메뉴 건너뛰기




Volumn 40, Issue 3, 2012, Pages 10571-10572

Erratum: GeoPCA: A new tool for multivariate analysis of dihedral angles based on principal component geodesics (Nucleic Acids Research (2012) 40:3 (e25) DOI:10.1093/nar/gkr1069));GeoPCA: A new tool for multivariate analysis of dihedral angles based on principal component geodesics

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; AUTOMATION; CLUSTER ANALYSIS; CONFORMATION; DIHEDRAL ANGLE; INFORMATION PROCESSING; MATHEMATICAL COMPUTING; MULTIVARIATE ANALYSIS; PRINCIPAL COMPONENT ANALYSIS; PRINCIPAL COMPONENT GEODESICS; PRIORITY JOURNAL; STRUCTURE ANALYSIS;

EID: 84856833177     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkv1000     Document Type: Erratum
Times cited : (20)

References (20)
  • 2
    • 10844292652 scopus 로고    scopus 로고
    • Energy landscape of a small peptide revealed by dihedral angle principal component analysis
    • Mu, Y., Nguyen, P. H. and Stock, G. (2005) Energy landscape of a small peptide revealed by dihedral angle principal component analysis. PROTEINS: Structure, Function, and Bioinformatics, 58, 45-52.
    • (2005) PROTEINS: Structure, Function, and Bioinformatics , vol.58 , pp. 45-52
    • Mu, Y.1    Nguyen, P.H.2    Stock, G.3
  • 3
    • 61449106774 scopus 로고    scopus 로고
    • Principal component analysis of native ensembles of biomolecular structures (PCA NEST): Insights into functional dynamics
    • Yang, L. W., Eyal, E., Bahar, I. and Kitao, A. (2009) Principal component analysis of native ensembles of biomolecular structures (PCA NEST): insights into functional dynamics. Bioinformatics, 25, 606-614.
    • (2009) Bioinformatics , vol.25 , pp. 606-614
    • Yang, L.W.1    Eyal, E.2    Bahar, I.3    Kitao, A.4
  • 4
    • 0026076090 scopus 로고
    • Collective motions in proteins: A covariance analysis of atomic Fuctuations in molecular dynamics and normal mode simulations
    • Ichiye, T. and Karplus, M. (1991) Collective motions in proteins: a covariance analysis of atomic Fuctuations in molecular dynamics and normal mode simulations. Proteins, 11, 205-271.
    • (1991) Proteins , vol.11 , pp. 205-271
    • Ichiye, T.1    Karplus, M.2
  • 5
    • 25844431698 scopus 로고    scopus 로고
    • Coarse-grained normal mode analysis in structural biology
    • Bahar, I. and Rader, A. (2005) Coarse-grained normal mode analysis in structural biology. Curr. Opin. Struct. Biol., 15, 586-592.
    • (2005) Curr. Opin. Struct. Biol , vol.15 , pp. 586-592
    • Bahar, I.1    Rader, A.2
  • 6
    • 34547297406 scopus 로고    scopus 로고
    • Dihedral angle principal component analysis of molecular dynamics simulations
    • Altis, A., Nguyen, P. H., Hegger, R. and Stock, G. (2007) Dihedral angle principal component analysis of molecular dynamics simulations. J. Chem. Phys., 126, 244111.
    • (2007) J. Chem. Phys , vol.126 , pp. 244111
    • Altis, A.1    Nguyen, P.H.2    Hegger, R.3    Stock, G.4
  • 7
    • 33746218824 scopus 로고    scopus 로고
    • Comment on: Energy landscape of a small peptide revealed by dihedral angle principal component analysis
    • Hinsen, K. (2006) Comment on: energy landscape of a small peptide revealed by dihedral angle principal component analysis. Proteins, 64, 795-797.
    • (2006) Proteins , vol.64 , pp. 795-797
    • Hinsen, K.1
  • 8
    • 33746268436 scopus 로고    scopus 로고
    • Reply to the comment on Energy landscape of a small peptide revealed by dihedral angle principal component analysis
    • Mu, Y., Nguyen, P. and Stock, G. (2006) Reply to the comment on Energy landscape of a small peptide revealed by dihedral angle principal component analysis. Proteins, 64, 798-799.
    • (2006) Proteins , vol.64 , pp. 798-799
    • Mu, Y.1    Nguyen, P.2    Stock, G.3
  • 11
    • 0035972801 scopus 로고    scopus 로고
    • Circular effects in representations of an RNA nucleotides data set in relation with principal components analysis
    • Reijmers, T. H., Wehrens, R. and Buydens, L. M. C. (2001) Circular effects in representations of an RNA nucleotides data set in relation with principal components analysis. Chemometrics and Intelligent Laboratory Systems, 56, 61-71.
    • (2001) Chemometrics and Intelligent Laboratory Systems , vol.56 , pp. 61-71
    • Reijmers, T.H.1    Wehrens, R.2    Buydens, L.M.C.3
  • 14
    • 84956689194 scopus 로고    scopus 로고
    • Kernel principal component analysis. Artificial Neural Networks-ICANN'97
    • Schölkopf, B., Smola, A. and Müller, K.-R. (1997) Kernel principal component analysis. Artificial Neural Networks-ICANN'97, Lecture Notes in Computer Science, 1327, 583-588.
    • (1997) Lecture Notes in Computer Science , vol.1327 , pp. 583-588
    • Schölkopf, B.1    Smola, A.2    Müller, K.-R.3
  • 15
    • 0034704229 scopus 로고    scopus 로고
    • A global geometric framework for nonlinear dimensionality reduction
    • Tenenbaum, J. B., de Silva, V. and Langford, J. C. (2000) A global geometric framework for nonlinear dimensionality reduction. Science, 290, 2319-2323.
    • (2000) Science , vol.290 , pp. 2319-2323
    • Tenenbaum, J.B.1    De Silva, V.2    Langford, J.C.3
  • 16
    • 19644394100 scopus 로고    scopus 로고
    • Geometric diffusions as a tool for harmonic analysis and structure definition of data: Diffusion maps
    • Coifman, R. R., Lafon, S., Lee, A. B., Maggioni, M., Nadler, B., Warner, F. and Zucker, S. W. (2005) Geometric diffusions as a tool for harmonic analysis and structure definition of data: diffusion maps. Proc. Natl Acad. Sci. USA, 102, 7426-7431.
    • (2005) Proc. Natl Acad. Sci. USA , vol.102 , pp. 7426-7431
    • Coifman, R.R.1    Lafon, S.2    Lee, A.B.3    Maggioni, M.4    Nadler, B.5    Warner, F.6    Zucker, S.W.7
  • 17
    • 33745954917 scopus 로고    scopus 로고
    • Principal component analysis for Riemannian manifolds, with an application to triangular shape spaces
    • Huckemann, S. and Ziezold, H. (2006) Principal component analysis for Riemannian manifolds, with an application to triangular shape spaces. Adv. Appl. Prob., 38, 299-319.
    • (2006) Adv. Appl. Prob , vol.38 , pp. 299-319
    • Huckemann, S.1    Ziezold, H.2
  • 18
    • 0032545158 scopus 로고    scopus 로고
    • Stepping through an RNA structure: A novel approach to conformational analysis
    • Duarte, C. M. and Pyle, A. M. (1998) Stepping through an RNA structure: a novel approach to conformational analysis. J. Mol. Biol., 284, 1465-1478.
    • (1998) J. Mol. Biol , vol.284 , pp. 1465-1478
    • Duarte, C.M.1    Pyle, A.M.2
  • 19
    • 34548401692 scopus 로고    scopus 로고
    • Evaluating and learning from RNA pseudotorsional space: Quantitative validation of a reduced representation for RNA Structure
    • Wadley, L. M., Keating, K. S., Duarte, C. M. and Pyle, A. M. (2007) Evaluating and learning from RNA pseudotorsional space: quantitative validation of a reduced representation for RNA Structure. J. Mol. Biol., 372, 942-957.
    • (2007) J. Mol. Biol , vol.372 , pp. 942-957
    • Wadley, L.M.1    Keating, K.S.2    Duarte, C.M.3    Pyle, A.M.4
  • 20
    • 0002702476 scopus 로고
    • The imbedding problem for Riemannian manifolds
    • Nash, J. (1956) The imbedding problem for Riemannian manifolds. Ann. Math., 63, 20-63.
    • (1956) Ann. Math , vol.63 , pp. 20-63
    • Nash, J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.