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Volumn , Issue , 2011, Pages 41-42

Distributed workflow-driven analysis of large-scale biological data using biokepler

Author keywords

Bioinformatics; Computational biology; Distributed execution patterns; Scientific workflow systems

Indexed keywords

BIOINFORMATICS APPLICATIONS; BIOLOGICAL DATA; COMPUTATIONAL BIOLOGY; DATA-INTENSIVE COMPUTING; DISTRIBUTED ENVIRONMENTS; DISTRIBUTED EXECUTION; DNA SEQUENCING; INVITED TALK; RAPID ANALYSIS; SCIENTIFIC WORKFLOWS; SEQUENCE DATA; UNPRECEDENTED DEMAND; WORK-FLOWS;

EID: 84857938329     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1145/2110205.2110215     Document Type: Conference Paper
Times cited : (9)

References (16)
  • 2
    • 43749095369 scopus 로고    scopus 로고
    • Data-intensive computing in the 21st century
    • Gorton, I., Greenfield, P., Szalay, A.S., and Williams, R., Data-intensive computing in the 21st Century. IEEE Computer, vol. 41, no. 4, pp. 30-32, 2008.
    • (2008) IEEE Computer , vol.41 , Issue.4 , pp. 30-32
    • Gorton, I.1    Greenfield, P.2    Szalay, A.S.3    Williams, R.4
  • 3
    • 65649120715 scopus 로고    scopus 로고
    • Cloudburst: Highly sensitive read mapping with MapReduce
    • April
    • Schatz, M., Cloudburst: Highly sensitive read mapping with MapReduce. Bioinformatics, vol. 25, no. 11, pp. 1363-1369, April 2009.
    • (2009) Bioinformatics , vol.25 , Issue.11 , pp. 1363-1369
    • Schatz, M.1
  • 4
    • 37549003336 scopus 로고    scopus 로고
    • MapReduce: Simplified data processing on large clusters
    • Dean, J. and Ghemawat, S., MapReduce: Simplified data processing on large clusters. Communications of the ACM, vol. 51, no. 1, pp. 107-113, 2008.
    • (2008) Communications of the ACM , vol.51 , Issue.1 , pp. 107-113
    • Dean, J.1    Ghemawat, S.2
  • 5
    • 41249096306 scopus 로고    scopus 로고
    • Using quality scores and longer reads improves accuracy of solexa read mapping
    • February
    • Smith, A.D., Xuan, Z., and Zhang, M. Q., Using quality scores and longer reads improves accuracy of Solexa read mapping. BMC Bioinformatics, vol. 9, no. 128, February 2008.
    • (2008) BMC Bioinformatics , vol.9 , Issue.128
    • Smith, A.D.1    Xuan, Z.2    Zhang, M.Q.3
  • 7
    • 35348839653 scopus 로고    scopus 로고
    • Introduction and evaluation of Martlet: A scientific workflow language for abstracted parallelisation
    • DOI 10.1145/1242572.1242705, 16th International World Wide Web Conference, WWW2007
    • Goodman, D. J., Introduction and evaluation of Martlet: a scientific workflow language for abstracted parallelization. In WWW '07: Proceedings of the 16th international conference on World Wide Web. New York, NY, USA: ACM, 2007, pp. 983-992. (Pubitemid 47582328)
    • (2007) 16th International World Wide Web Conference, WWW2007 , pp. 983-992
    • Goodman, D.J.1
  • 8
    • 74049123821 scopus 로고    scopus 로고
    • Kepler + hadoop: A general architecture facilitating data-intensive applications in scientific workflow systems
    • Portland, Oregon: ACM New York, NY, USA
    • Wang, J., Crawl, D., and Altintas, I., Kepler + Hadoop: A general architecture facilitating data-intensive applications in scientific workflow systems. In WORKS '09: Proceedings of the 4th Workshop on Workflows in Support of Large-Scale Science. Portland, Oregon: ACM New York, NY, USA, 2009, pp. 1-8.
    • (2009) WORKS '09: Proceedings of the 4th Workshop on Workflows in Support of Large-scale Science , pp. 1-8
    • Wang, J.1    Crawl, D.2    Altintas, I.3
  • 11
    • 72849120252 scopus 로고    scopus 로고
    • Accelerating parameter sweep workflows by utilizing ad-hoc network computing resources: An ecological example
    • IEEE Congress on. IEEE Computer Society
    • Wang, J., Altintas, I., Hosseini, P. R., Barseghian, D., Crawl, D., Berkley, C., and Jones, M. B., Accelerating parameter sweep workflows by utilizing ad-hoc network computing resources: An ecological example. In Services, IEEE Congress on. IEEE Computer Society, 2009, pp. 267-274.
    • (2009) Services , pp. 267-274
    • Wang, J.1    Altintas, I.2    Hosseini, P.R.3    Barseghian, D.4    Crawl, D.5    Berkley, C.6    Jones, M.B.7
  • 12
    • 84867171584 scopus 로고    scopus 로고
    • Triana applications within grid computing and peer to peer environments
    • Taylor, I., Shields, M., Wang, I., and Rana, O., Triana applications within grid computing and peer to peer environments. Journal of Grid Computing, vol. 1, 2003.
    • (2003) Journal of Grid Computing , vol.1
    • Taylor, I.1    Shields, M.2    Wang, I.3    Rana, O.4
  • 13
    • 84892262261 scopus 로고    scopus 로고
    • Pegasus: Mapping large-scale workflows to distributed resources
    • I. J. Taylor, E. Deelman, D. B. Gannon, and M. Shields, Eds. Springer London
    • Deelman, E., Mehta, G., Singh, G., Su, M.H., and Vahi, K., Pegasus: Mapping large-scale workflows to distributed resources. In Workflows for e-Science, I. J. Taylor, E. Deelman, D. B. Gannon, and M. Shields, Eds. Springer London, 2007, pp. 376-394.
    • (2007) Workflows for E-science , pp. 376-394
    • Deelman, E.1    Mehta, G.2    Singh, G.3    Su, M.H.4    Vahi, K.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.