Measuring surface currents with surface velocity program drifters: The instrument, its data, and some recent results. In A. Griffa, A. D. Kirwan, A. J. Mariano, T. Ozgokmen, and T. Rossby [eds.], Lagrangian analysis and prediction of coastal and ocean dynamics (LAPCOD). Cambridge University Press, Cambridge, UK.
31. Maia, L. P., L. D. Lacerda, L. H. U. Monteiro, and G. M. E. Souza. 2006. Atlas dos Manguezais do Nordeste: Avaliaçã o dasÁreas de Manguezal dos Estados do Piauí, Ceará, Rio Grande do Norte, Paraíba e Pernambuco. Superintendência Estadual do Meio Ambiente, Fortaleza, Brazil.
32. Mantel, N. 1967. The detection of disease clustering and a generalized regression approach. Cancer Research 27: 209-220.
33. Menezes, M. P. M., U. Berger, and U. Mehlig. 2008. Mangrove vegetation in Amazonia: A review of studies from the coast of Paráand Maranhão States, north Brazil. Acta Amazonica 38: 403-420.
34. Menezes, M. P. M., D. Oliveira, and C. F. Melo. 1997. Pollination of red mangrove, Rhizophora mangle, in northern Brazil. Acta Horticulturae 437: 431-434.
35. Muss, A., R. D. Ross, C. A. Stepien, P. Wirtz, and B. W. Bowen. 2001. Phylogeography of Ophioblennius: The role of ocean currents and geography in reef fish evolution. Evolution; International Journal of Organic Evolution 55: 561-572.
36. Nei, M. 1972. Genetic distance between populations. American Naturalist 106: 283-292.
37. Nettel, A., and R. Dodd. 2007. Drifting propagules and receding swamps: Genetic footprints of mangrove recolonization and dispersal along tropical coasts. Evolution; International Journal of Organic Evolution 61: 958-971.
38. NOAA. 2010. National Oceanic and Atmospheric Administration. Website http://www.aoml.noaa.gov/phod/graphics/dacdata/seasonal_ brazil.gif [accessed 01 August 2010].
39. Núñez-Farfán, J., C. A. Domínguez, L. E. Eguiarte, A. Cornejo, M. Quijano, J. Vargas, and R. Dirzo. 2002. Genetic divergence among Mexican populations of red mangrove (Rhizophora mangle): Geographic and historic effects. Evolutionary Ecology Research 4: 1049-1064.
40. Palumbi, S. R. 2003. Population genetics, demographic connectivity, and the design of marine reserves. Ecological Applications 13: 146-158.
41. Petit, R. J., I. Aguinagalde, J. de Beaulieu, C. Bittkau, S. Brewer, R. Cheddadi, R. Ennos, et al. 2003. Glacial refugia: Hotspots but not melting pots of genetic diversity. Science 300: 1563-1565.
42. Rabinowitz, D. 1978. Dispersal properties of mangrove propagules. Biotropica 10: 47-57.
43. Rosero-Galindo, C., E. Gaitan-Solis, H. Cárdenas-Henao, J. Tohme, and N. Toro-Perea. 2002. Polymorphic microsatellites in a mangrove species, Rhizophora mangle (L.) (Rhizophoraceae). Molecular Ecology Notes 2: 281-283.
44. Saenger, P. 1998. Mangrove vegetation: An evolutionary perspective. Marine & Freshwater Research 49: 277-286.
45. Saitou, N., and M. Nei. 1987. The neighbor-joining method: A new method for reconstructing phylogenetic tree. Molecular Biology and Evolution 4: 406-425.
46. Santos, S., H. Schneider, and I. Sampaio. 2003. Genetic differentiation of Macrodon ancylodon (Sciaenidae, Perciformes) populations in Atlantic coastal waters of South America as revealed by mtDNA analysis. Genetics and Molecular Biology 26: 151-161.
47. Schaeffer-Novelli, Y., G. Cintrón-Molero, and R. R. Adaime. 1990. Variability of mangrove ecosystems along the Brazilian coast. Estuaries 13: 204-218.
48. Slatkin, M. 1995. A measure of population subdivision based on microsatellite allele frequencies. Genetics 139: 457-462.
49. Slatkin, M., and L. Excoffier. 1996. Testing for linkage disequilibrium in genotypic data using the EM algorithm. Heredity 76: 377-383.
50. Stramma, L., and M. England. 1999. On the water masses and mean circulation of the South Atlantic Ocean. Journal of Geophysical Research 104: 20863-20883.
51. Sun, M., K. C. Wong, and J. S. Y. Lee. 1998. Reproductive biology and population genetic structure of Kandelia candel (Rhizophoraceae), a viviparous mangrove species. American Journal of Botany 85: 1631-1637.
52. Takayama, K., M. Tamura, Y. Tateishi, and T. Kajita. 2008a. Isolation and characterization of microsatellite loci in the red mangrove Rhizophora mangle (Rhizophoraceae) and its related species. Conservation Genetics 9: 1323-1325.
53. Takayama, K., Y. Tateishi, J. Murata, and T. Kajita. 2008b. Gene flow and population subdivision in a pantropical plant with sea-drifted seeds Hibiscus tiliaceus and its allied species: Evidence from microsatellite analyses. Molecular Ecology 17: 2730-2742.
54. Takezaki, N. 2001. POPTREE. Max-Planck Institut fuer Biologie, Alemanha. Computer program and documentation distributed by the author, website: http://www.bio.psu.edu/People/Faculty/Nei/Lab/ software.htm [accessed 01 August 2010].
55. Tomlinson, P. B. 1986. The botany of mangroves. Cambridge University Press, Cambridge, UK.
56. Vedel, V., H. Behling, M. Cohen, and R. Lara. 2006. Holocene mangrove dynamics and sea-level changes in northern Brazil, inferences from the Taperebal core in northeastern ParáState. Vegetation History and Archaeobotany 15: 115-123.
57. Woodroffe, C. D., and J. Grindrod. 1991. Mangrove biogeography: the role of Quaternary environmental and sea-level change. Journal of Biogeography 18: 479-492.
58. Yeh, F. C., R. C. Yang, T. Boyle, Z. H. Ye, and J. X. Mao. 1997. POPGENE, the user-friendly shareware for population genetic analy sis, Molecular Biology and Biotechnology Centre, Alberta. Website http://www.ualberta.ca/~fyeh [accessed 01 August 2010].
59. Yokoyama, Y., P. De Deckker, K. Lambeck, P. Johnston, and L. K. Fifeld. 2001. Sea level at the Last Glacial Maximum: Evidence from northwestern Australia to constrain ice volumes for oxygen isotope stage 2. Palaeogeography, Palaeoclimatology, Palaeoecology 165: 281-297.