Study of intermolecular contacts in the proline-rich homeodomain (PRH) - DNA complex using molecular dynamics simulations

European Biophysics Journal

Volumn 41, Issue 3, 2012, Pages 329-340

  Jalili, Seifollah ^a,b   Karami, Leila ^a  

^a K N TOOSI UNIVERSITY OF TECHNOLOGY   (Iran)

^b INSTITUTE FOR STUDIES IN THEORETICAL PHYSICS AND MATHEMATICS IPM   (Iran)

Author keywords

Hydrogen bond interactions; Interfacial waters; Molecular dynamics simulations; Proline rich homeodomain (PRH); Protein DNA binding; Specific and non specific interactions

Indexed keywords

DNA; DNA BINDING PROTEIN; WATER;

AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; CONFORMATION; HYDROGEN BOND; METABOLISM; MOLECULAR DYNAMICS; MOLECULAR GENETICS; PROLINE RICH PROTEIN DOMAIN; PROTEIN BINDING;

AMINO ACID SEQUENCE; DNA; DNA-BINDING PROTEINS; HYDROGEN BONDING; MOLECULAR DYNAMICS SIMULATION; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; PROLINE-RICH PROTEIN DOMAINS; PROTEIN BINDING; WATER;

EID: 84857362219     PISSN: 01757571     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00249-012-0790-z     Document Type: Article

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