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Volumn 28, Issue 7, 2012, Pages 1017-1020

vHOG, a multispecies vertebrate ontology of homologous organs groups

Author keywords

[No Author keywords available]

Indexed keywords

SUIDAE; VERTEBRATA;

EID: 84858070795     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/bts048     Document Type: Article
Times cited : (17)

References (29)
  • 1
    • 44149103892 scopus 로고    scopus 로고
    • Anatomical ontologies for model organisms: the fungi and animals
    • Burger, A. et al. (eds) Springer, New York
    • Bard, J.B. (2008) Anatomical ontologies for model organisms: the fungi and animals. In Burger, A. et al. (eds) Anatomy Ontologies for Bioinformatics: Principles and Practice. Springer, New York, pp. 3-25.
    • (2008) Anatomy Ontologies for Bioinformatics: Principles and Practice , pp. 3-25
    • Bard, J.B.1
  • 2
    • 58149187893 scopus 로고    scopus 로고
    • The GOA database in 2009 Äîan integrated Gene Ontology annotation resource
    • Barrell, D. et al. (2009) The GOA database in 2009, Äîan integrated Gene Ontology annotation resource. Nucleic Acids Res., 37, D396-D403.
    • (2009) Nucleic Acids Res , vol.37
    • Barrell, D.1
  • 3
    • 48249136251 scopus 로고    scopus 로고
    • Bgee: integrating and comparing heterogeneous transcriptome data among species
    • Springer, New York
    • Bastian, F. et al. (2008) Bgee: integrating and comparing heterogeneous transcriptome data among species. In Data Integration in the Life Sciences. Springer, New York, pp. 124-131.
    • (2008) Data Integration in the Life Sciences , pp. 124-131
    • Bastian, F.1
  • 4
    • 58849131551 scopus 로고    scopus 로고
    • [Hoxa5: a master gene with multifaceted roles]
    • Boucherat, O. et al. (2009) [Hoxa5: a master gene with multifaceted roles]. Med. Sci., 25, 77-82.
    • (2009) Med. Sci. , vol.25 , pp. 77-82
    • Boucherat, O.1
  • 5
    • 78651364359 scopus 로고    scopus 로고
    • ZFIN: enhancements and updates to the Zebrafish Model Organism Database
    • Bradford, Y. et al. (2011) ZFIN: enhancements and updates to the Zebrafish Model Organism Database. Nucleic Acids Res., 39, D822-D829.
    • (2011) Nucleic Acids Res , vol.39
    • Bradford, Y.1
  • 6
    • 21444458209 scopus 로고    scopus 로고
    • Identification of transcriptional targets of HOXA5
    • Chen, H. et al. (2005) Identification of transcriptional targets of HOXA5. J. Biol. Chem., 280, 19373-19380.
    • (2005) J. Biol. Chem. , vol.280 , pp. 19373-19380
    • Chen, H.1
  • 7
    • 77953947298 scopus 로고    scopus 로고
    • Molecular signaling in zebrafish development and the vertebrate phylotypic period
    • Comte, A. et al. (2010) Molecular signaling in zebrafish development and the vertebrate phylotypic period. Evol. Dev., 12, 144-156.
    • (2010) Evol. Dev. , vol.12 , pp. 144-156
    • Comte, A.1
  • 8
    • 77953795230 scopus 로고    scopus 로고
    • The Teleost Anatomy Ontology: anatomical representation for the genomics age
    • Dahdul, W.M. et al. (2010) The Teleost Anatomy Ontology: anatomical representation for the genomics age. Syst. Biol., 59, 369-383.
    • (2010) Syst. Biol. , vol.59 , pp. 369-383
    • Dahdul, W.M.1
  • 9
    • 70350223635 scopus 로고    scopus 로고
    • Gonad morphogenesis in vertebrates: divergent means to a convergent end
    • DeFalco, T. and Capel, B. (2009) Gonad morphogenesis in vertebrates: divergent means to a convergent end. Ann. Rev. Cell Dev. Biol., 25, 457-482.
    • (2009) Ann. Rev. Cell Dev. Biol. , vol.25 , pp. 457-482
    • DeFalco, T.1    Capel, B.2
  • 10
    • 0032211965 scopus 로고    scopus 로고
    • Review: structure and function of the vomeronasal organ
    • Doving, K. and Trotier, D. (1998) Review: structure and function of the vomeronasal organ. J. Exp. Biol., 201, 2913-2925.
    • (1998) J. Exp. Biol. , vol.201 , pp. 2913-2925
    • Doving, K.1    Trotier, D.2
  • 11
    • 34548400851 scopus 로고    scopus 로고
    • Gray anatomy: phylogenetic patterns of somatic gonad structures and reproductive strategies across the Bilateria
    • Extavour, C.G.M. (2007) Gray anatomy: phylogenetic patterns of somatic gonad structures and reproductive strategies across the Bilateria. Integr. Comp. Biol., 47, 420-426.
    • (2007) Integr. Comp. Biol. , vol.47 , pp. 420-426
    • Extavour, C.G.M.1
  • 12
    • 75849158230 scopus 로고    scopus 로고
    • The Gene Ontology in 2010: Extensions and refinements
    • Gene Ontology Consortium
    • Gene Ontology Consortium (2010) The Gene Ontology in 2010: extensions and refinements. Nucleic Acids Res., 38, D331-D335.
    • (2010) Nucleic Acids Res , vol.38
  • 13
    • 44149103892 scopus 로고    scopus 로고
    • CARO -The common anatomy reference ontology
    • Burger, A. et al. (eds) Springer, New York
    • Haendel, M.A. et al. (2008) CARO -The common anatomy reference ontology. In Burger, A. et al. (eds) Anatomy Ontologies for Bioinformatics: Principles and Practice. Springer, New York, pp. 327-349.
    • (2008) Anatomy Ontologies for Bioinformatics: Principles and Practice , pp. 327-349
    • Haendel, M.A.1
  • 16
    • 80053194329 scopus 로고    scopus 로고
    • Evidence for short-time divergence and longtime conservation of tissue-specific expression after gene duplication
    • Huerta-Cepas, J. et al. (2011) Evidence for short-time divergence and longtime conservation of tissue-specific expression after gene duplication. Brief. Bioinformatics, 12, 442-448.
    • (2011) Brief. Bioinformatics , vol.12 , pp. 442-448
    • Huerta-Cepas, J.1
  • 17
    • 0004121797 scopus 로고    scopus 로고
    • Vertebrates: Comparative Anatomy, Function
    • McGraw-Hill, New York
    • Kardong, K. (2006) Vertebrates: Comparative Anatomy, Function, Evolution. McGraw-Hill, New York.
    • (2006) Evolution
    • Kardong, K.1
  • 18
    • 34250625734 scopus 로고    scopus 로고
    • Phenotype ontologies: the bridge between genomics and evolution
    • Mabee, P.M. et al. (2007) Phenotype ontologies: the bridge between genomics and evolution. Trends Ecol. Evol., 22, 345-350.
    • (2007) Trends Ecol. Evol. , vol.22 , pp. 345-350
    • Mabee, P.M.1
  • 19
    • 77950900465 scopus 로고    scopus 로고
    • Systematic discovery of nonobvious human disease models through orthologous phenotypes
    • McGary, K.L. et al. (2010) Systematic discovery of nonobvious human disease models through orthologous phenotypes. Proc. Natl Acad. Sci., 107, 6544-6549.
    • (2010) Proc. Natl Acad. Sci. , vol.107 , pp. 6544-6549
    • McGary, K.L.1
  • 20
    • 85013586322 scopus 로고    scopus 로고
    • Ontological realism: methodology or misdirection? Appl
    • Merrill, G.H. (2010) Ontological realism: methodology or misdirection? Appl. Ontol., 5, 79-108.
    • (2010) Ontol , vol.5 , pp. 79-108
    • Merrill, G.H.1
  • 21
    • 84856316836 scopus 로고    scopus 로고
    • Uberon, an integrative multi-species anatomy ontology
    • Mungall, C.J. et al. (2012) Uberon, an integrative multi-species anatomy ontology. Genome Biol., 31, R5.
    • (2012) Genome Biol , vol.31
    • Mungall, C.J.1
  • 22
    • 80051789305 scopus 로고    scopus 로고
    • Evolutionary origins of animal skeletal biomineralization
    • Murdock, D.J.E. and Donoghue, P.C.J. (2011) Evolutionary origins of animal skeletal biomineralization. Cells Tissues Organs, 194, 98-102.
    • (2011) Cells Tissues Organs , vol.194 , pp. 98-102
    • Murdock, D.J.E.1    Donoghue, P.C.J.2
  • 23
    • 67849128700 scopus 로고    scopus 로고
    • BioPortal: ontologies and integrated data resources at the click of a mouse
    • Noy, N.F. et al. (2009) BioPortal: ontologies and integrated data resources at the click of a mouse. Nucleic Acids Res., 37, W170-W173.
    • (2009) Nucleic Acids Res , vol.37
    • Noy, N.F.1
  • 24
    • 77954522638 scopus 로고    scopus 로고
    • Homolonto: generating homology relationships by pairwise alignment of ontologies and application to vertebrate anatomy
    • Parmentier, G. et al. (2010) Homolonto: generating homology relationships by pairwise alignment of ontologies and application to vertebrate anatomy. Bioinformatics, 26, 1766-1771.
    • (2010) Bioinformatics , vol.26 , pp. 1766-1771
    • Parmentier, G.1
  • 25
    • 76749157367 scopus 로고    scopus 로고
    • An ontology to clarify homology-related concepts
    • Roux, J. and Robinson-Rechavi, M. (2010) An ontology to clarify homology-related concepts. Trends Genet., 26, 99-102.
    • (2010) Trends Genet , vol.26 , pp. 99-102
    • Roux, J.1    Robinson-Rechavi, M.2
  • 26
    • 75549087533 scopus 로고    scopus 로고
    • PROSITE, a protein domain database for functional characterization and annotation
    • Sigrist, C.J. et al. (2010) PROSITE, a protein domain database for functional characterization and annotation. Nucleic Acids Res., 38, D161-D166.
    • (2010) Nucleic Acids Res , vol.38
    • Sigrist, C.J.1
  • 27
    • 85013575111 scopus 로고    scopus 로고
    • Ontological realism: a methodology for coordinated evolution of scientific ontologies
    • Smith, B. and Ceusters, W. (2010) Ontological realism: a methodology for coordinated evolution of scientific ontologies. Appl. Ontol., 5, 139-188.
    • (2010) Appl. Ontol. , vol.5 , pp. 139-188
    • Smith, B.1    Ceusters, W.2
  • 28
    • 35948989284 scopus 로고    scopus 로고
    • The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration
    • Smith, B. et al. (2007) The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration. Nat. Biotechnol., 25, 1251-1255.
    • (2007) Nat. Biotechnol. , vol.25 , pp. 1251-1255
    • Smith, B.1
  • 29
    • 0035134027 scopus 로고    scopus 로고
    • The existence of the vomeronasal organ in postnatal chimpanzees and evidence for its homology with that of humans
    • Smith, T.D. et al. (2001) The existence of the vomeronasal organ in postnatal chimpanzees and evidence for its homology with that of humans. J. Anat., 198, 77-82.
    • (2001) J. Anat. , vol.198 , pp. 77-82
    • Smith, T.D.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.