Dynamics and multiple stable binding modes of DNA intercalators revealed by single-molecule force spectroscopy

Angewandte Chemie - International Edition

Volumn 51, Issue 8, 2012, Pages 1811-1815

  Paik, D Hern ^a   Perkins, Thomas T ^a  

^a UNIVERSITY OF COLORADO   (United States)

Author keywords

DNA; force spectroscopy; intercalations; optical traps; single molecule studies

Indexed keywords

BINDING MODES; DIFFERENT TIME SCALE; DNA INTERCALATIONS; FORCE SPECTROSCOPY; INTERCALATION/DEINTERCALATION; INTERCALATORS; OPTICAL TRAP; SINGLE MOLECULE FORCE SPECTROSCOPY; SINGLE-MOLECULE STUDIES; SOLUTION BINDING;

BINDING ENERGY; INTERCALATION; MOLECULES;

DNA;

EID: 84856930773     PISSN: 14337851     EISSN: 15213773     Source Type: Journal    
DOI: 10.1002/anie.201105540     Document Type: Article

References (19)

1. A. N. Glazer, H. S. Rye, Nature 1992, 359, 859.
2. L. H. Hurley, Nat. Rev. Cancer 2002, 2, 188.
3. J. Dai, C. Punchihewa, P. Mistry, A. T. Ooi, D. Yang, J. Biol. Chem. 2004, 279, 46096
4. E. J. Fechter, B. Olenyuk, P. B. Dervan, Angew. Chem. 2004, 116, 3675
5. Angew. Chem. Int. Ed. 2004, 43, 3591.
6. S. B. Smith, L. Finzi, C. Bustamante, Science 1992, 258, 1122.
7. R. Krautbauer, S. Fischerlander, S. Allen, H. E. Gaub, Single Mol. 2002, 3, 97
8. I. D. Vladescu, M. J. McCauley, I. Rouzina, M. C. Williams, Phys. Rev. Lett. 2005, 95, 158102.
9. R. Eckel, R. Ros, A. Ros, S. D. Wilking, N. Sewald, D. Anselmetti, Biophys. J. 2003, 85, 1968
10. A. Sischka, K. Toensing, R. Eckel, S. D. Wilking, N. Sewald, R. Ros, D. Anselmetti, Biophys. J. 2005, 88, 404.
11. M. L. Bennink, O. D. Scharer, R. Kanaar, K. Sakata-Sogawa, J. M. Schins, J. S. Kanger, B. G. de Grooth, J. Greve, Cytometry 1999, 36, 200
12. C. U. Murade, V. Subramaniam, C. Otto, M. L. Bennink, Biophys. J. 2009, 97, 835
13. K. Gunther, M. Mertig, R. Seidel, Nucleic Acids Res. 2010, 38, 6526.
14. H. S. Rye, S. Yue, D. E. Wemmer, M. A. Quesada, R. P. Haugland, R. A. Mathies, A. N. Glazer, Nucleic Acids Res. 1992, 20, 2803.
15. T. T. Perkins, S. R. Quake, D. E. Smith, S. Chu, Science 1994, 264, 822.
16. A. Larsson, C. Carlsson, M. Jonsson, B. Albinsson, J. Am. Chem. Soc. 1994, 116, 8459.
17. I. D. Vladescu, M. J. McCauley, M. E. Nunez, I. Rouzina, M. C. Williams, Nat. Methods 2007, 4, 517.
18. M. D. Wang, H. Yin, R. Landick, J. Gelles, S. M. Block, Biophys. J. 1997, 72, 1335.
19. T. T. Perkins, D. E. Smith, S. Chu, Science 1994, 264, 819.