Magnetically oriented dodecylphosphocholine bicelles for solid-state NMR structure analysis

Biochimica et Biophysica Acta - Biomembranes

Volumn 1818, Issue 5, 2012, Pages 1142-1147

  Nolandt, Olga V ^a   Walther, Torsten H ^a   Grage, Stephan L ^a   Ulrich, Anne S ^a  

^a KARLSRUHE INSTITUTE OF TECHNOLOGY   (Germany)

Author keywords

DMPC DPC bicelles; Dodecylphosphocholine; Membrane protein; PISEMA; Solid state NMR; Twin arginine translocation

Indexed keywords

AMPHOLYTE; DIMYRISTOYLPHOSPHATIDYLCHOLINE; DODECYLPHOSPHORYLCHOLINE; LANTHANIDE;

ACCURACY; ANISOTROPY; ARTICLE; CONCENTRATION (PARAMETERS); CONTROLLED STUDY; MAGNETIC FIELD; MICELLE; MOLECULAR STABILITY; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PREDICTION; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN FOLDING; PROTEIN PURIFICATION; PROTON NUCLEAR MAGNETIC RESONANCE; SENSITIVITY AND SPECIFICITY; SIGNAL TRANSDUCTION; SOLID STATE; STRUCTURE ANALYSIS; TEMPERATURE DEPENDENCE; TRANSITION TEMPERATURE; VALIDATION PROCESS;

DIMYRISTOYLPHOSPHATIDYLCHOLINE; MEMBRANE PROTEINS; MEMBRANES, ARTIFICIAL; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PHOSPHORYLCHOLINE;

EID: 84857769505     PISSN: 00052736     EISSN: 18792642     Source Type: Journal    
DOI: 10.1016/j.bbamem.2012.01.007     Document Type: Article

References (37)

1. C.R. Sanders, and G.C. Landis Reconstitution of membrane proteins into lipid-rich bilayered mixed micelles for NMR studies Biochemistry 34 1995 4030 4040
2. P. Ram, and J.H. Prestegard Magnetic field induced ordering of bile salt/phospholipid micelles: new media for NMR structural investigations Biochim. Biophys. Acta 940 1988 289 294
3. R.S. Prosser, J.S. Hwang, and R.R. Vold Magnetically aligned phospholipid bilayers with positive ordering: a new model membrane system Biophys. J. 74 1998 2405 2418
4. C.R. Sanders, and J.P. Schwonek Characterization of magnetically orientable bilayers in mixtures of dihexanoylphosphatidylcholine and dimyristoylphosphatidylcholine by solid-state NMR Biochemistry 31 1992 8898 8905
5. C.R. Sanders, and J.H. Prestegard Magnetically orientable phospholipid bilayers containing small amounts of a bile salt analogue, CHAPSO Biophys. J. 58 1990 447 460
6. A. Diller, C. Loudet, F. Aussenac, G. Raffard, S. Fournier, M. Laguerre, A. Grelard, S.J. Opella, F.M. Marassi, and E.J. Dufourc Bicelles: A natural 'molecular goniometer' for structural, dynamical and topological studies of molecules in membranes Biochimie 91 2009 744 751
7. J.J. Chou, J.L. Baber, and A. Bax Characterization of phospholipid mixed micelles by translational diffusion J. Biomol. NMR 29 2004 299 308
8. J. Struppe, E.A. Komives, S.S. Taylor, and R.R. Vold 2H NMR studies of a myristoylated peptide in neutral and acidic phospholipid bicelles Biochemistry 37 1998 15523 15527
9. C. Loudet, L. Khemtemourian, F. Aussenac, S. Gineste, M.F. Achard, and E.J. Dufourc Bicelle membranes and their use for hydrophobic peptide studies by circular dichroism and solid state NMR Biochim. Biophys. Acta 1724 2005 315 323
10. C. Loudet, S. Manet, S. Gineste, R. Oda, M.F. Achard, and E.J. Dufourc Biphenyl bicelle disks align perpendicular to magnetic fields on large temperature scales: a study combining synthesis, solid-state NMR, TEM, and SAXS Biophys. J. 92 2007 3949 3959
11. S.H. Park, C. Loudet, F.M. Marassi, E.J. Dufourc, and S.J. Opella Solid-state NMR spectroscopy of a membrane protein in biphenyl phospholipid bicelles with the bilayer normal parallel to the magnetic field J. Magn. Reson. 193 2008 133 138
12. M.A. Parker, V. King, and K.P. Howard Nuclear magnetic resonance study of doxorubicin binding to cardiolipin containing magnetically oriented phospholipid bilayers Biochim. Biophys. Acta 1514 2001 206 216
13. G. Anderluh, A. Razpotnik, Z. Podlesek, P. Macek, F. Separovic, and R.S. Norton Interaction of the eukaryotic pore-forming cytolysin equinatoxin II with model membranes: 19F NMR studies J. Mol. Biol. 347 2005 27 39
14. I. Marcotte, and M. Auger Bicelles as model membranes for solid- and solution-state NMR studies of membrane peptides and proteins Concept Magn. Res. Part A 24A 2005 17 37
15. S.H. Park, and S.J. Opella Triton X-100 as the "Short-Chain Lipid" improves the magnetic alignment and stability of membrane proteins in phosphatidylcholine bilayers for oriented-sample solid-state NMR spectroscopy J. Am. Chem. Soc. 132 2010 12552 12553
16. J. Katsaras, T. Harroun, J. Pencer, and M.-P. Nieh "Bicellar" lipid mixtures as used in biochemical and biophysical studies Naturwissenschaften 92 2005 355 366
17. R.S. Prosser, S.A. Hunt, J.A. DiNatale, and R.R. Vold Magnetically aligned membrane model systems with positive order parameter: switching the sign of Szz with paramagnetic ions J. Am. Chem. Soc. 118 1996 269 270
18. R.S. Prosser, F. Evanics, J.L. Kitevski, and M.S. Al-Abdul-Wahid Current applications of bicelles in NMR studies of membrane-associated amphiphiles and proteins Biochemistry 45 2006 8453 8465
19. A.A. De Angelis, and S.J. Opella Bicelle samples for solid-state NMR of membrane proteins Nat. Protoc. 2 2007 2332 2338
20. S.H. Park, S. Prytulla, A.A. De Angelis, J.M. Brown, H. Kiefer, and S.J. Opella High-resolution NMR spectroscopy of a GPCR in aligned bicelles J. Am. Chem. Soc. 128 2006 7402 7403
21. 15N-NMR Biochim. Biophys. Acta 1768 2007 3071 3079
22. J. Wang, J. Denny, C. Tian, S. Kim, Y. Mo, F. Kovacs, Z. Song, K. Nishimura, Z. Gan, R. Fu, J.R. Quine, and T.A. Cross Imaging membrane protein helical wheels J. Magn. Reson. 144 2000 162 167
23. T.H. Walther, S.L. Grage, N. Roth, and A.S. Ulrich Membrane alignment of the pore-forming component TatAd of the twin-arginine translocase from bacillus subtilis resolved by solid-state NMR spectroscopy J. Am. Chem. Soc. 132 2010 15945 15956
24. S.H. Park, A.A. De Angelis, A.A. Nevzorov, C.H. Wu, and S.J. Opella Three-dimensional structure of the transmembrane domain of Vpu from HIV-1 in aligned phospholipid bicelles Biophys. J. 91 2006 3032 3042
25. A.A. De Angelis, S.C. Howell, A.A. Nevzorov, and S.J. Opella Structure determination of a membrane protein with two trans-membrane helices in aligned phospholipid bicelles by solid-state NMR spectroscopy J. Am. Chem. Soc. 128 2006 12256 12267
26. A.A. De Angelis, A.A. Nevzorov, S.H. Park, S.C. Howell, A.A. Mrse, and S.J. Opella High-resolution NMR spectroscopy of membrane proteins in aligned bicelles J. Am. Chem. Soc. 126 2004 15340 15341
27. M.A. White, K.M. Clark, E.J. Grayhack, and M.E. Dumont Characteristics affecting expression and solubilization of yeast membrane proteins J. Mol. Biol. 365 2007 621 636
28. A.K. Mohanty, and M.C. Wiener Membrane protein expression and production: effects of polyhistidine tag length and position Protein Expr. Purif. 33 2004 311 325
29. X. Wang, R.L. Gill Jr., Q. Zhu, and F. Tian Bacterial expression, purification, and model membrane reconstitution of the transmembrane and cytoplasmic domains of the human APP binding protein LR11/SorLA for NMR studies Protein Expr. Purif. 77 2011 224 230
30. S. Kojima, and D.F. Blair Solubilization and Purification of the MotA/MotB Complex of Escherichia coli Biochemistry 43 2003 26 34
31. K. Oxenoid, and J.J. Chou The structure of phospholamban pentamer reveals a channel-like architecture in membranes Proc. Natl. Acad. Sci. U. S. A. 102 2005 10870 10875
32. S.F. Poget, and M.E. Girvin Solution NMR of membrane proteins in bilayer mimics: small is beautiful, but sometimes bigger is better Biochim. Biophys. Acta 1768 2007 3098 3106
33. Y. Hu, E. Zhao, H. Li, B. Xia, and C. Jin Solution NMR structure of the TatA component of the twin-arginine protein transport system from Gram-positive bacterium Bacillus subtilis J. Am. Chem. Soc. 132 2010 15942 15944
34. A. Arora, F. Abildgaard, J.H. Bushweller, and L.K. Tamm Structure of outer membrane protein A transmembrane domain by NMR spectroscopy Nat. Struct. Mol. Biol. 8 2001 334 338
35. C. Lange, S.D. Müller, T.H. Walther, J. Bürck, and A.S. Ulrich Structure analysis of the protein translocating channel TatA in membranes using a multi-construct approach Biochim. Biophys. Acta 1768 2007 2627 2634
36. A.A. Nevzorov, and S.J. Opella Selective averaging for high-resolution solid-state NMR spectroscopy of aligned samples J. Magn. Reson. 185 2007 59 70
37. R.C. Page, S. Lee, J.D. Moore, S.J. Opella, and T.A. Cross Backbone structure of a small helical integral membrane protein: a unique structural characterization Protein Sci. 18 2009 134 146