Habitat choice by Atlantic Salmon parr inrelation to turbulence at a reach scale

North American Journal of Fisheries Management

Volumn 29, Issue 6, 2009, Pages 1819-1830

  Enders, Eva C ^a   Roy, Mathieu L ^b   Ovidio, Michaël ^c   Hallot, Éric J ^c   Boyer, Claudine ^b   Petit, François ^c   Roy, André G ^b  

^a ALASKA FISHERIES SCIENCE CENTER   (United States)

^b UNIVERSITÉ DE MONTRÉAL   (Canada)

^c UNIVERSITY OF LIÈGE   (Belgium)

Author keywords

[No Author keywords available]

Indexed keywords

SALMO SALAR;

EID: 84857329310     PISSN: 02755947     EISSN: 15488675     Source Type: Journal    
DOI: 10.1577/M08-249.1     Document Type: Article

References (63)

1. Adams, N. S., D. W. Rondorf, S. D. Evans, J. E. Kelly, and R. W. Perry. 1998. Effects of surgically and gastrically implanted radio transmitters on growth and feeding behavior of juvenile Chinook salmon. Transactions of the American Fisheries Society 127:128-136.
2. Armstrong, J. D., P. S. Kemp, G. J. A. Kennedy, M. Ladle, and N. J. Milner. 2003. Habitat requirements of Atlantic salmon and brown trout in rivers and streams. Fisheries Research 62:143-170.
3. Biron, P. M., C. Robson, M. F. Lapointe, and S. J. Gaskin. 2004. Comparing different methods of bed shear stress estimates in simple and complex flow fields. Earth Surface Processes and Landforms 29:1403-1415.
4. Borsányi, P., K. Alfredsen, A. Harby, O. Ugedal, and C. E. Kraxner. 2004. A mesoscale habitat classification method for population modeling of Atlantic salmon (Salmo salar L.) in Norway. Hydroécologie appliquée 14:119-138.
5. Bremset, G. 2000. Seasonal and diel changes in behaviour, microhabitat use, and preferences by young pooldwelling Atlantic salmon, Salmo salar, and brown trout, Salmo trutta. Environmental Biology of Fishes 59:163-179.
6. Buffin-Bélanger, T., and A. G. Roy. 1998. Effects of a pebble cluster on the turbulent structure of a depth-limited flow in a gravel bed river. Geomorphology 25:249-267.
7. Buffin-Bélanger, T., and A. G. Roy. 2005. 1 min in the life of a river: selecting the optimal record length for the measurement of turbulence in fluvial boundary layers. Geomorphology 68:77-84.
8. Buffin-Bélanger, T., A. G. Roy, and A. D. Kirkbride. 2000. On large-scale flow structures in a gravel bed river. Geomorphology 32:417-435.
9. Chapman, D. W., and T. C. Bjornn. 1969. Distribution of salmonids in streams, with special reference to food and feeding. Pages 153-176 in T. G. Northcote, editor. Symposium on salmon and trout in streams. University of British Columbia Press, Vancouver.
10. Cotel, A. J., P. W. Webb, and H. Tritico. 2006. Do brown trout choose locations with reduced turbulence? Transactions of the American Fisheries Society 135:610-619.
11. Crowder, D. W., and P. Diplas. 2002. Vorticity and circulation: spatial metrics for evaluating flow complexity in stream habitats. Canadian Journal of Fisheries and Aquatic Sciences 59:633-645.
12. Cunjak, R. A. 1988. Behaviour and microhabitat of young Atlantic salmon (Salmo salar) during winter. Canadian Journal of Fisheries and Aquatic Sciences 45:2156-2160.
13. deGraaf, D. A., and L. H. Bain. 1986. Habitat use by and preferences of juvenile Atlantic salmon in two Newfoundland rivers. Transactions of the American Fisheries Society 115:671-681.
14. Deng, Z., G. R. Guensch, C. A. McKinstry, R. P. Mueller, D. D. Dauble, and M. C. Richmond. 2005. Evaluation of fish injury mechanisms during exposure to turbulent shear flow. Canadian Journal of Fisheries and Aquatic Sciences 62:1513-1522.
15. Enders, E. C., D. Boisclair, and A. G. Roy. 2003. The effect of turbulence on the cost of swimming for juvenile Atlantic salmon (Salmo salar). Canadian Journal of Fisheries and Aquatic Sciences 60:1149-1160.
16. Enders, E. C., T. Buffin-Bélanger, D. Boisclair, and A. G. Roy. 2005. The feeding behaviour of juvenile Atlantic salmon in relation to turbulent flow. Journal of Fish Biology 66:242-253.
17. Enders, E. C., K. D. Clarke, C. J. Pennell, L. M. N. Ollerhead, and D. A. Scruton. 2007. Comparison between PIT and radiotelemetry to evaluate winter habitat use and activity patterns of juvenile Atlantic salmon and brown trout. Hydrobiologia 582:231-242.
18. Everest, F. H., and D. W. Chapman. 1972. Habitat selection and spatial interaction by juvenile Chinook salmon and steelhead trout in two Idaho streams. Journal of the Fisheries Research Board of Canada 29:91-100.
19. Fausch, K. D. 1984. Profitable stream positions for salmonids: relating specific growth rate to net energy gain. Canadian Journal of Zoology 62:441-451.
20. Ferguson, J. W., R. F. Absolon, T. J. Carlson, and B. P. Sandford. 2006. Evidence of delayed mortality on juvenile Pacific salmon passing through turbines at Columbia River dams. Transactions of the American Fisheries Society 135:139-150.
21. Fraser, N. H. C., J. Heggenes, N. B. Metcalfe, and J. E. Thorpe. 1995. Low summer temperatures cause juvenileAtlantic salmon to become nocturnal. Canadian Journalof Zoology 73:446-451.
22. Fraser, N. H. C., N. B. Metcalfe, and J. E. Thorpe. 1993.Temperature-dependent switch between diurnal and nocturnal foraging in salmon. Proceedings of the RoyalSociety of London B 242:135-139.
23. Gowan, C., and K. D. Fausch. 2002. Why do foraging streamsalmonids move during summer? Environmental Biology of Fishes 64:139-153.
24. Gries, G., K. G. Whalen, F. Juanes, and D. L. Parrish. 1997. Nocturnal activity of juvenile Atlantic salmon (Salmo salar) in late summer: evidence of diel activity partitioning. Canadian Journal of Fisheries and AquaticSciences 54:1408-1413.
25. Guay, J. C., D. Boisclair, D. Rioux, M. Leclerc, M. Lapointe, and P. Legendre. 2000. Development and validation ofnumerical habitat models for juveniles of Atlantic salmon (Salmo salar). Canadian Journal of Fisheries and Aquatic Sciences 57:2065-2075.
26. Guensch, G. R., T. B. Hardy, and R. C. Addley. 2001 Examining feeding strategies and position choice of driftfeeding salmonids using an individual-based, mechanistic foraging model. Canadian Journal of Fisheries and Aquatic Sciences 58:446-457.
27. Heggenes, J. 1990. Habitat utilization and preferences in juvenile Atlantic salmon (Salmo salar) in streams. Regulated Rivers: Research and Management 5:341-354.
28. Heggenes, J. 2002. Flexible summer habitat selection by wild, allopatric brown trout in lotic environments. Transactions of the American Fisheries Society 131:287-298.
29. Higgins, P. J., and C. Talbot. 1985. Growth and feeding in juvenile Atlantic salmon (Salmo salar L.). Pages 243-263 in C. B. Coey, A. M. Mackie, and J. G. Bell, editors. Nutrition and feeding in fish. Academic Press, London.
30. Hughes, N. F., and L. M. Dill. 1990. Position choice by driftfeeding salmonids: model and test for Arctic grayling (Thymallus arcticus) in subarctic mountain streams, interior Alaska. Canadian Journal of Fisheries and Aquatic Sciences 47:2039-2048.
31. Johnston, P., N. E. Bergeron, and J. J. Dodson. 2004. Diel activity patterns of juvenile Atlantic salmon in rivers withsummer water temperature near the temperature-dependent suppression of diurnal activity. Journal of Fish Biology 65:1305-1318.
32. Keenleyside, M. H. A., and F. T. Yamamoto. 1961. Territorial behaviour of juvenile Atlantic salmon (Salmo salar L.). Behaviour 19:139-169.
33. Kemp, P. S., D. J. Gilvear, and J. D. Armstrong. 2006.Variation in performance reveals discharge-related energy costs for foraging Atlantic salmon (Salmo salar) parr. Ecology of Freshwater Fish 15:565-571.
34. Lacey, R. W. J., and A. G. Roy. 2007. A comparative study of the turbulent flow field with and without a pebble cluster in a gravel bed river. Water Resources Research 43:W05502.
35. Lamarre, H., and A. G. Roy. 2005. Reach-scale variability of turbulent flow characteristics in a gravel bed river. Geomorphology 68:95-113.
36. Lamouroux, N., and Y. Souchon. 2002. Simple predictions of instream habitat model outputs for fish habitat guilds in large streams. Freshwater Biology 47:1531-1542.
37. Lane, S. N., P. M. Biron, K. F. Bradbrook, J. B. Butler, J. H. Chandler, M. D. Crowell, S. J. McLelland, K. S. Richards, and A. G. Roy. 1998. Three-dimensional measurements of river channel flow processes using acoustic Doppler velocimetry. Earth Surface Processes and Landforms 23:1247-1267.
38. Legleiter, C. J., T. L. Phelps, and E. E. Wohl. 2007. Geostatistical analysis of the effects of stage and roughness on reach-scale spatial patterns of velocity and turbulence intensity. Geomorphology 83:322-345.
39. Liao, J. C., D. N. Beal, G. V. Lauder, and M. S. Triantafyllou. 2003. Fish exploiting vortices decrease muscle activity. Science 302:1566-1569.
40. MacLean, A., F. A. Huntingford, G. D. Ruxton, I. J. Morgan, J. Hamilton, and J. D. Armstrong. 2005. Testing the assumptions of the ideal despotic distribution with an unpredictable food supply: experiments in juvenile salmon. Journal of Animal Ecology 74:214-225.
41. McLaughlin, R. L., and J. W. A. Grant. 1994. Morphological and behavioural differences among recently emergedbrook charr, Salvelinus fontinalis, foraging in slow- vs. fast-running water. Environmental Biology of Fishes 39:289-300.
42. Moir, H. J., C. N. Gibbins, C. Soulsby, and J. H. Webb. 2006. Discharge and hydraulic interactions in contrasting channel morphologies and their influence on site utilization by spawning Atlantic salmon (Salmo salar). Canadian Journal of Fisheries and Aquatic Sciences 63:2567-2585.
43. Morantz, D. L., R. K. Sweeney, C. S. Shirvell, and D. A. Longard. 1987. Selection of microhabitat in summer by juvenile Atlantic salmon (Salmo salar). Canadian Journal of Fisheries and Aquatic Sciences 44:120-129.
44. Morinville, G. R., and J. B. Rasmussen. 2003. Early juven ile bioenergetic differences between anadromous and brook trout (Salvelinus fontinalis). Canadian Journal of Fisheries and Aquatic Sciences 60:401-410.
45. Murchie, K. J., S. J. Cooke, and J. F. Schreer. 2004. Effects of radio transmitter antenna length on swimming performance of juvenile rainbow trout. Ecology of Freshwater Fish 13:312-316.
46. Neitzel, D. A., D. D. Dauble, G. F. Čada, M. C. Richmond, G. R. Guensch, R. P. Mueller, C. S. Abernethy, and B. Amidan. 2004. Survival estimates for juvenile fish subjected to a laboratory-generated shear environment. Transactions of the American Fisheries Society 133:447-454.
47. Nislow, K. H., C. L. Folt, and D. L. Parrish. 1999. Favorable foraging locations for young Atlantic salmon: application to habitat and population restoration. Ecological Applications 9:1085-1099.
48. Odeh, M., J. F. Noreika, A. Haro, A. Maynard, T. Castro-Santos, and G. F. Čada. 2002. Evaluation of the effects of turbulence on the behavior of migratory fish. Report to the Bonneville Power Administration, Contract 00000022, Project 200005700, Portland, Oregon.
49. Økland, F., E. B. Thorstad, and T. F. Næsje. 2004. Is Atlantic salmon production limited by number of territories? Journal of Fish Biology 65:1047-1055.
50. Orpwood, J. E., S. W. Griffiths, and J. D. Armstrong. 2006. Effects of food availability on temporal activity patterns and growth of Atlantic salmon. Journal of Animal Ecology 75:677-685.
51. Ovidio, M., E. C. Enders, E. J. Hallot, M. L. Roy, J. C. Philippart, F. Petit, and A. G. Roy. 2007. Mobility andhome-range use of Atlantic salmon parr over short time scales. Aquatic Living Resources 20:95-101.
52. Pavlov, D. S., A. I. Lupandin, and M. A. Skorobogatov. 2000. The effects of flow turbulence on the behavior anddistribution of fish. Journal of Ichthyology 40(Supplement 2):S232-S261.
53. Railsback, S. F., R. H. Lamberson, B. C. Harvey, and W. E. Duffy. 1999. Movement rules for individual-based models of stream fish. Ecological Modelling 123:73-89.
54. Rimmer, D. M., U. Paim, and R. L. Saunders. 1983. Autumnal habitat shift of juvenile Atlantic salmon (Salmo salar) in a small river. Canadian Journal of Fisheries and Aquatic Sciences 40:671-680.
55. Robertson, M. J., D. A. Scruton, and J. A. Brown. 2003. Effects of surgically implanted transmitters on swimming performance, food consumption, and growth of wild Atlantic salmon parr. Journal of Fish Biology 62:673-678.
56. Roy, A. G., T. Buffin-Bélanger, H. Lamarre, and A. D. Kirkbride. 2004. Size, shape, and dynamics of large-scale turbulent flow structures in a gravel bed river. Journal of Fluid Mechanics 500:1-27.
57. Roy, M. L., A. G. Roy, and P. Legendre. 2009. The relations between "standard" fluvial habitat variables and turbulent flow at multiple scales in morphological units of a gravel bed river. River Research and Applications. DOI: 10.1002/rra.1281.
58. Roy, A. G., T. Buffin-Bélanger, and S. Deland. 1996. Scales of turbulent coherent flow structures in a gravel bed river. Pages 147-164 in P. J. Ashworth, S. J. Bennett, J. L. Best, and S. J. Mclelland, editors. Coherent flow structures in open channels. Wiley, Chichester, UK.
59. Smith, D. L. 2003. The shear flow environment of juvenile salmonids. University of Idaho, Moscow.
60. Smith, D. L., and E. L. Brannon. 2007. Influence of cover on mean column hydraulic characteristics in small pool- riffle morphology streams. River Research and Applications 23:125-139.
61. Smith, D. L., E. L. Brannon, and M. Odeh. 2005. Response of juvenile rainbow trout to turbulence produced by prismatoidal shapes. Transactions of the American Fisheries Society 134:741-753.
62. Smith, D. L., E. L. Brannon, B. Shafii, and M. Odeh. 2006. Use of the average and fluctuating velocity components for estimation of volitional rainbow trout density. Transactions of the American Fisheries Society 135:431-441.
63. Valdimarsson, S. K., N. B. Metcalfe, J. E. Thorpe, and F. A. Huntingford. 1997. Seasonal changes in sheltering: effect of light and temperature on diel activity in juvenile salmon. Animal Behaviour 54:1405-1412.