Anaerobic utilization of pectinous substrates at extremely haloalkaline conditions by Natranaerovirga pectinivora gen. nov., sp. nov., and Natranaerovirga hydrolytica sp. nov., isolated from hypersaline soda lakes

Extremophiles

Volumn 16, Issue 2, 2012, Pages 307-315

  Sorokin, D Y ^a,b   Tourova, T P ^a   Panteleeva, A N ^c   Kaparullina, E N ^d   Muyzer, G ^b,e  

^a WINOGRADSKY INSTITUTE OF MICROBIOLOGY   (Russian Federation)

^b DELFT UNIVERSITY OF TECHNOLOGY   (Netherlands)

^c INSTITUTE OF BIOENGINEERING   (Russian Federation)

^d SKRYABIN INSTITUTE OF BIOCHEMISTRY AND PHYSIOLOGY OF MICROORGANISMS   (Russian Federation)

^e UNIVERSITY OF AMSTERDAM   (Netherlands)

Author keywords

Haloalkaliphilic; Pectin; Pectinolytic; Soda lakes

Indexed keywords

BACTERIA (MICROORGANISMS); CLOSTRIDIALES; LACHNOSPIRACEAE;

EID: 84857911766     PISSN: 14310651     EISSN: 14334909     Source Type: Journal    
DOI: 10.1007/s00792-012-0431-6     Document Type: Article

References (22)

1. Cornick NA, Jensen NS, Stahl DA, Hartman PA, Allison MJ (1994) Lachnospira pectinoschiza sp. nov, an anaerobic pectinophile from the pig intestine. Int J Syst Bacteriol 44: 87-93.
2. Cotta MA, Whitehead TR, Falsen E, Moore E, Lawson PA (2009) Robinsoniella peoriensis gen. nov., sp. nov., isolated from a swine-manure storage pit and a human clinical source. Int J Evol Syst Microbiol 59: 150-155.
3. De Ley J, Caffon H, Reinaerts A (1970) The quantitative measurements of hybridisation DNA from renaturation rates. Eur J Biochem 12: 133-140.
4. Gang L, Rao L, Xuel Y, Zhou C, Zhang Y, Ma Y (2010) Cloning, expression, and characterization of a highly active alkaline pectate lyase from alkaliphilic Bacillus sp. N16-5. J Microbiol Biotechnol 20: 670-677.
5. Hoondal GS, Tiwari RP, Tewari R, Dahiya N, Beg QK (2002) Microbial alkaline pectinases and their industrial applications: a review. Appl Microbiol Biotechnol 59: 409-418.
6. Jayani RS, Saxena S, Gupta R (2005) Microbial pectinolytic enzymes: a review. Process Biochem 40: 2931-2944.
7. Kashyap DR, Vohra PK, Chopra S, Tewari R (2001) Applications of pectinases in the commercial sector: a review. Bioresour Technol 77: 215-227.
8. Kates M (1972) Techniques of lipidology. American Elsevier Publishing Co., New York.
9. Lane DJ (1991) 16S/23S rRNA sequencing. In: Stackebrandt E, Goodfellow M (eds) Nucleic acid techniques in bacterial systematics. Wiley, Chichester, pp 115-177.
10. Marmur J (1961) A procedure for isolation of DNA from microorganisms. J Mol Biol 3: 208-214.
11. Marmur J, Doty P (1962) Determination of the base composition of deoxyribonucleic acid from microorganisms. J Mol Biol 5: 109-118.
12. Miller GL (1959) Use of dinitrosalicylic acid reagent for determination of reducing sugar. Anal Chem 31: 426.
13. Omelyansky VL (1904) Histologic and chemical changes in the flux stems during pectin and cellulose fermentation. Centr Bakt XII(2).
14. Park HS, Kim BH, Kim HS, Kim HJ, Kim GT, Kim M, Chang IS, Park YK, Chang HI (2001) A novel electrochemically active and Fe(III)-reducing bacterium phylogenetically related to Clostridium butyricum isolated from a microbial fuel cell. Anaerobe 7: 297-306.
15. 12-Bedürfnis phototropher SchwefelbakterienH. Arch Mikrobiol 55: 245-256.
16. Rainey FA (2009) Order Clostridiales. In: Bergey's manual of systematic bacteriology. In: De Vos P, Garrity GM, Jones D, Krieg NR, Ludwig W, Rainey FA, Schleifer K-H, Whitman WB (eds) The Firmicutes, vol 3. Springer, Dordrecht, pp 736-1190.
17. Sarethy IP, Saxena Y, Kapoor A, Sharma M, Sharma SK, Gupta V, Gupta S (2011) Alkaliphilic bacteria: applications in industrial biotechnology. J Ind Microbiol Biotechnol 38: 769-790.
18. Sorokin DY, Panteleeva AN, Tourova TP, Kaparullina EN, Muyzer G (2011) Natronoflexus pectinivorans gen. nov., sp. nov., an obligately anaerobic and alkaliphilic fermentative member of Bacteroidetes from soda lakes. Extremophiles 15: 691-696.
19. Sumner JB, Dounce AL (1963) Liver catalase. Methods Enzymol 2: 780.
20. van de Peer Y, de Wachter R (1994) TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment. Comput Appl Biosci 10: 569-570.
21. Zhilina TN, Zavarzin GA, Rainey FA, Pikuta EN, Osipov GA, Kostrikina NA (1997) Desulfonatronovibrio hydrogenovorans gen. nov., sp. nov., an alkaliphilic, sulfate-reducing bacterium. Int J Syst Bacteriol 47: 144-149.
22. Zhilina TN, Appel R, Probian C, Brossa EL, Harder J, Widdel F, Zavarzin GA (2004) Alkaliflexus imshenetskii gen. nov. sp. nov., a new alkaliphilic gliding carbohydrate-fermenting bacterium with propionate formation from a soda lake. Arch Microbiol 182: 244-253.