Genetic variability of Chalara fraxinea, dieback cause of European ash (Fraxinus excelsior L.)

Mycological Progress

Volumn 11, Issue 1, 2012, Pages 37-45

  Kraj, Wojciech ^a   Zarek, Marcin ^a   Kowalski, Tadeusz ^a  

^a UNIVERSITY OF AGRICULTURE IN KRAKOW   (Poland)

Author keywords

Chalara fraxinea; Genetic variability; Population genetics; RAMS markers; Tree diseases

Indexed keywords

CHALARA; FRAXINUS; FRAXINUS EXCELSIOR;

EID: 84856432619     PISSN: 1617416X     EISSN: 18618952     Source Type: Journal    
DOI: 10.1007/s11557-010-0724-z     Document Type: Article

References (56)

1. Bakys R, Vasaitis R, Barklund P, Ihrmark K, Stenlid J (2009a) Investigations concerning the role of Chalara fraxinea in declining Fraxinus excelsior. Plant Pathol 58: 284-292.
2. Bakys R, Vasaitis R, Barklund P, Thomsen IM, Stenlid J (2009b) Occurrence and pathogenicity of fungi in necrotic and non-symptomatic shoots of declining common ash (Fraxinus excelsior) in Sweden. Eur J For Res 128: 51-60.
3. Baric L, Diminic D (2009) First report of the pathogenic fungus Chalara fraxinea Kowalski on common ash (Fraxinus excelsior L.) in Gorski Kotar. Glas biljn zašt 10: 33.
4. Barklund P (2006) Okänd svamp bakom askskottsjukan. Värsta farsoten som drabbat en enskild trädart (Unknow fungus causes dieback of ash shoots). SkogsEko 3: 10-11.
5. Burdon JJ, Roelfs AP (1985) The effect of sexual and asexual reproduction on the isozyme structure of population Puccinia graminis. Phytopathology 75: 1068-1073.
6. Carlson JE, Tulsieram LK, Glaubitz JC, Luk VWK, Kauffeldt C, Rutledge R (1991) Segregation of random amplified DNA markers in F1 progeny of conifers. Theor Appl Genet 83: 194-200.
7. Desmazières JB (1851) Peziza (Phialea cyathoidea) albida. Ann Sci Nat, Bot Ser 3, Tome 16, 823-824.
8. Drummond AJ, Ashton B, Buxton S, Cheung M, Cooper A, Heled J, Kearse M, Moir R, Stones-Havas S, Sturrock S, Thierer T, Wilson A (2010) Geneious v5.1.
9. Ellis MB, Ellis JP (1997) Microfungi on land plants. An identification handbook. Richmond Slough.
10. Engesser R, Queloz V, Meier F, Kowalski T, Holdenrieder O (2009) Das Triebsterben der Esche in der Schweiz. Wald und Holz 6: 24-27.
11. Grünig CR, Sieber TN, Holdenrieder O (2001) Characterization of dark septate endophytic fungi (DSE) using inter-simple-sequence repeat-anchored polymerase chain reaction (ISSR-PCR) amplification. Mycol Res 105: 24-32.
12. Halmschlager E, Kirisits T (2008) First report of Chalara fraxinea on Fraxinus excelsior in Austria. New Dis Rep 17: 20. [http://www.ndrs.org.uk/article.php?file=2008-25.asp].
13. Hantula J, Dusabenyagasani M, Hamelin RC (1996) Random amplified microsatellites (RAMS) - a novel method for characterizing genetic variation within fungi. Eur J For Pathol 26: 159-166.
14. Hedrick PW (2000) Genetics of populations, 2nd edn. Jones and Bartlet, Boston, MA.
15. Huber L, Gillespie TJ (1992) Modeling leaf wetness in relation to plant disease epidemiology. Annu Rev Phytopathol 30: 553-577.
16. Huff DR, Peakall R, Smouse PE (1993) RAPD variation within and among natural populations of outcrossing buffalograss Buchloe dactyloides (Nutt) Engelm. Theor Appl Genet 86: 927-934.
17. Ioos R, Kowalski T, Husson C, Holdenrieder O (2009) Rapid in planta detection of Chalara fraxinea by a real - time PCR assay using a dual-labelled probe. Eur J Plant Pathol 125: 329-335.
18. James TY, Porter D, Hamrick JL, Vilgalys R (1999) Evidence for limited intercontinental gene flow in the cosmopolitan mushroom, Schizophyllum commune. Evolution 53: 1665-1667.
19. Jankovsky L, Holdenrieder O (2009) Chalara fraxinea - ash dieback in the Czech Republic. Plant Prot Sci 45: 74-78.
20. Kirisits T, Halmschlager E (2008) Eschenpilz nachgewiesen. Forstztg 119: 32-33.
21. Kirisits T, Matlakova M, Mottinger-Kroupa S, Cech T, Halmschlager E (2009) The current situation of ash dieback caused by Chalara fraxinea in Austria. In: Doǧmuş-Lehtijärvi T (ed) Proceedings of the conference of IUFRO working party 7.02.02, Eǧirdir, Turkey, 11-16 May 2009. SDU Faculty of Forestry Journal, Serial: A, Special Issue: pp 97-119.
22. Kowalski T (2001) O zamieraniu jesionów [About ash dieback]. Trybuna Leśnika 4: 6-7.
23. Kowalski T (2006) Chalara fraxinea sp. nov. associated with dieback of ash (Fraxinus excelsior) in Poland. For Pathol 36: 264-270.
24. Kowalski T (2007) Chalara fraxinea - new described fungus species on dying ash in Poland. Sylwan 4: 44-48.
25. Kowalski T (2009) Rozprzestrzenienie grzyba Chalara fraxinea w aspekcie procesu chorobowego jesionu w Polsce (Expanse of Chalara fraxinea fungus in terms of ash dieback in Poland). Sylwan 10: 668-674.
26. Kowalski T, Bartnik C (2010) Morphological variation in colonies of Chalara fraxinea isolated from ash stems with symptoms of dieback and effects of temperature on colony growth and structure. Acta Agrobot 63: 99-106.
27. Kowalski T, Holdenrieder O (2008) Eine neue Pilzkrankheit an Esche in Europa. Schweiz Z Forstwes 159: 45-50.
28. Kowalski T, Holdenrieder O (2009a) Pathogenicity of Chalara fraxinea. For Pathol 39: 1-7.
29. Kowalski T, Holdenrieder O (2009b) The teleomorph of Chalara fraxinea, the causal agent of ash dieback. For Pathol 39: 304-308.
30. Kowalski T, Łukomska A (2005) Badania nad zamieraniem jesionu (Fraxinus excelsior L.) w drzewostanach Nadleśnictwa Włoszczowa (Study on ash dying in the Włoszczowa Forest Unit stands). Acta Agrobot 59: 429-440.
31. Kraj W (2009) Differentiation and genetic structure of Sclerophoma pythiophila strains on Pinus sylvestris in Poland. J Phytopathol 157: 400-406.
32. Kraj W, Kowalski T (2008) Genetic variation in Polish strains of Gremmeniella abietina. For Pathol 38: 203-217.
33. Lewontin RC (1972) The apportionment of human diversity. Evol Biol 6: 381-394.
34. Lygis V, Vasiliauskas R, Larsson K, Stenlid J (2005) Wood-inhabiting fungi in stems of Fraxinus excelsior in declining ash stands of northern Lithuania, with particular reference to Armillaria cepistipes. Scand J For Res 20: 337-346.
35. McDonald BA (2004) Population Genetics of Plant Pathogens. Plant Health Instructor. doi: 10. 1094/PHI-A-2004-0524-01.
36. Nei M (1972) Genetic distance between populations. Am Nat 106: 283-392.
37. Ogris N, Hauptman T, Jurc D, Floreancig V, Marsich F, Montecchio L (2010) First report of Chalara fraxinea on common ash in Italy. Plant Dis 94: 133.
38. Olrik DC, Kjaer ED, Ditlevsen B (2007) Clonal differences in attacks by ash shoot dieback. Skoven 39: 522-525.
39. Peakall R, Smouse PE (2006) GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Notes 6: 288-295.
40. Przybył K (2002) Fungi associated with necrotic apical parts of Fraxinus excelsior shoots. For Pathol 32: 387-394.
41. Queloz V, Grünig CR, Berndt R, Kowalski T, Sieber TN, Holdenrieder O (2010) Cryptic speciation in Hymenoscyphus albidus. For Pathol 40 (in press). doi: 10. 1111/j. 1439-0329. 2010. 00645. x.
42. Rytkönen A, Lilja A, Drenkhan R, Gaitnieks T, Hantula J (2010) First record of Chalara fraxinea in Finland and genetic variation among isolates sampled from Ǻland, mainland Finland Estonia and Latvia. For Pathol. doi: 10. 1111/j. 1439-0329. 2010. 00647. x.
43. Schumacher J, Heydeck P, Leonhard S, Wulf A (2007a) Neuartige Schaeden an Eschen. Allg Forst Z - Der Wald 62, 20: 1094-1096.
44. Schumacher J, Wulf A, Leonhard S (2007b) Erster Nachweis von Chalara fraxinea T. Kowalski sp. nov., in Deutschland - ein Verursacher neuartiger Schaeden an Eschen. Nachr Deutsch Pflanzenschutzd 59: 121-123.
45. Shannon CE, Weaver W (1949) The mathematical theory of communication. University of Illinois Press, Urbana.
46. Skovsgaard JP, Thomsen IM, Skovgaard IM, Martinussen T (2010) Associations between symptoms of dieback in even-aged stands of ash (Fraxinus excelsior L.). For Pathol 40: 7-18.
47. Szabo I (2008) First report of Chalara fraxinea affecting common ash in Hungary. New Dis Rep 18: 30 [http://www.ndrs.org.uk/article.php?id=018030].
48. Talgo V, Sletten A, Brurberg MB, Solheim H, Stensvand A (2009) Chalara fraxinea isolated from diseased ash in Norway. Plant Dis 93: 548.
49. Thomsen IM, Skovsgaard JP, Barklund P, Vasaitis R (2007) Svampesygdom er arsag til toptorre i ask. [Fungal disease is the cause of ash dieback]. Skoven 39: 234-236.
50. Uotila A, Kurkela T, Tuomivirta T, Hantula J, Kaitera J (2006) Gremmeniella abietina types cannot be distinguished using ascospore morphology. For Pathol 36: 395-405.
51. Wang X, Ennos RA, Szmidt AE, Hansson P (1997) Genetic variability in the canker pathogen fungus, Gremmeniella abietina. 2. Fine-scale investigation of the population genetic structure. Can J Bot 75: 1460-1469.
52. White TJ, Bruns TD, Lee S, Taylor J, (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR Protocols: A Guide to Methods and Applications. Academic, New York, pp 315-322.
53. Vainio EJ, Hantula J (1999) Variation of RAMS markers within the intersterility groups of Heterobasidion annosum in Europe. Eur J For Pathol 29: 231-246.
54. Vasiliauskas R, Bakys R, Lygis V, Ihrmark K, Barklund P, Stenlid J (2006) Fungi associated with the decline of Fraxinus excelsior in the Baltic States and Sweden. In: Oszako T, Woodward S (eds) Possible limitation of decline phenomena in broadleaved stands. Forest Research Institute, Warsaw, pp 45-53.
55. Yeh FC, Yang RC, Boyle TBJ, Ye ZH, Mao JX (1997) POPGENE. Molecular Biology and Biotechnology Center, University of Alberta, Canada, The User Friendly Software for Population Genetic Analysis.
56. Zietkiewicz E, Rafalski A, Labuda D (1994) Genome fingerprinting by simple sequence repeat (SSR) anchored polymerase chain reaction amplification. Genomics 20: 176-183.