Fluorescence instrument for in situ monitoring of viral abundance in water, wastewater and recycled water

Journal of Virological Methods

Volumn 181, Issue 1, 2012, Pages 97-102

  Pollard, Peter C ^a  

^a GRIFFITH UNIVERSITY   (Australia)

Author keywords

Fluorescence excitation emission matrices; Recycled water; SYBR Gold; Viral abundance; Wastewater

Indexed keywords

DEOXYRIBONUCLEASE II; DYE; FRESH WATER; NUCLEOTIDE; ORGANIC CARBON; RECYCLED WATER; SEA WATER; SYBR GOLD; UNCLASSIFIED DRUG; VIRUS DNA; VIRUS RNA; WATER;

ARTICLE; AUTOFLUORESCENCE; CONTROLLED STUDY; DNA PROBE; ENVIRONMENTAL MONITORING; FILTRATION; FLUORESCENCE ANALYSIS; FLUORESCENCE MICROSCOPY; MICROBIOLOGICAL PARAMETERS; NONHUMAN; ONLINE MONITORING; PRIORITY JOURNAL; RNA PROBE; SENSITIVITY ANALYSIS; TROPICS; VIRUS COUNT; VIRUS IDENTIFICATION; WASTE WATER; WATER POLLUTION INDICATOR; WATER SAMPLING; WATER TREATMENT;

FILTRATION; FLUORESCENCE; FLUOROMETRY; HUMANS; MICROSCOPY, FLUORESCENCE; ORGANIC CHEMICALS; STAINING AND LABELING; VIRAL LOAD; VIRUSES; WATER MICROBIOLOGY;

EID: 84858155421     PISSN: 01660934     EISSN: 18790984     Source Type: Journal    
DOI: 10.1016/j.jviromet.2012.01.021     Document Type: Article

References (26)

1. Standard methods for the examination of water and wastewater 1998, American Public Health Association, American Public Health Association, Washington, DC. 20th ed.
2. Baker A. Fluorescence excitation-emission matrix characterization of some sewage-impacted rivers. Environ. Sci. Technol. 2001, 35:948-953.
3. Baker A. Spectrophotometric discrimination of river dissolved organic matter. Hydrol. Process. 2002, 16:3203-3213.
4. Baker A., Tipping E., Thacker S.A., Gondar D. Relating dissolved organic matter fluorescence and functional properties. Chemosphere 2008, 73:1765-1772.
5. Brussaard C.P.D., Marie D., Bratbak G. Flow cytometric detection of viruses. J. Virol. Methods 2000, 85:175-182.
6. Coble P.G. Characterization of marine and terrestrial DOM in seawater using excitation emission matrix spectroscopy. Mar. Chem. 1996, 51:325-346.
7. Danovaro R., Corinaldesi C., Dell'Anno A., Fuhrman J.A., Middelburg J.J., Noble R.T., Suttle C. Marine viruses and climate change. FEMS Microbiol. Rev. 2010, 2011:1-42.
8. Fry E.E., Stuart D.I. The Picornaviruses 2010, 60-71. ASM Press, Washington, DC. E. Ehrenfeld, E. Domingo, R.P. Roos (Eds.).
9. Griffin D.W., Donaldson K.A., Paul J.H., Rose J.B. Pathogenic human viruses in coastal waters. Clin. Microbiol. Rev. 2003, 16:129-143.
10. Henderson R.K., Baker A., Murphy K.R., Hamblya A., Stuetz R.M., Khan S.J. Fluorescence as a potential monitoring tool for recycled water systems. A review. Water Res. 2009, 43:863-881.
11. Hobbie J.E., Daley R.J., Jasper S. Use of nuclepore filters for counting bacteria by fluorescence microscopy. Appl. Environ. Microbiol. 1977, 33:1225-1228.
12. Marie D., Brussaard C.P.D., Thyrhaug R., Bratbak G., Vaulot D. Enumeration of marine viruses in culture and natural samples by flow cytometry. Appl. Environ. Microbiol. 1999, 65:45-52.
13. Noble R.T., Fuhrman J.A. Use of SYBR Green I for rapid epifluorescence counts of marine viruses and bacteria. Aquat. Microb. Ecol. 1998, 14:113-118.
14. Patel A., Noble R.T., Steele J.A., Schwalbach M.S., Hewson I., Fuhrman J.A. Virus and prokaryote enumeration from planktonic aquatic environments by epifluorescence microscopy with SYBR Green I. Nat. Protoc. 2007, 2:269-276.
15. Paul J.H., Jiang S.C., Rose J.B. Concentration of viruses and dissolved DNA from aquatic environments by vortex flow filtration. Appl. Environ. Microbiol. 1991, 57:2197-2204.
16. Pollard P.C., Ducklow H. Ultrahigh bacterial production in a eutrophic subtropical Australian river: does viral lysis short-circuit the microbial loop?. Limnol. Oceanogr. 2011, 56:1115-1129.
17. Pollard P.C., Greenfield P.F. Measuring in situ bacterial specific growth rates and population dynamics in wastewater. Water Res. 1997, 31:1074-1082.
18. Rohwer F., Thurber R.V. Viruses manipulate the marine environment. Nature 2009, 459:207-212.
19. Seymour J.R., Patten N., Bourne D.G., Mitchell G. Spatial dynamics of virus-like particles and heterotrophic bacteria within a shallow coral reef system. Mar. Ecol-Prog. Ser. 2005, 288:1-8.
20. Suttle C. Viruses in the sea. Nature 2005, 437:356-361.
21. Vives-Rego J., Lebaron P., Nebe-von Caron G. Current and future applications of flow cytometry in aquatic microbiology. FEMS Microbiol. Rev. 2000, 24:429-448.
22. Von Munch E., Pollard P.C. Measuring bacterial biomass-COD in wastewater containing particulate matter. Water Res. 1997, 31:2550-2556.
23. Wegley L., Mosier-Boss P., Lieberman S., Andrews J., Graff-Baker A., Rohwer F. Rapid estimation of microbial numbers in water using bulk fluorescence. Environ. Microbiol. 2006, 8:1775-1782.
24. Weinbauer M.G. Ecology of prokaryotic viruses. FEMS Microbiol. Rev. 2004, 28:27-181.
25. Wen K., Ortmann A.C., Suttle C.A. Accurate Estimation of Viral Abundance by Epifluorescence Microscopy. Appl Environ Microbiol 2004, 70:3862-3867.
26. Wommack K.E., Colewell R.R. Virioplankton: viruses in aquatic ecosystems. Microbiol. Mol. Biol. Rev. 2000, 64:69-114.