-
1
-
-
43049174572
-
Tomato ( Solanum lycopersicum ) health components: From the seed to the consumer
-
Dorais, M., Ehret, D. L., and Papadopoulos, A. P. (2008) Tomato ( Solanum lycopersicum ) health components: from the seed to the consumer. Phytochem Rev 7, 231-250.
-
(2008)
Phytochem Rev
, vol.7
, pp. 231-250
-
-
Dorais, M.1
Ehret, D.L.2
Papadopoulos, A.P.3
-
2
-
-
27244454556
-
The SOL Genomics Network. A comparative resource for Solanaceae biology and beyond
-
DOI 10.1104/pp.105.060707
-
Mueller, L. A., Solow, T. H., Taylor, N., Skwarecki, B., Buels, R., Binns, J., Lin, C., Wright, M. H., Ahrens, R., Wang, Y., Herbst, E. V., Keyder, E. R., Menda, N., Zamir, D., and Tanksley, S. D. (2005) The SOL Genomics Network: a comparative resource for Solanaceae biology and beyond. Plant Physiol 138, 1310-1317. http://www.sgn.cornell.edu/about/tomato-sequencing.pl. (Pubitemid 43142079)
-
(2005)
Plant Physiology
, vol.138
, Issue.3
, pp. 1310-1317
-
-
Mueller, L.A.1
Solow, T.H.2
Taylor, N.3
Skwarecki, B.4
Buels, R.5
Binns, J.6
Lin, C.7
Wright, M.H.8
Ahrens, R.9
Wang, Y.10
Herbst, E.V.11
Keyder, E.R.12
Menda, N.13
Zamir, D.14
Tanksley, S.D.15
-
3
-
-
29244477997
-
Natural antioxidants from tomato extract reduce blood pressure in patients with grade-1 hypertension: A double-blind, placebocontrolled pilot study
-
e1-100.e6
-
Engelhard, Y. N., Gazer, B., and Paran, E. (2006) Natural antioxidants from tomato extract reduce blood pressure in patients with grade-1 hypertension: a double-blind, placebocontrolled pilot study. Am Heart J 151, 100. e1-100.e6.
-
(2006)
Am Heart J
, vol.151
, pp. 100
-
-
Engelhard, Y.N.1
Gazer, B.2
Paran, E.3
-
4
-
-
44349092469
-
Metabolite annotations based on the integration of mass spectral information
-
DOI 10.1111/j.1365-313X.2008.03434.x
-
Iijima, Y., Nakamura, Y., Ogata, Y., Tanaka, K., Sakurai, N., Suda, K., Suzuki, T., Suzuki, H., Okazaki, K., Kitayama, M., Kanaya, S., Aoki, K., and Shibata, D. (2008) Metabolite annotations based on the integration of mass spectral information. Plant J 54, 949-962. (Pubitemid 351744774)
-
(2008)
Plant Journal
, vol.54
, Issue.5
, pp. 949-962
-
-
Iijima, Y.1
Nakamura, Y.2
Ogata, Y.3
Tanaka, K.4
Sakurai, N.5
Suda, K.6
Suzuki, T.7
Suzuki, H.8
Okazaki, K.9
Kitayama, M.10
Kanaya, S.11
Aoki, K.12
Shibata, D.13
-
5
-
-
33747137944
-
A liquid chromatography-mass spectrometry-based metabolome database for tomato
-
DOI 10.1104/pp.106.078428
-
Moco, S., Bino, R. J., Vorst, O., Verhoeven, H. A., de Groot, J., van Beek, T. A., Vervoort, J., and de Vos, C. H. (2006) A liquid chromatography mass spectrometry based Metabolome database for tomato. Plant Physiol 141, 1205-1218. (Pubitemid 44223273)
-
(2006)
Plant Physiology
, vol.141
, Issue.4
, pp. 1205-1218
-
-
Moco, S.1
Bino, R.J.2
Vorst, O.3
Verhoeven, H.A.4
De Groot, J.5
Van Beek, T.A.6
Vervoort, J.7
Ric De Vos, C.H.8
-
6
-
-
48549105883
-
Gene expression and metabolism in tomato fruit surface tissues
-
DOI 10.1104/pp.108.116004
-
Mintz-Oron, S., Mandel, T., Rogachev, I., Feldberg, L., Lotan, O., Yativ, M., Wang, Z., Jetter, R., Venger, I., Adato, A., and Aharoni, A. (2008). Gene expression and metabolism in tomato fruit surface tissues. Plant Physiol 147, 823-851. (Pubitemid 352844330)
-
(2008)
Plant Physiology
, vol.147
, Issue.2
, pp. 823-851
-
-
Mintz-Oron, S.1
Mandel, T.2
Rogachev, I.3
Feldberg, L.4
Lotan, O.5
Yativ, M.6
Wang, Z.7
Jetter, R.8
Venger, I.9
Adato, A.10
Aharoni, A.11
-
7
-
-
1342308553
-
Profiling of arabidopsis secondary metabolites by capillary liquid chromatography coupled to electrospray ionization quadrupole time-of-flight mass spectrometry
-
DOI 10.1104/pp.103.032714
-
von Roepenack-Lahaye, E., Degenkolb, T., Zerjeski, M., Franz, M., Roth, U., Wessjohann, L., Schmidt, J., Schee, D., and Clemens, S. (2004) Profi ling of Arabidopsis secondary metabolites by capillary liquid chromatography coupled to electrospray ionization quadrupole time-of-fl ight mass spectrometry. Plant Physiol 134, 548-559. (Pubitemid 38261529)
-
(2004)
Plant Physiology
, vol.134
, Issue.2
, pp. 548-559
-
-
Von Roepenack-Lahaye, E.1
Degenkolb, T.2
Zerjeski, M.3
Franz, M.4
Roth, U.5
Wessjohann, L.6
Schmidt, J.7
Scheel, D.8
Clemens, S.9
-
8
-
-
34948814692
-
Metabolomics technologies and metabolite identification
-
DOI 10.1016/j.trac.2007.08.003, PII S0165993607001689
-
Moco, S., Bino, R., De Vos, R. C. H., and Vervoort, J. (2007) Metabolomics technologies and metabolite identifi cation. Trends in Analytical Chemistry 26, 855-866. (Pubitemid 47532208)
-
(2007)
TrAC - Trends in Analytical Chemistry
, vol.26
, Issue.9
, pp. 855-866
-
-
Moco, S.1
Vervoort, J.2
Moco, S.3
Bino, R.J.4
De Vos, R.C.H.5
Bino, R.6
-
9
-
-
17444404226
-
High resolution "ultra performance" liquid chromatography coupled to oa-TOF mass spectrometry as a tool for differential metabolic pathway profiling in functional genomic studies
-
DOI 10.1021/pr049769r
-
Wilson, I., Nicholson, J., Castro-Perez, J., Granger, J., Johnson, K., Smith, B., and Plumb, R. (2005) High resolution ultra performance liquid chromatography coupled to oa-TOF mass spectrometry as a tool for differential metabolic pathway profi ling in functional genomic studies. J Proteome Res 4, 591-598. (Pubitemid 40548168)
-
(2005)
Journal of Proteome Research
, vol.4
, Issue.2
, pp. 591-598
-
-
Wilson, I.D.1
Nicholson, J.K.2
Castro-Perez, J.3
Granger, J.H.4
Johnson, K.A.5
Smith, B.W.6
Plumb, R.S.7
-
10
-
-
84987700180
-
Plant metabolomics strategies based upon quadrupole time of fl ight mass spectrometry (QTOF-MS)
-
(Saito, K., Dixon, R. A. and Willmitzer, L., eds.) Springer-Verlag, Berlin, Heidelberg
-
Verhoeven, H. A., de Vos, C. H., Bino, R. J., and Hall, R. D. (2006). Plant metabolomics strategies based upon quadrupole time of fl ight mass spectrometry (QTOF-MS), in Plant Metabolomics-Biotechnology in Agriculture and Forestry (Saito, K., Dixon, R. A. and Willmitzer, L., eds.) Springer-Verlag, Berlin, Heidelberg Vol. 57 pp. 33-48.
-
(2006)
Plant Metabolomics-Biotechnology in Agriculture and Forestry
, vol.57
, pp. 33-48
-
-
Verhoeven, H.A.1
De Vos, C.H.2
Bino, R.J.3
Hall, R.D.4
-
12
-
-
57749121318
-
Reconfiguration of the achene and receptacle metabolic networks during strawberry fruit development
-
DOI 10.1104/pp.108.120691
-
Fait, A., Hanhineva, K., Belleggia, R., Dai, N., Rogachev, I., Fernie, A. R., and Aharoni, A. (2008) Reconfi guration of the achene and receptacle metabolic networks during strawberry fruit development. Plant Physiol 148, 730-750. (Pubitemid 352847532)
-
(2008)
Plant Physiology
, vol.148
, Issue.2
, pp. 730-750
-
-
Fait, A.1
Hanhineva, K.2
Beleggia, R.3
Dai, N.4
Rogachev, I.5
Nikiforova, V.J.6
Fernie, A.R.7
Aharoni, A.8
-
13
-
-
53649087094
-
Non-targeted analysis of spatial metabolite composition in strawberry (Fragaria × ananassa) fl owers
-
Hanhineva, K., Rogachev, I., Kokko, H., Mintz-Oron S., Venger, I., Kärenlampi, S., and Aharoni, A. (2008) Non-targeted analysis of spatial metabolite composition in strawberry (Fragaria × ananassa) fl owers. Phytochemistry, 69, 2463-2481.
-
(2008)
Phytochemistry
, vol.69
, pp. 2463-2481
-
-
Hanhineva, K.1
Rogachev, I.2
Kokko, H.3
Mintz-Oron, S.4
Venger, I.5
Kärenlampi, S.6
Aharoni, A.7
-
14
-
-
32444446805
-
XCMS: Processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification
-
DOI 10.1021/ac051437y
-
Smith, C.A., Want, E.J., O'Maille, G., Abagyan, R. and Siuzdak, G. (2006) XCMS: processing mass spectrometry data for metabolite profi ling using nonlinear peak alignment, matching, and identifi cation. Anal Chem 78, 779-787. (Pubitemid 43228585)
-
(2006)
Analytical Chemistry
, vol.78
, Issue.3
, pp. 779-787
-
-
Smith, C.A.1
Want, E.J.2
O'Maille, G.3
Abagyan, R.4
Siuzdak, G.5
-
15
-
-
84896413182
-
Capillary HPLC coupled to electrospray ionization quadrupole time-of-fl ight mass spectrometry
-
Saito, K., Dixon, R. A. and Willmitzer, L., eds.) Springer-Verlag, Berlin, Heidelberg
-
Clemens, S., Böttcher, C., Franz, M., Willscher, E., Roeoenack-Lahaye, E. V., and Scheel, D. (2006) Capillary HPLC coupled to electrospray ionization quadrupole time-of-fl ight mass spectrometry. In Plant Metabolomics-Biotechnology in Agriculture and Forestry (Saito, K., Dixon, R. A. and Willmitzer, L., eds.) Springer-Verlag, Berlin, Heidelberg Vol. 57, pp. 65-79.
-
(2006)
Plant Metabolomics-Biotechnology in Agriculture and Forestry
, vol.57
, pp. 65-79
-
-
Clemens, S.1
Böttcher, C.2
Franz, M.3
Willscher, E.4
Roeoenack-Lahaye, E.V.5
Scheel, D.6
-
16
-
-
34248512719
-
Untargeted large-scale plant metabolomics using liquid chromatography coupled to mass spectrometry
-
DOI 10.1038/nprot.2007.95, PII NPROT.2007.95
-
De Vos, R. C. H., Moco, S., Lommen, A., Keurentjes, J. J. B., Bino, R. J., and Hall, R. D. (2007) Untargeted large-scale plant metabolomics using liquid chromatography coupled to mass spectrometry. Nature protocols 2, 778-791. (Pubitemid 46745574)
-
(2007)
Nature Protocols
, vol.2
, Issue.4
, pp. 778-791
-
-
De Vos, R.C.H.1
Moco, S.2
Lommen, A.3
Keurentjes, J.J.B.4
Bino, R.J.5
Hall, R.D.6
-
17
-
-
33749074122
-
A pragmatic and readily implemented quality control strategy for HPLC-MS and GC-MS-based metabonomic analysis
-
DOI 10.1039/b604498k
-
Sangster, T., Major, H., Plumb, R., Wilson, A. J., and Wilson, I. D. (2006) A pragmatic and readily implemented quality control strategy for HPLC-MS and GC-MS-based metabonomic analysis. Analyst 131(10), 1075-1078. (Pubitemid 44465534)
-
(2006)
Analyst
, vol.131
, Issue.10
, pp. 1075-1078
-
-
Sangster, T.1
Major, H.2
Plumb, R.3
Wilson, A.J.4
Wilson, I.D.5
-
18
-
-
12944267048
-
Identifi cation of the SAAT Gene Involved in Strawberry Flavor Biogenesis by Use of DNA Microarrays
-
Aharoni, A., Keizer, L. C. P., Bouwmeester, H. J., Sun, Z., Huerta, M. A., Verhoeven, H. A., Blaas, J., van Houwelingen, A. M. M. L., De Vos, R. C. H., van der Voet, H., Jansen, R. C., Guis, M., Mol, J., Davis, R. W., Schena, M., van Tunen, A. J., and O'Connell, A. P. (2000) Identifi cation of the SAAT Gene Involved in Strawberry Flavor Biogenesis by Use of DNA Microarrays. The Plant Cell 12, 647-662.
-
(2000)
The Plant Cell
, vol.12
, pp. 647-662
-
-
Aharoni, A.1
Keizer, L.C.P.2
Bouwmeester, H.J.3
Sun, Z.4
Huerta, M.A.5
Verhoeven, H.A.6
Blaas, J.7
Van Houwelingen, A.M.M.L.8
De Vos, R.C.H.9
Van Der Voet, H.10
Jansen, R.C.11
Guis, M.12
Mol, J.13
Davis, R.W.14
Schena, M.15
Van Tunen, A.J.16
O'connell, A.P.17
-
19
-
-
25444526868
-
Processing methods for differential analysis of LC/MS profi le data
-
Katajamaa, M., and Oresic, M. (2005) Processing methods for differential analysis of LC/MS profi le data. BMC Bioinformatics 6, 179.1-179.12.
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 1791-17912
-
-
Katajamaa, M.1
Oresic, M.2
-
20
-
-
65249132985
-
MetAlign: An interfacedriven, versatile metabolomics tool for hyphenated full-scan MS data pre-processing
-
Lommen, A. (2009) MetAlign: an interfacedriven, versatile metabolomics tool for hyphenated full-scan MS data pre-processing. Anal Chem 81, 3079-3086. http://www.metalign.nl.
-
(2009)
Anal Chem
, vol.81
, pp. 3079-3086
-
-
Lommen, A.1
-
21
-
-
57749103865
-
The transcript and metabolite networks affected by the two clades of Arabidopsis glucosinolate biosynthesis regulators
-
DOI 10.1104/pp.108.124784
-
Malitsky, S., Blum, E., Less, H., Venger, I., Elbaz, M., Morin, S., Eshed, Y., and Aharoni, A. (2008) The inner and outer circles of the transcriptome and metabolome effected by the two clades of Arabidopsis glucosinolate biosynthesis regulators. Plant Physiol 148, 2021-2049. (Pubitemid 352847479)
-
(2008)
Plant Physiology
, vol.148
, Issue.4
, pp. 2021-2049
-
-
Malitsky, S.1
Blum, E.2
Less, H.3
Venger, I.4
Elbaz, M.5
Morin, S.6
Eshed, Y.7
Aharoni, A.8
-
22
-
-
84983633298
-
KNApSAcK: A comprehensive species-metabolite relationship database
-
(Saito, K., Dixon, R. A. and Willmitzer, L., eds.) Springer-Verlag, Berlin, Heidelberg
-
Shinbo, Y., Nakamura, Y., Altaf-Ul-Amin, M., Asahi, H., Kurokawa, K., Arita, M., Saito, K., Ohta, D., Shibata, D., and Kanaya, S. (2006) KNApSAcK: A comprehensive species-metabolite relationship database, in: Plant Metabolomics-Biotechnology in Agriculture and Forestry (Saito, K., Dixon, R. A. and Willmitzer, L., eds.) Springer-Verlag, Berlin, Heidelberg Vol. 57, pp. 165-181.
-
(2006)
Plant Metabolomics-Biotechnology in Agriculture and Forestry
, vol.57
, pp. 165-181
-
-
Shinbo, Y.1
Nakamura, Y.2
Altaf-Ul-Amin, M.3
Asahi, H.4
Kurokawa, K.5
Arita, M.6
Saito, K.7
Ohta, D.8
Shibata, D.9
Kanaya, S.10
-
23
-
-
53249144283
-
PRIMe: A Web site that assembles tools for metabolomics and transcriptomics
-
Akiyama, K., Chikayama, E., Yuasa, H., Shimada, Y., Tohge, T., Shinozaki, K., Hira, M. Y., Sakurai, T., Kikuchi, J., and Saito K. (2008) PRIMe: a Web site that assembles tools for metabolomics and transcriptomics. In Silico Biol 8 (3-4), 339-345.
-
(2008)
Silico Biol
, vol.8
, Issue.3-4
, pp. 339-345
-
-
Akiyama, K.1
Chikayama, E.2
Yuasa, H.3
Shimada, Y.4
Tohge, T.5
Shinozaki, K.6
Hira, M.Y.7
Sakurai, T.8
Kikuchi, J.9
Saito, K.10
-
24
-
-
42449126160
-
The fl avonoids of tomatoes
-
Slimestad, R., Fossen, T., and Verheul, M. J. (2008) The fl avonoids of tomatoes. J Agric Food Chem 56, 2436-2441.
-
(2008)
J Agric Food Chem
, vol.56
, pp. 2436-2441
-
-
Slimestad, R.1
Fossen, T.2
Verheul, M.J.3
-
25
-
-
58949092636
-
Isolation, characterization, and surfactant properties of the major triterpenoid glycosides from unripe tomato fruits
-
Yamanaka, T., Vincken, J. P., de Waard, P., Sanders, M., Takada, N., and Gruppen, H. (2008) Isolation, characterization, and surfactant properties of the major triterpenoid glycosides from unripe tomato fruits. J Agric Food Chem 56, 11432-11440.
-
(2008)
J Agric Food Chem
, vol.56
, pp. 11432-11440
-
-
Yamanaka, T.1
Vincken, J.P.2
De Waard, P.3
Sanders, M.4
Takada, N.5
Gruppen, H.6
-
26
-
-
78449311334
-
Evaluation of peak picking quality in LC-MS metabolomics data
-
Brodsky, L., Moussaieff, A., Shahaf, N., Aharoni, A., and Rogachev, I. (2010) Evaluation of peak picking quality in LC-MS metabolomics data. Anal Chem 82, 9177-9187.
-
(2010)
Anal Chem
, vol.82
, pp. 9177-9187
-
-
Brodsky, L.1
Moussaieff, A.2
Shahaf, N.3
Aharoni, A.4
Rogachev, I.5
|