메뉴 건너뛰기




Volumn 8, Issue 1, 2012, Pages

Sequence divergent RXLR effectors share a structural fold conserved across plant pathogenic oomycete species

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; GENE SEQUENCE; GENETIC VARIABILITY; HYALOPERONOSPORA ARABIDOPSIDIS; NONHUMAN; OOMYCETES; PERONOSPORA; PHYLOGENETIC TREE; PHYTOPHTHORA CAPSICI; PHYTOPHTHORA INFESTANS; PLANT DISEASE; PLANT EVOLUTION; PLANT STRUCTURES; PROTEIN DOMAIN; SPECIES CONSERVATION; AMINO ACID SEQUENCE; ANIMAL; CHEMICAL STRUCTURE; CHEMISTRY; GENETICS; HOST PATHOGEN INTERACTION; METABOLISM; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PARASITOLOGY; PATHOGENICITY; PHYLOGENY; PHYSIOLOGY; PROTEIN CONFORMATION; PROTEIN FOLDING; PROTEIN MOTIF; REVIEW; SEQUENCE HOMOLOGY; STRUCTURAL HOMOLOGY;

EID: 84857479035     PISSN: 15537366     EISSN: 15537374     Source Type: Journal    
DOI: 10.1371/journal.ppat.1002400     Document Type: Article
Times cited : (126)

References (31)
  • 1
    • 78650126298 scopus 로고    scopus 로고
    • Signatures of adaptation to obligate biotrophy in the Hyaloperonospora arabidopsidis genome
    • Baxter L, Tripathy S, Ishaque N, Boot N, Cabral A, et al. (2010) Signatures of adaptation to obligate biotrophy in the Hyaloperonospora arabidopsidis genome. Science 330: 1549-1551.
    • (2010) Science , vol.330 , pp. 1549-1551
    • Baxter, L.1    Tripathy, S.2    Ishaque, N.3    Boot, N.4    Cabral, A.5
  • 2
    • 70349281388 scopus 로고    scopus 로고
    • Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans
    • Haas BJ, Kamoun S, Zody MC, Jiang RH, Handsaker RE, et al. (2009) Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature 461: 393-398.
    • (2009) Nature , vol.461 , pp. 393-398
    • Haas, B.J.1    Kamoun, S.2    Zody, M.C.3    Jiang, R.H.4    Handsaker, R.E.5
  • 3
    • 84857485053 scopus 로고    scopus 로고
    • The Genome Portal of the Department of Energy Joint Genome Institute, Phytophthora capsici genome project. Available:. Accessed 12 December 2011
    • The Genome Portal of the Department of Energy Joint Genome Institute (2011) Phytophthora capsici genome project. Available: http://genome.jgi-psf.org/Phyca11/Phyca11.home.html. Accessed 12 December 2011.
    • (2011)
  • 4
    • 78650149135 scopus 로고    scopus 로고
    • Genome evolution following host jumps in the Irish potato famine pathogen lineage
    • Raffaele S, Farrer RA, Cano LM, Studholme DJ, MacLean D, et al. (2010) Genome evolution following host jumps in the Irish potato famine pathogen lineage. Science 330: 1540-1543.
    • (2010) Science , vol.330 , pp. 1540-1543
    • Raffaele, S.1    Farrer, R.A.2    Cano, L.M.3    Studholme, D.J.4    MacLean, D.5
  • 5
    • 78650122420 scopus 로고    scopus 로고
    • Genome expansion and gene loss in powdery mildew fungi reveal tradeoffs in extreme parasitism
    • Spanu PD, Abbott JC, Amselem J, Burgis TA, Soanes DM, et al. (2010) Genome expansion and gene loss in powdery mildew fungi reveal tradeoffs in extreme parasitism. Science 330: 1543-1546.
    • (2010) Science , vol.330 , pp. 1543-1546
    • Spanu, P.D.1    Abbott, J.C.2    Amselem, J.3    Burgis, T.A.4    Soanes, D.M.5
  • 6
    • 33748329373 scopus 로고    scopus 로고
    • Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis
    • Tyler BM, Tripathy S, Zhang X, Dehal P, Jiang RH, et al. (2006) Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis. Science 313: 1261-1266.
    • (2006) Science , vol.313 , pp. 1261-1266
    • Tyler, B.M.1    Tripathy, S.2    Zhang, X.3    Dehal, P.4    Jiang, R.H.5
  • 7
    • 78650100793 scopus 로고    scopus 로고
    • Pathogenicity determinants in smut fungi revealed by genome comparison
    • Schirawski J, Mannhaupt G, Munch K, Brefort T, Schipper K, et al. (2010) Pathogenicity determinants in smut fungi revealed by genome comparison. Science 330: 1546-1548.
    • (2010) Science , vol.330 , pp. 1546-1548
    • Schirawski, J.1    Mannhaupt, G.2    Munch, K.3    Brefort, T.4    Schipper, K.5
  • 8
    • 77954763024 scopus 로고    scopus 로고
    • Plant immunity: towards an integrated view of plant-pathogen interactions
    • Dodds PN, Rathjen JP, (2010) Plant immunity: towards an integrated view of plant-pathogen interactions. Nat Rev Genet 11: 539-548.
    • (2010) Nat Rev Genet , vol.11 , pp. 539-548
    • Dodds, P.N.1    Rathjen, J.P.2
  • 9
    • 77953097908 scopus 로고    scopus 로고
    • Phytophthora infestans effector AVR3a is essential for virulence and manipulates plant immunity by stabilizing host E3 ligase CMPG1
    • Bos JI, Armstrong MR, Gilroy EM, Boevink PC, Hein I, et al. (2010) Phytophthora infestans effector AVR3a is essential for virulence and manipulates plant immunity by stabilizing host E3 ligase CMPG1. Proc Natl Acad Sci U S A 107: 9909-9914.
    • (2010) Proc Natl Acad Sci U S A , vol.107 , pp. 9909-9914
    • Bos, J.I.1    Armstrong, M.R.2    Gilroy, E.M.3    Boevink, P.C.4    Hein, I.5
  • 10
    • 0025328112 scopus 로고
    • Widespread distribution and fitness contribution of Xanthomonas campestris avirulence gene avrBs2
    • Kearney B, Staskawicz BJ, (1990) Widespread distribution and fitness contribution of Xanthomonas campestris avirulence gene avrBs2. Nature 346: 385-386.
    • (1990) Nature , vol.346 , pp. 385-386
    • Kearney, B.1    Staskawicz, B.J.2
  • 11
    • 20444369525 scopus 로고    scopus 로고
    • Two Pseudomonas syringae type III effectors inhibit RIN4-regulated basal defense in Arabidopsis
    • Kim MG, da Cunha L, McFall AJ, Belkhadir Y, DebRoy S, et al. (2005) Two Pseudomonas syringae type III effectors inhibit RIN4-regulated basal defense in Arabidopsis. Cell 121: 749-759.
    • (2005) Cell , vol.121 , pp. 749-759
    • Kim, M.G.1    da Cunha, L.2    McFall, A.J.3    Belkhadir, Y.4    DebRoy, S.5
  • 12
    • 33746002275 scopus 로고    scopus 로고
    • A bacterial virulence protein suppresses host innate immunity to cause plant disease
    • Nomura K, Debroy S, Lee YH, Pumplin N, Jones J, et al. (2006) A bacterial virulence protein suppresses host innate immunity to cause plant disease. Science 313: 220-223.
    • (2006) Science , vol.313 , pp. 220-223
    • Nomura, K.1    Debroy, S.2    Lee, Y.H.3    Pumplin, N.4    Jones, J.5
  • 13
    • 33751100626 scopus 로고    scopus 로고
    • The plant immune system
    • Jones JD, Dangl JL, (2006) The plant immune system. Nature 444: 323-329.
    • (2006) Nature , vol.444 , pp. 323-329
    • Jones, J.D.1    Dangl, J.L.2
  • 14
    • 32944479048 scopus 로고    scopus 로고
    • Host-microbe interactions: shaping the evolution of the plant immune response
    • Chisholm ST, Coaker G, Day B, Staskawicz BJ, (2006) Host-microbe interactions: shaping the evolution of the plant immune response. Cell 124: 803-814.
    • (2006) Cell , vol.124 , pp. 803-814
    • Chisholm, S.T.1    Coaker, G.2    Day, B.3    Staskawicz, B.J.4
  • 15
    • 27944450693 scopus 로고    scopus 로고
    • Differential recognition of highly divergent downy mildew avirulence gene alleles by RPP1 resistance genes from two Arabidopsis lines
    • Rehmany AP, Gordon A, Rose LE, Allen RL, Armstrong MR, et al. (2005) Differential recognition of highly divergent downy mildew avirulence gene alleles by RPP1 resistance genes from two Arabidopsis lines. Plant Cell 17: 1839-1850.
    • (2005) Plant Cell , vol.17 , pp. 1839-1850
    • Rehmany, A.P.1    Gordon, A.2    Rose, L.E.3    Allen, R.L.4    Armstrong, M.R.5
  • 16
    • 35948991117 scopus 로고    scopus 로고
    • A translocation signal for delivery of oomycete effector proteins into host plant cells
    • Whisson SC, Boevink PC, Moleleki L, Avrova AO, Morales JG, et al. (2007) A translocation signal for delivery of oomycete effector proteins into host plant cells. Nature 450: 115-118.
    • (2007) Nature , vol.450 , pp. 115-118
    • Whisson, S.C.1    Boevink, P.C.2    Moleleki, L.3    Avrova, A.O.4    Morales, J.G.5
  • 17
    • 48549097375 scopus 로고    scopus 로고
    • Conserved C-terminal motifs required for avirulence and suppression of cell death by Phytophthora sojae effector Avr1b
    • Dou D, Kale SD, Wang X, Chen Y, Wang Q, et al. (2008) Conserved C-terminal motifs required for avirulence and suppression of cell death by Phytophthora sojae effector Avr1b. Plant Cell 20: 1118-1133.
    • (2008) Plant Cell , vol.20 , pp. 1118-1133
    • Dou, D.1    Kale, S.D.2    Wang, X.3    Chen, Y.4    Wang, Q.5
  • 18
    • 77954180878 scopus 로고    scopus 로고
    • Recent developments in effector biology of filamentous plant pathogens
    • Oliva R, Win J, Raffaele S, Boutemy L, Bozkurt TO, et al. (2010) Recent developments in effector biology of filamentous plant pathogens. Cell Microbiol 12: 705-715.
    • (2010) Cell Microbiol , vol.12 , pp. 705-715
    • Oliva, R.1    Win, J.2    Raffaele, S.3    Boutemy, L.4    Bozkurt, T.O.5
  • 20
    • 42449116668 scopus 로고    scopus 로고
    • RXLR effector reservoir in two Phytophthora species is dominated by a single rapidly evolving superfamily with more than 700 members
    • Jiang RH, Tripathy S, Govers F, Tyler BM, (2008) RXLR effector reservoir in two Phytophthora species is dominated by a single rapidly evolving superfamily with more than 700 members. Proc Natl Acad Sci U S A 105: 4874-4879.
    • (2008) Proc Natl Acad Sci U S A , vol.105 , pp. 4874-4879
    • Jiang, R.H.1    Tripathy, S.2    Govers, F.3    Tyler, B.M.4
  • 21
    • 80052281811 scopus 로고    scopus 로고
    • Structures of Phytophthora RXLR effector proteins: a conserved but adaptable fold underpins functional diversity
    • Boutemy LS, King SR, Win J, Hughes RK, Clarke TA, et al. (2011) Structures of Phytophthora RXLR effector proteins: a conserved but adaptable fold underpins functional diversity. J Biol Chem 286: 35834-35842.
    • (2011) J Biol Chem , vol.286 , pp. 35834-35842
    • Boutemy, L.S.1    King, S.R.2    Win, J.3    Hughes, R.K.4    Clarke, T.A.5
  • 22
    • 80051993849 scopus 로고    scopus 로고
    • Hyaloperonospora arabidopsidis ATR1 effector is a repeat protein with distributed recognition surfaces
    • Chou S, Krasileva KV, Holton JM, Steinbrenner AD, Alber T, et al. (2011) Hyaloperonospora arabidopsidis ATR1 effector is a repeat protein with distributed recognition surfaces. Proc Natl Acad Sci U S A 108: 13323-13328.
    • (2011) Proc Natl Acad Sci U S A , vol.108 , pp. 13323-13328
    • Chou, S.1    Krasileva, K.V.2    Holton, J.M.3    Steinbrenner, A.D.4    Alber, T.5
  • 23
    • 80052302918 scopus 로고    scopus 로고
    • Phosphatidylinositol monophosphate-binding interface in the oomycete RXLR effector AVR3a is required for its stability in host cells to modulate plant immunity
    • Yaeno T, Li H, Chaparro-Garcia A, Schornack S, Koshiba S, et al. (2011) Phosphatidylinositol monophosphate-binding interface in the oomycete RXLR effector AVR3a is required for its stability in host cells to modulate plant immunity. Proc Natl Acad Sci U S A 108: 14682-14687.
    • (2011) Proc Natl Acad Sci U S A , vol.108 , pp. 14682-14687
    • Yaeno, T.1    Li, H.2    Chaparro-Garcia, A.3    Schornack, S.4    Koshiba, S.5
  • 24
    • 71349084249 scopus 로고    scopus 로고
    • The molecular clockwork of a protein-based circadian oscillator
    • Markson JS, O'Shea EK, (2009) The molecular clockwork of a protein-based circadian oscillator. FEBS Lett 583: 3938-3947.
    • (2009) FEBS Lett , vol.583 , pp. 3938-3947
    • Markson, J.S.1    O'Shea, E.K.2
  • 25
    • 13444307044 scopus 로고    scopus 로고
    • Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions
    • Krissinel E, Henrick K, (2004) Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions. Acta Crystallogr D Biol Crystallogr 60: 2256-2268.
    • (2004) Acta Crystallogr D Biol Crystallogr , vol.60 , pp. 2256-2268
    • Krissinel, E.1    Henrick, K.2
  • 26
    • 35348915452 scopus 로고    scopus 로고
    • Adaptive evolution has targeted the C-terminal domain of the RXLR effectors of plant pathogenic oomycetes
    • Win J, Morgan W, Bos J, Krasileva KV, Cano LM, et al. (2007) Adaptive evolution has targeted the C-terminal domain of the RXLR effectors of plant pathogenic oomycetes. Plant Cell 19: 2349-2369.
    • (2007) Plant Cell , vol.19 , pp. 2349-2369
    • Win, J.1    Morgan, W.2    Bos, J.3    Krasileva, K.V.4    Cano, L.M.5
  • 27
    • 84857485306 scopus 로고    scopus 로고
    • Broad Institute of Harvard and MIT, Saprolegnia parasitica sequencing project. Availalble:. Accessed 12 December 2011
    • Broad Institute of Harvard and MIT (2011) Saprolegnia parasitica sequencing project. Availalble: http://www.broadinstitute.org/annotation/genome/Saprolegnia_parasitica/MultiHome.html. Accessed 12 December 2011.
    • (2011)
  • 28
    • 79960927037 scopus 로고    scopus 로고
    • Gene gain and loss during evolution of obligate parasitism in the white rust pathogen of Arabidopsis thaliana
    • doi:10.1371/journal.pbio.1001094
    • Kemen E, Gardiner A, Schultz-Larsen T, Kemen AC, Balmuth AL, et al. (2011) Gene gain and loss during evolution of obligate parasitism in the white rust pathogen of Arabidopsis thaliana. PLoS Biol 9: e1001094 doi:10.1371/journal.pbio.1001094.
    • (2011) PLoS Biol , vol.9
    • Kemen, E.1    Gardiner, A.2    Schultz-Larsen, T.3    Kemen, A.C.4    Balmuth, A.L.5
  • 29
    • 77954417202 scopus 로고    scopus 로고
    • Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire
    • Lévesque CA, Brouwer H, Cano L, Hamilton JP, Holt C, et al. (2010) Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire. Genome Biol 11: R73.
    • (2010) Genome Biol , vol.11
    • Lévesque, C.A.1    Brouwer, H.2    Cano, L.3    Hamilton, J.P.4    Holt, C.5
  • 30
    • 84855303443 scopus 로고    scopus 로고
    • The evolutionary phylogeny of the oomycete "fungi"
    • doi:10.1007/s00709-011-0269-2, E-Pub Ahead of Print 20 March 2011
    • Beakes GW, Glockling SL, Sekimoto S, (2011) The evolutionary phylogeny of the oomycete "fungi". Protoplasma. E-pub ahead of print 20 March 2011 doi:10.1007/s00709-011-0269-2.
    • (2011) Protoplasma
    • Beakes, G.W.1    Glockling, S.L.2    Sekimoto, S.3
  • 31
    • 77955687133 scopus 로고    scopus 로고
    • Oomycete-plant coevolution: recent advances and future prospects
    • Thines M, Kamoun S, (2010) Oomycete-plant coevolution: recent advances and future prospects. Curr Opin Plant Biol 13: 427-433.
    • (2010) Curr Opin Plant Biol , vol.13 , pp. 427-433
    • Thines, M.1    Kamoun, S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.