Homeodomain-type DNA recognition

Progress in Biophysics and Molecular Biology

Volumn 66, Issue 3, 1996, Pages 211-225

  Billeter, Martin ^a  

^a ETH ZURICH   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; HOMEODOMAIN PROTEIN; WATER;

ALPHA HELIX; ANIMAL; ARTICLE; CHEMICAL STRUCTURE; CHEMISTRY; COMPARATIVE STUDY; CONFORMATION; DNA BINDING; DNA CONTENT; HOMEOBOX; METABOLISM; MOLECULAR RECOGNITION; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN DNA INTERACTION; PROTEIN DOMAIN; PROTEIN FOLDING;

ANIMALIA;

EID: 0030417483     PISSN: 00796107     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0079-6107(97)00006-0     Document Type: Review

References (49)

1. Affolter, M., Percival-Smith, A., Müller, M., Billeter, M., Qian, Y. Q., Otting, G., Wüthrich, K. and Gehring, W. J. (1991) Cell 64, 879-880.
2. Aggarwal, A. K., Rodgers, D. W., Drottar, M., Ptashne, M. and Harrison, S. (1988) Science 242, 899-907.
3. Bairoch, A. and Apweiler, R. (1996) Nucleic Acids Res. 24, 21-25.
4. Bernstein, F. C., Koetzle, T. F., Williams, G. J. B., Meyer, E. F. Jr., Brice, M. D., Rodgers, J. R., Kennard, O., Shimamouchi, T. and Tasumi, M. (1977) J. molec. Biol. 112, 535-542.
5. Billeter, M. (1995) Prog. NMR Spectr. 27, 635-645.
6. Billeter, M., Qian, Y. Q., Otting, G., Müller, M., Gehring, W. J. and Wüthrich, K. (1990) J. molec. Biol. 214, 183-197.
7. Billeter, M., Qian, Y. Q., Otting, G., Müller, M, Gehring, W. J. and Wüthrich, K. (1993) J. molec. Biol. 234, 1084-1093.
8. Billeter, M., Güntert, P., Luginbühl, P. and Wüthrich, K. (1996) Cell 85, 1057-1065.
9. Brennan, R. G. and Matthews, B. W. (1989) J. biol Chem. 264, 1903-1906.
10. Bridges, C. and Morgan, T. H. (1923) Carnegie Inst. Wash. Publ. 327, 1-251.
11. Ceska, T. A., Lamers, M., Monaci, P., Nicosia, A., Cortese, R. and Suck, D. (1993) Eur. molec. Biol. Org. J. 12, 1805-1810.
12. Cox, M., van Til̈borg, P. J., de Laat, W., Boelens, R., Van Leeuwen, H. C., van der Vliet, P. C. and Kaptein, R. (1995) J. biomolec. NMR 6, 23-32.
13. Creighton, T. E. (1993) Proteins. Freeman, New York, U.S.A.
14. Duboule, D. (ed.) (1994) Guidebook to the Homeobox Genes. Oxford University Press, Oxford, U.K.
15. Ellenberger, T. E., Brandi, C. J., Struhl, K. and Harrison, S. C. (1992) Cell 71, 1223-1237.
16. Feng, J.-A., Johnson, R. C. and Dickerson, R. E. (1994) Science 263, 348-355.
17. Gehring, W. J. (1966) Jul. Klaus Arch. 41, 44.
18. Gehring, W. J., Qian, Y. Q., Billeter, M., Furukubo-Tokunaga, K., Schier, A. F., Resendez-Perez, D., Affolter, M., Otting, G. and Wüthrich, K. (1994) Cell 78, 211-223.
19. Harrison, S. C. (1991) Nature 353, 715-719.
20. Hanes, S. D. and Brent, R. (1989) Cell 57, 1275-1283.
21. Hegde, R. S., Grossman, S. R., Laimins, L. A. and Sigler, P. B. (1992) Nature 359, 505-512.
22. Hirsch, J. A. and Aggarwal, A. K. (1995) Eur. molec. Biol. Org. J. 24, 6280-6291.
23. Kissinger, C. R., Liu, B., Martin-Blanco, E., Kornberg, T. B. and Pabo, C. O. (1990) Cell 63, 579-590.
24. Klemm, J. D., Rould, M. A., Aurora, R., Herr, W. and Pabo, C. O. (1994) Cell 77, 21-32.
25. Leiting, B., De Francesco, R., Tomei, L., Cortese, R., Otting, G. and Wüthrich, K. (1993) Eur. molec. Biol. Org. J. 12, 1797-1803.
26. Lewis, E. B. (1978) Nature 276, 565-570.
27. Levitt, M., Park, B. H. Structure 1 (1993, 223-226.
28. Li, T., Stark, M. R., Johnson, A. D. and Wolberger, C. (1995) Science 270, 262-269.
29. Luisi, B. F., Xu, W. X., Otwinowski, Z., Freedman, L. P., Yamamoto, K. R. and Sigler, P. B. (1991) Nature 352, 497-505.
30. McGinnis, W., Levine, M. S., Hafen, E., Kuroiwa, A. and Gehring, W. J. (1984) Nature 308, 428-433.
31. Morita, E. H., Shirakawa, M., Hayashi, F., Imagawa, M. and Kyogoku, Y. (1995) Prot. Sci. 4, 729-739.
32. Otting, G. and Wüthrich, K. (1989) J. Am. Chem. Soc. 111, 1871-1875.
33. Otting, G., Qian, Y. Q., Billeter, M., Müller, M., Affolter, M., Gehring, W. J. and Wüthrich, K. (1990) Eur. molec. Biol. Org. J. 9, 3085-3092.
34. Otting, G., Liepinsh, E. and Wüthrich, K. (1991) Science 254, 974-980.
35. Qian, Y. Q., Billeter, M., Otting, G., Müller, M., Gehring, W. J. and Wüthrich, K. Cell 59 (1989, 573-580.
36. Qian et al. (1992) Proc. natn. Acad. Sci. U.S.A. 89, 10,738-10,742.
37. Qian, Y. Q., Otting, G. and Wüthrich, K. (1993) J. Am. Chem. Soc. 115, 1189-1190.
38. Qian, Y. Q., Furukubo-Tokunaga, K., Müller, M., Resendez-Perez, D., Gehring, W. J. and Wüthrich, K. (1994) J. molec. Biol. 238, 333-345.
39. Pavletich, N. P. and Pabo, C. O. (1991) Science 252, 809-817.
40. Sander, C. and Schneider, R. (1991) Proteins 9, 56-68.
41. Sauer, R. T. and Harrison, S. C. (1996) Curr. Opin. struct. Biol. 6, 51-52.
42. Schott, O., Billeter, M., Leiting, B., Wider, G. and Wüthrich, K. (1997) J. molec. Biol. 267, 673-683.
43. Scott, M. P. and Weiner, A. J. (1984) Proc. natn. Acad. Sci. U.S.A. 81, 4115-4119.
44. Treisman, J., Gönczy, P., Vashishtha, M., Harris, E. and Desplan, C. (1989) Cell 59, 553-562.
45. Tsao, D. H. H., Gruschus, J. M., Wang, L.-H., Nirenberg, M. and Ferretti, J. A. (1994) Biochemistry 33, 15,053-15,060.
46. Tsao, D. H. H., Gruschus, J. M., Wang, L.-H., Nirenberg, M. and Ferretti, J. A. (1995) J. molec. Biol. 251, 297-307.
47. Wilson, D. S., Guenther, B., Desplan, C. and Kuriyan, J. (1995) Cell 82, 709-719.
48. Wolberger, C. (1996) Curr. Opin. struct. Biol. 6, 62-68.
49. Wolberger, C., Vershon, A. K., Liu, B., Johnson, A. D. and Pabo, C. O. (1991) Cell 67, 517-5281.