DNA ligases

Current Protocols in Molecular Biology

Volumn , Issue SUPPL.94, 2011, Pages

  Lohman, Gregory J S ^a   Tabor, Stanley ^b   Nichols, Nicole M ^a  

^a NEW ENGLAND BIOLABS   (United States)

^b HARVARD MEDICAL SCHOOL   (United States)

Author keywords

Blunt end ligation; Cloning; DNA ligation; T4 DNA ligase; Taq DNA ligase

Indexed keywords

COMPLEMENTARY DNA; DNA FRAGMENT; DOUBLE STRANDED DNA; POLYDEOXYRIBONUCLEOTIDE SYNTHASE; T4 DNA LIGASE; TAQ DNA LIGASE; UNCLASSIFIED DRUG; DNA LIGASE;

ARTICLE; DNA LIBRARY; DNA LIGATION; ENZYME SPECIFICITY; ESCHERICHIA COLI; INCUBATION TEMPERATURE; LIGASE CHAIN REACTION; LIGASE DETECTION REACTION; NONHUMAN; NUCLEIC ACID ANALYSIS; PRIORITY JOURNAL; ROOM TEMPERATURE; THERMOSTABILITY; ENZYME ACTIVITY; ENZYME ANALYSIS; ENZYME STABILITY; MOLECULAR BIOLOGY; MOLECULAR CLONING; NEXT GENERATION SEQUENCING;

EID: 84857647946     PISSN: 19343639     EISSN: 19343647     Source Type: Journal    
DOI: 10.1002/0471142727.mb0314s94     Document Type: Article

References (19)

1. Bang, D. and Church, G.M. 2008. Gene synthesis by circular assembly amplification. Nat. Methods 5:37-39.
2. Barany, F. 1991. The ligase chain reaction in a PCR world. PCR Methods Appl. 1:5-16.
3. Barany, F. and Gelfand, D.H. 1991. Cloning, overexpression and nucleotide sequence of a thermostable DNA ligase-encoding gene. Gene 109:1-11.
4. Bullard, D.R. and Bowater, R.P. 2006. Direct comparison of nick-joining activity of the nucleic acid ligases from bacteriophage T4. Biochem. J. 398:135-144.
5. Cherepanov, A.V. and de Vries, S. 2003. Kinetics and thermodynamics of nick sealing by T4 DNA ligase. Eur. J. Biochem. 270:4315-4325.
6. Eun, H.-M. 1996. DNA ligases. In Enzymology Primer for Recombinant DNA Technology, pp. 109-133. Academic Press, San Diego, Calif.
7. Gibson, D.G., Young, L., Chuang, R.Y., Venter, J.C., Hutchison, C.A., and Smith, H.O. 2009. Enzymatic assembly of DNA molecules up to several hundred kilobases. Nat. Methods 6:343-345.
8. Hayashi, K., Nakazawa,M., Ishizaki, Y., Hiraoka, N., and Obayashi, A. 1985. Stimulation of intermolecular ligation with E. coli DNA ligase by high concentrations of monovalent cations in polyethylene glycol solutions. Nucleic Acids Res. 13:7979-7992.
9. Hayashi, K., Nakazawa, M., Ishizaki, Y., Hiraoka, N., and Obayashi, A. 1986. Regulation of inter- and intramolecular ligation with T4 DNA ligase in the presence of polyethylene glycol. Nucleic Acids Res. 14:7617-7631.
10. Kim, J. and Mrksich, M. 2010. Profiling the selectivity of DNA ligases in an array format with mass spectrometry. Nucleic Acids Res. 38:e2.
11. Okayama, H. and Berg, P. 1982. High-efficiency cloning of full-length cDNA. Mol. Cell Biol. 2:161-170.
12. Panasenko, S.M., Alazard, R.J., and Lehman, I.R. 1978. A simple, three-step procedure for the large scale purification of DNA ligase from a hybrid lambda lysogen constructed in vitro. J. Biol. Chem. 253:4590-4592.
13. Pascal, J.M. 2008. DNA and RNA ligases: Structural variations and shared mechanisms. Curr. Opin. Struct. Biol. 18:96-105.
14. Patel, M.P., Baum, D.A., and Silverman, S.K. 2008. Improvement of DNA adenylation using T4 DNA ligase with a template strand and a strategically mismatched acceptor strand. Bioorg. Chem. 36:46-56.
15. Pheiffer, B.H. and Zimmerman, S.B. 1983. Polymer-stimulated ligation: Enhanced blunt- or cohesive-end ligation of DNA or deoxyribooligonucleotides by T4 DNA ligase in polymer solutions. Nucleic Acids Res. 11:7853-7871.
16. Raae, A.J., Kleppe, R.K., and Kleppe, K. 1975. Kinetics and effect of salts and polyamines on T4 polynucleotide ligase. Eur. J. Biochem. 60:437-443.
17. Shuman, S. 2009. DNA ligases: Progress and prospects. J. Biol. Chem. 284:17365-17369.
18. Weiss, B. and Richardson, C.C. 1967. Enzymatic breakage and joining of deoxyribonucleic acid, I. Repair of single-strand breaks in DNA by an enzyme system from Escherichia coli infected with T4 bacteriophage. Proc. Natl. Acad. Sci. U.S.A. 57:1021-1028.
19. Weiss, B., Jacquemin-Sablon, A., Live, T.R., Fareed, G.C., and Richardson, C.C. 1968. Enzymatic breakage and joining of deoxyribonucleic acid. VI. Further purification and properties of polynucleotide ligase from Escherichia coli infected with bacteriophage T4. J. Biol. Chem. 243:4543-4555.