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Volumn 13, Issue 1, 2012, Pages

Genome-wide analysis of hepatic LRH-1 reveals a promoter binding preference and suggests a role in regulating genes of lipid metabolism in concert with FXR

Author keywords

CHIP seq; FXR; Lipid metabolism; LRH 1

Indexed keywords

CELL NUCLEUS RECEPTOR; FARNESOID X RECEPTOR; LIVER RECEPTOR HOMOLOG 1; NUCLEAR RECEPTOR NR4A; RETINOID RELATED ORPHAN RECEPTOR; UNCLASSIFIED DRUG; CELL RECEPTOR; FARNESOID X-ACTIVATED RECEPTOR; NR5A2 PROTEIN, MOUSE;

EID: 84857919534     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-13-51     Document Type: Article
Times cited : (33)

References (27)
  • 1
    • 34547731515 scopus 로고    scopus 로고
    • Nuclear receptor coregulators and human disease
    • 10.1210/er.2007-0012, 17609497
    • Lonard DM, Lanz RB, O'Malley BW. Nuclear receptor coregulators and human disease. Endocr Rev 2007, 28(5):575-587. 10.1210/er.2007-0012, 17609497.
    • (2007) Endocr Rev , vol.28 , Issue.5 , pp. 575-587
    • Lonard, D.M.1    Lanz, R.B.2    O'Malley, B.W.3
  • 2
    • 50449111314 scopus 로고    scopus 로고
    • Nuclear receptor drug discovery
    • 10.1016/j.cbpa.2008.07.001, 18662801
    • Chen T. Nuclear receptor drug discovery. Curr Opin Chem Biol 2008, 12(4):418-426. 10.1016/j.cbpa.2008.07.001, 18662801.
    • (2008) Curr Opin Chem Biol , vol.12 , Issue.4 , pp. 418-426
    • Chen, T.1
  • 3
    • 0034650893 scopus 로고    scopus 로고
    • The coregulator exchange in transcriptional functions of nuclear recpetors
    • 3268767, 22303482
    • Glass CK, Rosenfeld MG. The coregulator exchange in transcriptional functions of nuclear recpetors. Genes & Dev 2000, 14:121-141. 3268767, 22303482.
    • (2000) Genes & Dev , vol.14 , pp. 121-141
    • Glass, C.K.1    Rosenfeld, M.G.2
  • 4
    • 0042315339 scopus 로고    scopus 로고
    • Differential expression of steroidogenic factor-1 and FTF/LRH-1 in the rodent ovary
    • 10.1210/en.2002-0137, 12865342
    • Falender AE, Lanz R, Malenfant D, Belanger L, Richards JS. Differential expression of steroidogenic factor-1 and FTF/LRH-1 in the rodent ovary. Endocrinology 2003, 144(8):3598-3610. 10.1210/en.2002-0137, 12865342.
    • (2003) Endocrinology , vol.144 , Issue.8 , pp. 3598-3610
    • Falender, A.E.1    Lanz, R.2    Malenfant, D.3    Belanger, L.4    Richards, J.S.5
  • 5
    • 2442676745 scopus 로고    scopus 로고
    • The fetoprotein transcription factor (FTF) gene is essential to embryogenesis and cholesterol homeostasis and is regulated by a DR4 element
    • 10.1074/jbc.M401523200, 15014077
    • Pare JF, Malenfant D, Courtemanche C, Jacob-Wagner M, Roy S, Allard D, Belanger L. The fetoprotein transcription factor (FTF) gene is essential to embryogenesis and cholesterol homeostasis and is regulated by a DR4 element. The Journal of biological chemistry 2004, 279(20):21206-21216. 10.1074/jbc.M401523200, 15014077.
    • (2004) The Journal of biological chemistry , vol.279 , Issue.20 , pp. 21206-21216
    • Pare, J.F.1    Malenfant, D.2    Courtemanche, C.3    Jacob-Wagner, M.4    Roy, S.5    Allard, D.6    Belanger, L.7
  • 7
    • 0042817910 scopus 로고    scopus 로고
    • Liver receptor homolog 1 controls the expression of carboxyl ester lipase
    • 10.1074/jbc.M302370200, 12853459
    • Fayard E, Schoonjans K, Annicotte JS, Auwerx J. Liver receptor homolog 1 controls the expression of carboxyl ester lipase. The Journal of biological chemistry 2003, 278(37):35725-35731. 10.1074/jbc.M302370200, 12853459.
    • (2003) The Journal of biological chemistry , vol.278 , Issue.37 , pp. 35725-35731
    • Fayard, E.1    Schoonjans, K.2    Annicotte, J.S.3    Auwerx, J.4
  • 8
    • 52049108214 scopus 로고    scopus 로고
    • Liver receptor homolog-1, an emerging metabolic modulator
    • Lee YK, Moore DD. Liver receptor homolog-1, an emerging metabolic modulator. Front Biosci 2008, 13:5950-5958.
    • (2008) Front Biosci , vol.13 , pp. 5950-5958
    • Lee, Y.K.1    Moore, D.D.2
  • 11
    • 79959560633 scopus 로고    scopus 로고
    • A nuclear-receptor-dependent phosphatidylcholine pathway with antidiabetic effects
    • 10.1038/nature10111, 3150801, 21614002
    • Lee JM, Lee YK, Mamrosh JL, Busby SA, Griffin PR, Pathak MC, Ortlund EA, Moore DD. A nuclear-receptor-dependent phosphatidylcholine pathway with antidiabetic effects. Nature 2011, 474(7352):506-510. 10.1038/nature10111, 3150801, 21614002.
    • (2011) Nature , vol.474 , Issue.7352 , pp. 506-510
    • Lee, J.M.1    Lee, Y.K.2    Mamrosh, J.L.3    Busby, S.A.4    Griffin, P.R.5    Pathak, M.C.6    Ortlund, E.A.7    Moore, D.D.8
  • 13
    • 75349088911 scopus 로고    scopus 로고
    • The nuclear receptor Nr5a2 can replace Oct4 in the reprogramming of murine somatic cells to pluripotent cells
    • 10.1016/j.stem.2009.12.009, 20096661
    • Heng JC, Feng B, Han J, Jiang J, Kraus P, Ng JH, Orlov YL, Huss M, Yang L, Lufkin T, Lim B, Ng HH. The nuclear receptor Nr5a2 can replace Oct4 in the reprogramming of murine somatic cells to pluripotent cells. Cell Stem Cell 2010, 6(2):167-174. 10.1016/j.stem.2009.12.009, 20096661.
    • (2010) Cell Stem Cell , vol.6 , Issue.2 , pp. 167-174
    • Heng, J.C.1    Feng, B.2    Han, J.3    Jiang, J.4    Kraus, P.5    Ng, J.H.6    Orlov, Y.L.7    Huss, M.8    Yang, L.9    Lufkin, T.10    Lim, B.11    Ng, H.H.12
  • 14
    • 77954987308 scopus 로고    scopus 로고
    • Genome-wide interrogation of hepatic FXR reveals an asymmetric IR-1 motif and synergy with LRH-1
    • 10.1093/nar/gkq397, 2952856, 20483916
    • Chong HK, Infante AM, Seo YK, Jeon TI, Zhang Y, Edwards PA, Xie X, Osborne TF. Genome-wide interrogation of hepatic FXR reveals an asymmetric IR-1 motif and synergy with LRH-1. Nucleic Acids Res 2010, 38(18):6007-6017. 10.1093/nar/gkq397, 2952856, 20483916.
    • (2010) Nucleic Acids Res , vol.38 , Issue.18 , pp. 6007-6017
    • Chong, H.K.1    Infante, A.M.2    Seo, Y.K.3    Jeon, T.I.4    Zhang, Y.5    Edwards, P.A.6    Xie, X.7    Osborne, T.F.8
  • 16
    • 54049125005 scopus 로고    scopus 로고
    • Discovering novel sequence motifs with MEME
    • Unit 2 4
    • Bailey TL. Discovering novel sequence motifs with MEME. Curr Protoc Bioinformatics 2002, Chapter 2. Unit 2 4.
    • (2002) Curr Protoc Bioinformatics , vol.Chapter 2
    • Bailey, T.L.1
  • 17
    • 34547111086 scopus 로고    scopus 로고
    • A key role for orphan nuclear receptor liver receptor homologue-1 in activation of fatty acid synthase promoter by liver × receptor
    • 10.1074/jbc.M702895200, 17522048
    • Matsukuma KE, Wang L, Bennett MK, Osborne TF. A key role for orphan nuclear receptor liver receptor homologue-1 in activation of fatty acid synthase promoter by liver × receptor. The Journal of biological chemistry 2007, 282(28):20164-20171. 10.1074/jbc.M702895200, 17522048.
    • (2007) The Journal of biological chemistry , vol.282 , Issue.28 , pp. 20164-20171
    • Matsukuma, K.E.1    Wang, L.2    Bennett, M.K.3    Osborne, T.F.4
  • 18
    • 44749090905 scopus 로고    scopus 로고
    • Sp1: emerging roles--beyond constitutive activation of TATA-less housekeeping genes
    • 10.1016/j.bbrc.2008.03.074, 18364237
    • Wierstra I. Sp1: emerging roles--beyond constitutive activation of TATA-less housekeeping genes. Biochemical and biophysical research communications 2008, 372(1):1-13. 10.1016/j.bbrc.2008.03.074, 18364237.
    • (2008) Biochemical and biophysical research communications , vol.372 , Issue.1 , pp. 1-13
    • Wierstra, I.1
  • 19
    • 0038005018 scopus 로고    scopus 로고
    • DAVID: Database for Annotation, Visualization, and Integrated Discovery
    • 10.1186/gb-2003-4-5-p3, 12734009
    • Dennis G, Sherman BT, Hosack DA, Yang J, Gao W, Lane HC, Lempicki RA. DAVID: Database for Annotation, Visualization, and Integrated Discovery. Genome Biol 2003, 4(5):P3. 10.1186/gb-2003-4-5-p3, 12734009.
    • (2003) Genome Biol , vol.4 , Issue.5
    • Dennis, G.1    Sherman, B.T.2    Hosack, D.A.3    Yang, J.4    Gao, W.5    Lane, H.C.6    Lempicki, R.A.7
  • 21
    • 0033636789 scopus 로고    scopus 로고
    • Molecular basis for feedback regulation of bile acid synthesis by nuclear receptors
    • 10.1016/S1097-2765(00)00050-2, 11030331
    • Lu TT, Makishima M, Repa JJ, Schoonjans K, Kerr TA, Auwerx J, Mangelsdorf DJ. Molecular basis for feedback regulation of bile acid synthesis by nuclear receptors. Molecular cell 2000, 6(3):507-515. 10.1016/S1097-2765(00)00050-2, 11030331.
    • (2000) Molecular cell , vol.6 , Issue.3 , pp. 507-515
    • Lu, T.T.1    Makishima, M.2    Repa, J.J.3    Schoonjans, K.4    Kerr, T.A.5    Auwerx, J.6    Mangelsdorf, D.J.7
  • 23
    • 77957329141 scopus 로고    scopus 로고
    • Minireview: Nuclear hormone receptor 4A signaling: implications for metabolic disease
    • Pearen MA, Muscat GE. Minireview: Nuclear hormone receptor 4A signaling: implications for metabolic disease. Molecular endocrinology (Baltimore, Md) 2010, 24(10):1891-1903.
    • (2010) Molecular endocrinology (Baltimore, Md) , vol.24 , Issue.10 , pp. 1891-1903
    • Pearen, M.A.1    Muscat, G.E.2
  • 25
    • 47049092561 scopus 로고    scopus 로고
    • Selective Binding of SREBP isoforms and Co-Regulatory Proteins to Promoters for Lipid Metabolic Genes in Liver
    • 10.1074/jbc.M800391200, 2414284, 18413311
    • Bennett MK, Seo Y-K, Datta S, Shin D-J, Osborne TF. Selective Binding of SREBP isoforms and Co-Regulatory Proteins to Promoters for Lipid Metabolic Genes in Liver. The Journal of biological chemistry 2008, 283:15628-15637. 10.1074/jbc.M800391200, 2414284, 18413311.
    • (2008) The Journal of biological chemistry , vol.283 , pp. 15628-15637
    • Bennett, M.K.1    Seo, Y.-K.2    Datta, S.3    Shin, D.-J.4    Osborne, T.F.5
  • 26
    • 69549138559 scopus 로고    scopus 로고
    • Genome-wide analysis of SREBP-1 binding in mouse liver chromatin reveals a preference for promoter proximal binding to a new motif
    • 10.1073/pnas.0904246106, 2728968, 19666523
    • Seo YK, Chong HK, Infante AM, Im SS, Xie X, Osborne TF. Genome-wide analysis of SREBP-1 binding in mouse liver chromatin reveals a preference for promoter proximal binding to a new motif. Proceedings of the National Academy of Sciences of the USA 2009, 106(33):13765-13769. 10.1073/pnas.0904246106, 2728968, 19666523.
    • (2009) Proceedings of the National Academy of Sciences of the USA , vol.106 , Issue.33 , pp. 13765-13769
    • Seo, Y.K.1    Chong, H.K.2    Infante, A.M.3    Im, S.S.4    Xie, X.5    Osborne, T.F.6
  • 27
    • 79953756678 scopus 로고    scopus 로고
    • Genome-wide Localization of SREBP-2 in Hepatic Chromatin Predicts a Role in Autophagy
    • 10.1016/j.cmet.2011.03.005, 21459322
    • Seo YK, Jeon TI, Chong HK, Biesinger J, Xie X, Osborne TF. Genome-wide Localization of SREBP-2 in Hepatic Chromatin Predicts a Role in Autophagy. Cell metabolism 2011, 13(4):367-375. 10.1016/j.cmet.2011.03.005, 21459322.
    • (2011) Cell metabolism , vol.13 , Issue.4 , pp. 367-375
    • Seo, Y.K.1    Jeon, T.I.2    Chong, H.K.3    Biesinger, J.4    Xie, X.5    Osborne, T.F.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.