Agarose-gel-immobilized recombinant bacterial biosensors for simple and disposable on-site detection of phenolic compounds

Applied Microbiology and Biotechnology

Volumn 93, Issue 5, 2012, Pages 1895-1904

  Shin, Hae Ja ^a  

^a Dongseo University   (South Korea)

Author keywords

Agarose; Immobilization; Phenolic compounds; Recombinant bacterial biosensor

Indexed keywords

2-CHLOROPHENOLS; 2-METHYLPHENOL; 2-NITROPHENOL; 4-CHLOROPHENOL; 96-WELL PLATE; AGAROSE; AGAROSE GEL; ANALYTES; BACTERIAL BIOSENSOR; CHLOROPHENOLS; COLOR DEVELOPMENT; DETECTION RANGE; ENVIRONMENTAL SAMPLE; ESCHERICHIA COLI CELLS; FIELD MONITORING; GALACTOPYRANOSIDE; GALACTOSIDASES; INTACT CELLS; ON-SITE DETECTION; ON-SITE MONITORING; PHENOLIC COMPOUNDS; PRE-TREATMENT; REPORTER GENE;

BIOSENSORS; COLOR; ESCHERICHIA COLI; GENES; RADIOACTIVE WASTE VITRIFICATION; WELLS;

PHENOLS;

2 CHLOROPHENOL; 2 NITROPHENOL; 2,5 XYLENOL; 4 CHLOROPHENOL; AGAROSE; BETA GALACTOSIDASE; CATECHOL; CHLOROPHENOL RED BETA GALACTOPYRANOSIDE; META CRESOL; ORTHO CRESOL; PHENOL DERIVATIVE; PYRANOSIDE; RESORCINOL; UNCLASSIFIED DRUG;

COLIFORM BACTERIUM; GEL; IMMOBILIZATION; PHENOLIC COMPOUND; SUBSTRATE;

ARTICLE; BIOSENSOR; COLOR; CONTROLLED STUDY; ESCHERICHIA COLI; IMMOBILIZATION; PLASMID;

BETA-GALACTOSIDASE; BIOSENSING TECHNIQUES; CELLS, IMMOBILIZED; COLOR; ESCHERICHIA COLI; GELS; GENES, REPORTER; GENETIC VECTORS; PHENOLS; PLASMIDS; SEPHAROSE;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI;

EID: 84857912632     PISSN: 01757598     EISSN: 14320614     Source Type: Journal    
DOI: 10.1007/s00253-011-3700-x     Document Type: Article

References (32)

1. Alvarez GS, Foglia ML, Copello GJ, Desimone MF, Diaz LE (2009) Effect of various parameters on viability and growth of bacteria immobilized in sol-gel-derived silica matrices. Appl Microbiol Biotechnol 82:639-646
2. Belkin S (2003) Microbial whole-cell sensing systems of environmental pollutants. Curr Opin Microbiol 6:206-212
3. Bettaieb F, Ponsonnet L, Lejeune P, Ben Ouada H, Martelet C, Bakhrouf A, Jaffrézic-Renault N, Othmane A (2007) Immobilization of E. coli bacteria in three-dimensional matrices for ISFET biosensor design. Bioelectrochemistry 71:118-125 (Pubitemid 47589065)
4. Bruce RM, Santodonato J, Neal MW (1987) Summary review of the health effects associated with phenol. Toxicol Ind Health 3:535-568
5. D'Souza SF (2001) Microbial biosensors. Biosens Bioelectron 16:337-353
6. Da Silva S, Grosjean L, Ternan N, Mailley P, Livache T, Cosnier S (2004) Biotinylated polypyrrole films: an easy electrochemical approach for the reagentless immobilization of bacteria on electrode surfaces. Bioelectrochemistry 63:297-301 (Pubitemid 38534238)
7. Desimone MF, De Marzi MC, Copello GJ, Fernández MM, Pieckenstain FL, Malchiodi EL, Diaz LE (2006) Production of recombinant proteins by sol-gel immobilized Escherichia coli. Enzyme Microb Technol 40:168-171 (Pubitemid 44556767)
8. Diaz E, Prieto MA (2000) Bacterial promoters triggering biodegradation of aromatic pollutants. Curr Opin Biotechnol 11:467-475
9. EPA (2011) Priority pollutants. http://www.epa.gov/ostwater/methods/ pollutants.htm. Accessed 10 Mar 2011
10. Eustice DC, Feldman PA, Colberg-Poley AM, Buckery RM, Neubauer RH (1991) A sensitive method for the detection of beta-galactosidase in transfected mammalian cells. Biotechniques 11:739-743
11. Galvão TC, de Lorenzo V (2006) Transcriptional regulators à la carte: engineering new effector specificities in bacterial regulatory proteins. Curr Opin Biotechnol 17:34-42
12. Hansen LH, Sørensen SJ (2001) The use of whole-cell biosensors to detect and quantify compounds or conditions affecting biological systems. Microb Ecol 42:483-494 (Pubitemid 34045789)
13. Harms H, Wells MC, van der Meer JR (2006) Whole-cell living biosensors - are they ready for environmental application? Appl Microbiol Biotechnol 70:273-280 (Pubitemid 43345151)
14. Jha SK, Kanungo M, Nath A, D'Souza SF (2009) Entrapment of live microbial cells in electropolymerized polyaniline and their use as urea biosensor. Biosens Bioelectron 24:2637-2642
15. Keane A, Phoenix P, Ghoshal S, Lau PCK (2002) Exposing culprit organic pollutants: a review. J Microbiol Methods 49:103-119 (Pubitemid 34122018)
16. Kim MN, Park HH, Lim WK, Shin HJ (2003) Viability and luciferase activity of freeze-dried recombinant biosensor cells for detecting aromatic hydrocarbons. J Biomed Lab Sci 9:195-201
17. Kim MN, Park HH, Lim WK, Shin HJ (2005) Construction and comparison of Escherichia coli whole-cell biosensors capable of detecting aromatic compounds. J Microbiol Methods 60:235-245 (Pubitemid 39601737)
18. Lei Y, Mulchandani P, Wang J, Chen W, Mulchandani A (2005) Highly sensitive and selective amperometric microbial biosensor for direct determination of p-nitropenyl-substituted organophosphate nerve agents. Environ Sci Technol 39:8853-8857 (Pubitemid 41636156)
19. Lei Y, Chen W, Mulchandani A (2006) Microbial biosensors. Anal Chim Acta 568:200-210 (Pubitemid 43729740)
20. Medintz IL, Deschamps JR (2006) Maltose-binding protein: a versatile platform for prototyping biosensing. Curr Opin Biotechnol 17:17-27 (Pubitemid 43190753)
21. Park SM, Park HH, Lim WK, Shin HJ (2003) A new variant activator involved in the degradation of phenolic compounds from a strain of Pseudomonas putida. J Biotechnol 103:227-236 (Pubitemid 37271905)
22. Park HH, Lee HY, Lim WK, Shin HJ (2005a) NahR: effects of replacements at Asn 169 and Arg 248 on promoter binding and inducer recognition. Arch Biochem Biophys 434:67-74 (Pubitemid 40040472)
23. Park HH, Lim WK, Shin HJ (2005b) In vitro binding of purified NahR regulatory protein with promoter Psal. Biochim Biophys Acta 1725:247-255
24. Ron EZ (2007) Biosensing environmental pollution. Curr Opin Biotechnol 18:252-256
25. Sambrook J, Fritsch EF, Maniatis T (2001) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor
26. Shin HJ (2010) Development of highly-sensitive microbial biosensor by mutation of the nahR regulatory gene. J Biotechnol 150:246-250
27. Shin HJ (2011) Genetically engineered microbial biosensors for in situ monitoring of environmental pollution. Appl Microbiol Biotechnol 89:867-877
28. Shin HJ, Park HH, Lim WK (2005) Freeze-dried recombinant bacteria for on-site detection of phenolic compounds by color change. J Biotechnol 119:36-43 (Pubitemid 41112615)
29. Tover A, Zernant J, Chugani SA, Chakrabarty AM, Kivisaar M (2000) Critical nucleotides in the interaction of CatR with the pheBA promoter: conservation of the CatR-mediated regulation mechanisms between the pheBA and catBCA operons. Microbiology 146:173-183 (Pubitemid 30066319)
30. Trang PT, Berg M, Viet PH, Van Mui N, van der Meer JR (2005) Bacterial bioassay for rapid and accurate analysis of arsenic in highly variable groundwater samples. Environ Sci Technol 39:7625-7630 (Pubitemid 41407495)
31. Vollmer AC, Van Dyk TK (2004) Stress responsive bacteria: biosensors as environmental monitors. Adv Microb Physiol 49:131-174
32. Yagi K (2007) Applications of whole-cell bacterial sensors in biotechnology and environmental science. Appl Microbiol Biotechnol 73:1251-1258