Modes of hydrocarbon oil biosynthesis revealed by comparative gene expression analysis for race A and race B strains of Botryococcus braunii

Bioresource Technology

Volumn 109, Issue , 2012, Pages 271-276

  Ioki, Motohide ^a   Baba, Masato ^b   Bidadi, Haniyeh ^a,b   Suzuki, Iwane ^b   Shiraiwa, Yoshihiro ^b   Watanabe, Makoto M ^b   Nakajima, Nobuyoshi ^a,b  

^a NATIONAL INSTITUTE FOR ENVIRONMENTAL STUDIES   (Japan)

^b UNIVERSITY OF TSUKUBA   (Japan)

Author keywords

Alkadiene; Botryococcene; Botryococcus braunii; Gene expression; Hydrocarbon

Indexed keywords

ALKADIENE; BOTRYOCOCCENE; BOTRYOCOCCUS BRAUNII; COENZYME A; GENE EXPRESSION ANALYSIS; GENE EXPRESSION PATTERNS; GREEN ALGA; HYDROCARBON OIL; PENTOSE PHOSPHATES; REAL-TIME PCR; REPRESENTATIVE STRAIN; TRANSCRIPTOMES; TRITERPENES;

BIOCHEMISTRY; BIOSYNTHESIS; ELONGATION; GENE EXPRESSION; GLYCEROL; HYDROCARBONS; OLEFINS; ORGANIC COMPOUNDS; POLYMERASE CHAIN REACTION; UNSATURATED FATTY ACIDS;

STRAIN;

ACYL CARRIER PROTEIN; COENZYME A; FATTY ACID; GLYCEROLIPID; HYDROCARBON; MEVALONIC ACID; OIL; PENTOSE PHOSPHATE; TRANSCRIPTOME; TRITERPENE;

COMPARATIVE STUDY; FATTY ACID; GENE EXPRESSION; GREEN ALGA; HYDROCARBON; OIL; PHOTOSYNTHESIS; POLYMERASE CHAIN REACTION; PROTEIN;

ARTICLE; BIOSYNTHESIS; BOTRYOCOCCUS BRAUNII; CONTROLLED STUDY; GENE EXPRESSION; GREEN ALGA; NONHUMAN; NUCLEOTIDE SEQUENCE; PENTOSE PHOSPHATE CYCLE; PHOTOSYNTHESIS; PRIORITY JOURNAL; REAL TIME POLYMERASE CHAIN REACTION;

CHLOROPHYTA; EXPRESSED SEQUENCE TAGS; FATTY ACIDS; GENE EXPRESSION REGULATION; HYDROCARBONS; PLANT OILS; REAL-TIME POLYMERASE CHAIN REACTION; RNA, MESSENGER;

BOTRYOCOCCUS BRAUNII; CHLOROPHYTA;

EID: 84857442767     PISSN: 09608524     EISSN: 18732976     Source Type: Journal    
DOI: 10.1016/j.biortech.2011.11.078     Document Type: Article

References (12)

1. Baba M., Ioki M., Nakajima N., Shiraiwa Y., Watanabe M.M. Transcriptome analysis of an oil-rich race A strain of Botryococcus braunii (BOT-88-2) by de novo assembly of pyrosequencing cDNA reads. Bioresour. Technol. 2012, 109:282-286.
2. Banerjee A., Sharma R., Chisti Y., Banerjee U.C. Botryococcus braunii: a renewable source of hydrocarbons and other chemicals. Crit. Rev. Biotechnol. 2002, 22(3):245-279.
3. Dennis M.W., Kolattukudy P.E. Alkane biosynthesis by decarbonylation of aldehyde catalyzed by a microsomal preparation from Botryococcus braunii. Arch. Biochem. Biophys. 1991, 287(2):268-275.
4. Ershov Y.V., Gantt R.R., Cunningham F.X., Gantt E. Isoprenoid biosynthesis in Synechocystis sp. Strain PCC6803 is stimulated by compounds of the pentose phosphate cycle but not by pyruvate or deoxyxylulose-5-phosphate. J. Bacteriol. 2002, 184(18):5045-5051.
5. Ioki M., Baba M., Nakajima N., Shiraiwa Y., Watanabe M.M. Transcriptome analysis of an oil-rich race B strain of Botryococcus braunii (BOT-22) by de novo assembly of pyrosequencing cDNA reads. Bioresour. Technol. 2012, 109:292-296.
6. Ioki M., Baba M., Nakajima N., Shiraiwa Y., Watanabe M.M. Transcriptome analysis of an oil-rich race B strain of Botryococcus braunii (BOT-70) by de novo assembly of 5'-end sequences of full-length cDNA clones. Bioresour. Technol. 2012, 109:277-281.
7. Los D.A., Murata N. Structure and expression of fatty acid desaturases. Biochim. Biophys. Acta 1998, 1394:3-15.
8. Metzger P., Largeau C. Botryococcus braunii: a rich source for hydrocarbons and related ether lipids. Appl. Microbiol. Biotechnol. 2005, 66(5):486-496.
9. Niehaus T.D., Okada S., Devarenne T.P., Watt D.S., Sviripa V., Chappell J. Identification of unique mechanisms for triterpene biosynthesis in Botryococcus braunii. Proc. Natl. Acad. Sci. USA 2011, 108(30):12260-12265.
10. Okada S., Devarenne T.P., Chappell J. Molecular characterization of squalene synthase from the green microalga Botryococcus braunii, race B. Arch. Biochem. Biophys. 2000, 373(2):307-317.
11. Poliquin K., Ershov Y.V., Cunningham F.X., Woreta T.T., Gantt R.R., Gantt E. Inactivation of sll1556 in Synechocystis strain PCC 6803 impairs isoprenoid biosynthesis from pentose phosphate cycle substrates in vitro. J. Bacteriol. 2004, 186(14):4685-4693.
12. Rohmer M. The discovery of a mevalonate-independent pathway for isoprenoid biosynthesis in bacteria, algae and higher plants. Nat. Prod. Rep. 1999, 16:565-574.