Evidence for limited intercontinental gene flow in the cosmopolitan mushroom, Schizophyllum commune

Evolution

Volumn 53, Issue 6, 1999, Pages 1665-1677

  James, Timothy Y ^a,b   Porter, David ^a   Hamrick, James L ^a   Vilgalys, Rytas ^b  

^a UNIVERSITY OF GEORGIA   (United States)

^b DUKE UNIVERSITY   (United States)

Author keywords

Allozymes; Cosmopolitan mushrooms; Gene flow; Mating alleles

Indexed keywords

CLUSTER ANALYSIS; GENE FLOW; GENETIC STRUCTURE; GENETIC VARIATION; POPULATION GENETICS; ZOOGEOGRAPHY;

SCHIZOPHYLLUM COMMUNE;

EID: 0033403638     PISSN: 00143820     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1558-5646.1999.tb04552.x     Document Type: Article

References (96)

1. Babbel, G. R., and R. K. Selander. 1974. Genetic variability in edaphically restricted and widespread plant species. Evolution 28:619-630.
2. Barr, D. J. S., S. I. Warwick, and N. L. Désaulniers. 1996. Isozyme variation, morphology, and growth response to temperature in Pythium ultimum. Can. J. Bot. 74:753-761.
3. Bartholomew, K. A., A. L. Marion, C. P. Novotny, and R. C. Ullrich. 1996. A case study in fungal development and genetics. Pp. 371-384 in C. J. Bos, ed. Fungal genetics: principles and practice. Marcel Dekker, New York.
4. Bisby, G. R. 1943. Geographical distribution of fungi. Bot. Rev. 9:466-482.
5. Boisselier-Dubayle, M. C., J. Perreau-Bertrand, and J. Lambourdiere. 1996. Genetic variation in wild populations of Mycena rosea. Mycol. Res. 100:753-758.
6. Brasier, C. M. 1970. Variation in a natural population of Schizophyllum commune. Am. Nat. 104:191-205.
7. Bresinsky, A., M. Fischer, B. Meixner, and W. Paulus. 1987. Speciation in Pleurotus. Mycologia 79:234-245.
8. Brown, J. K. M., A. C. Jessop, and H. N. Rezanoor. 1991. Genetic uniformity in barley and its powdery mildew pathogen. Proc. R. Soc. Lond. B Biol. Sci. 246:83-90.
9. Burdon, J. J., D. R. Marshall, N. H. Luig, and D. J. S. Gow. 1982. Isozyme studies on the origin and evolution of Puccinia graminis f. sp. tritici in Australia. Aust. J.Biol. Sci. 36:403-410.
10. Carlier, J., M. H. Lebrun, M. F. Zapater, C. Dubois, and X. Mourichon. 1996. Genetic structure of the global population of banana black leaf streak fungus, Mycosphaerella fijiensis. Mol. Ecol. 5:499-510.
11. Cavalli-Sforza, L. L., P. Menozzi, and A. Piazza. 1994. The history and geography of human genes. Princeton Univ. Press, Princeton, NJ.
12. Chakraborty, R. 1980. Gene diversity analysis in nested subdivided populations. Genetics 96:721-723.
13. Chen, D., R. S. Zeigler, H. Leung, and R. J. Nelson. 1995. Population structure of Pyricularia grisea at two screening sites in the Philippines. Phytopathology 85:1011-1020.
14. Chen, R.-S., J. M. Boeger, and B. A. McDonald. 1994. Genetic stability in a population of a plant pathogenic fungus over time. Mol. Ecol. 3:209-218.
15. Clayton, J. W., and D. M. Tretiak. 1972. Amine-citrate buffers for pH control in starch gel electrophoresis. J. Fish. Res. Bd. Can. 29:1169-1172.
16. Cooke, W. B. 1961. The genus Schizophyllum. Mycologia 53:575-599.
17. Crosby, J. L. 1966. Self-incompatibility alleles in the population of Oenothera organensis. Evolution 20:567-579.
18. Ennos, R. A., and K. W. Swales. 1991. Genetic variability and population structure in the canker pathogen Crumenulopsis sororia. Mycol. Res. 95:521-525.
19. Felsenstein, J. 1993. PHYLIP (Phylogeny Inference Package). Vers. 3.5c. Distributed by the author at: http://evolution. genetics.washington.edu/.
20. Fry, W. E., S. B. Goodwin, J. M. Matuszak, L. J. Spielman, M. G. Milgroom, and A. Drenth. 1992. Population genetics and intercontinental migrations of Phytophthora infestans. Annu. Rev. Phytopathol. 30:107-129.
21. Garbelotto, M., T. D. Bruns, F. W. Cobb, and W. J. Otrosina. 1993. Differentiation of intersterility groups and geographic provenances among isolates of Heterobasidion annosum detected by random amplified polymorphic DNA assays. Can. J. Bot. 71: 565-569.
22. Gilbertson, R. L., and L. Ryvarden. 1986. North American polypores, Fungiflora. Oslo, Norway.
23. Goodwin, S. B., M. A. Saghai Maroof, R. W. Allard, and R. K. Webster. 1993. Isozyme variation within and among populations of Rhynchosporium secalis in Europe, Australia and the United States. Mycol. Res. 97:49-58.
24. Gottlieb, L. D. 1981. Gene numbers in species of Astereae that have different chromosome numbers. Proc. Natl. Acad. Sci. USA 78:3726-3729.
25. Gregory, P. H. 1973. Microbiology of the atmosphere. 2d ed. Leonard Hill Books. Aylesbury, U.K.
26. Hamrick, J. L., and M. J. W. Godt. 1990. Allozyme diversity in plant species. Pp. 43-63 in H. D. Brown, M. T. Clegg, A. L. Kahler, and B. S. Weir, eds. Plant population genetics, breeding, and genetic resources. Sinauer, Sunderland, MA.
27. Hedrick, P. W. 1971. A new approach to measuring genetic similarity. Evolution 25:276-280.
28. Hibbett, D. S., Y. Fukumasa-Nakai, A. Tsuneda, and M. J. Donoghue. 1995. Phylogenetic diversity in shiitake inferred from nuclear ribosomal DNA sequences. Mycologia 87:618-638.
29. Hirst, J. M., and G. W. Hurst. 1967. Long-distance spore transport. Symp. Soc. Gen. Microbiol. 17:307-344.
30. Huss, M. J. 1996. Isozyme analysis of population structure and diversity in the puffball species Lycoperdon pyriforme. Mycologia 88:977-985.
31. Karl, S. A., B. W. Bowen, and J. C. Avise. 1992. Global population genetic structure and male-mediated gene flow in the green turtle (Chelonia mydas): RFLP analyses of anonymous nuclear loci. Genetics 131:163-173.
32. Keller, S. M., M. S. Wolfe, J. M. McDermott, and B. A. McDonald. 1997. High genetic similarity among populations of Phaeosphaeria nodorum across wheat cultivars and regions in Switzerland. Phytopathology 87:1134-1139.
33. Koltin, Y., J. Stamberg, and P. A. Lemke. 1972. Genetic structure and evolution of the incompatibility factors in the higher fungi. Bacteriol. Rev. 36:156-171.
34. Kooistra, W. 1993. Atlantic populations of Cladophoropsis membranacea consist of widely distributed, apparently asexually reproducing genotypes. Ph.D diss., Rijksuniversiteit Groningen, The Netherlands.
35. Latta, R. G., and J. B. Mitton. 1997. A comparison of population differentiation across four classes of gene marker in limber pine (Pinus flexilis James). Genetics 146:1153-1163.
36. Leuchtmann, A., and K. Clay. 1996. Isozyme evidence for host races of the fungus Atkinsonella hypoxylon (Clavicipitaceae) infecting the Danthonia (Poaceae) complex in the southern Appalachians. Am. J. Bot. 83:1144-1152.
37. Loos, B. G., D. W. Dyer, T. S. Whittam, and R. K. Selander. 1993. Genetic structure of populations of Porphyromonas gingivalis associated with periodontitis and other oral infections. Infect. Immunol. 61:204-212.
38. Manchenko, G. P. 1994. Handbook for the detection of enzymes on electrophoretic gels. CRC Press, Boca Raton, FL.
39. Maruyama, T., and M. Nei. 1981. Genetic variability maintained by mutation and overdominant selection in finite populations. Genetics 98:444-459.
40. May, B., and D. J. Royse. 1982. Genetic variation and joint segregation of biochemical loci in the common meadow mushroom, Agaricus campestris. Biochem. Genet. 20: 1165-1173.
41. McDonald, B. A., and J. M. McDermott. 1993. Population genetics of plant pathogenic fungi. Bioscience 43:311-319.
42. Milgroom, M. G., and S. E. Lipari. 1995. Population differentiation in the chestnut blight fungus, Cryphonectria parasitica, in eastern North America. Phytopathology 85:155-160.
43. Milgroom, M. G., K. Wang, Y. Zhou, S. E. Lipari, and S. Kaneko. 1996. Intercontinental population structure of the chestnut blight fungus, Cryphonectria parasitica. Mycologia 88:179-190.
44. Mitton, J. B., Y. B. Linhart, J. L. Hamrick, and J. S. Beckman. 1977. Observations on the genetic structure and mating system of ponderosa pine in the Colorado front range. Theor. Appl. Genet. 51:5-13.
45. Murphy, J. F, and O. K. Miller, Jr. 1997. Diversity and local distribution of mating alleles in Marasmiellus praeacutus and Collybia subnuda (Basidiomycetes, Agaricales). Can. J. Bot. 75:8-17.
46. Musser, J. M., J. S. Kroll, D. M. Granoff, E. R. Moxon, B. R. Brodeur, J. Campos, H. Dabernat, W. Frederiksen, J. Hamel, G. Hammond. E. A. Høiby, K. E. Jonsdottir, M. Kabeer, I. Kallings, W. N. Khan, M. Kilian, K. Knowles, H. J. Koornhof, B. Law, K. I. Li, J. Montgomery, P. E. Pattison, J.-C. Piffaretti, A. K. Takala, M. L. Thong, R. A. Wall, J. I. Ward, and R. K. Selander. 1990. Global genetic structure and molecular epidemiology of encapsulated Haemophilus influenzae. Rev. Infect. Dis. 12:75-111.
47. Neel, J. V. 1973. "Private" genetic variants and the frequency of mutation among South American Indians. Proc. Natl. Acad. Sci. USA 70:3311-3315.
48. Nei, M. 1973. Analysis of gene diversity in subdivided populations. Proc. Natl. Acad. Sci. USA 70:3321-3323.
49. _. 1978. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89:583-590.
50. _. 1988. Molecular evolutionary genetics. Columbia Univ. Press, New York.
51. Nei, M., and R. K. Chesser. 1983. Estimation of fixation indices and gene diversities. Ann. Hum. Genet. 47:253-259.
52. Nei, M., and Y. Imaizumi. 1966. Genetic structure of human populations. I. Local differentiation of blood group gene frequencies in Japan. Heredity 21:9-25.
53. Neuhauser, K. S., and R. L. Gilbertson. 1971. Some aspects of bipolar heterothallism in Fomes cajanderi. Mycologia 63:722-735.
54. Noel, T., T. D. Ho Huynh, and J. Labarère. 1991. Genetic variability of the wild incompatibility alleles of the tetrapolar basidiomycete Agrocybe aegerita. Theor. Appl. Genet. 81:745-751.
55. Pady, S. M., and L. Kapica. 1955. Fungi in air over the Atlantic Ocean. Mycologia 47:34-50.
56. Peterson, R. H., and D. Bermudes. 1992. Panellus stypticus: geographically separated interbreeding populations. Mycologia 84: 209-213.
57. Puterka, G. J., W. C. Black, IV, W. M. Steiner, and R. L. Burton. 1993. Genetic variation and phylogenetic relationships among world-wide collections of the Russian wheat aphid, Diuraphis noxia (Mordvilko), inferred from allozyme and RAPD-PCR markers. Heredity 70:604-618.
58. Raper, J. R. 1966. Genetics of sexuality in higher fungi. Ronald Press, New York.
59. Raper, J. R., and R. M. Hoffman. 1974. Schizophyllum commune. Pp. 597-626 in R. C. King, ed. Handbook of genetics. Vol. 1. Plenum Press, New York.
60. Raper, J. R., G. S. Krongelb, and M. G. Baxter. 1958. The number and distribution of incompatibility factors in Schizophyllum commune. Am. Nat. 92:221-232.
61. Rapoport, E. H. 1982. Areogeography: geographic strategies of species. Pergamon Press, Oxford, U.K.
62. Rishbeth, J. 1959. Dispersal of Fomes annosus Fr. and Peniophora gigantea (Fr.) Massee. Trans. Br. Mycol. Soc. 42:243-260.
63. Robertson, A. 1975. Gene frequency distributions as a test of selective neutrality. Genetics 81:775-785.
64. Saville, B. J., H. Yoell, and J. B. Anderson. 1996. Genetic exchange and recombination in populations of the root-infecting fungus Armillaria gallica. Mol. Ecol. 5:485-497.
65. Selander, R. K., R. M. McKinney, T. S. Whittam, W. F. Bibb, D. J. Brenner, F. S. Nolte, and P. E. Pattison. 1985. Genetic structure of populations of Legionella pneumophila. J. Bacteriol. 163: 1021-1037.
66. Shaw, A. J. 1995. Genetic biogeography of the rare "copper moss," Scopelophila cataractae (Pottiaceae). Plant Syst. Evol. 197:43-58.
67. Simchen, G. 1967. Independent evolution of a polygenic system in isolated populations of the fungus Schizophyllum commune. Evolution 21:310-315.
68. Singh, R. S., D. A. Hickey, and J. David. 1982. Genetic differentiation between geographically distant populations of Drosophila melanogaster. Genetics 101:235-256.
69. Slatkin, M. 1985. Rare alleles as indicators of gene flow. Evolution 39:53-65.
70. Smith, A. R. 1972. Comparison of fern and flowering plant distributions with some evolutionary interpretations for ferns. Biotropica 4:4-9.
71. Sokal, R. R., and N. L. Oden. 1978. Spatial autocorrelation in biology. 1. Methodology. Biol. J. Linn. Soc. 10:199-228.
72. Soltis, D. E., C. H. Haufler, D. C. Barrow, and G. J. Gastony. 1983. Starch gel electrophoresis of ferns: a compilation of grinding buffers, gel and electrode buffers, and staining schedules. Am. Fern J. 73:9-27.
73. Spieth, P. T. 1975. Population genetics of allozyme variation in Neurospora intermedia. Genetics 80:785-805.
74. Stackman, E. C., A. W. Henry, G. C. Curran, and W. N. Christopher. 1923. Spores in the upper air. J. Agric. Res. 24:599-606.
75. Stalpers, J. A. 1988. Auriculariopsis and the Schizophyllales. Persoonia 13:495-504.
76. Stenlid, J., J.-O. Karlsson, and N. Högberg. 1994. Intraspecific genetic variation in Heterobasidion annosum revealed by amplification of minisatellite DNA. Mycol. Res. 98:57-63.
77. Takahata, N. 1990. A simple genealogical structure of strongly balanced allelic lines and trans-species evolution of polymorphism. Proc. Natl. Acad. Sci. USA 87:2419-2423.
78. Ullrich, R. C. 1977. Natural distribution of incompatibility factors in basidiomycetous fungi. Mycologia 69:714-719.
79. Ullrich, R. C., and J. R. Raper. 1974. Number and distribution of bipolar incompatibility factors in Sistotrema brinkmannii. Am. Nat. 108:507-518.
80. Van Valen, L. 1965. Morphological variation and the width of ecological niche. Am. Nat. 99:377-390.
81. Van Zanten, B. O. 1978. Experimental studies on trans-oceanic long-range dispersal of moss spores in the southern hemisphere. J. Hattori Bot. Lab. 44:455-482.
82. Vilgalys, R., and J. L. Johnson. 1987. Extensive genetic divergence associated with speciation in filamentous fungi. Proc. Natl. Aca. Sci. USA 84:2355-2358.
83. Vilgalys, R., and B. L. Sun. 1994a. Ancient and recent patterns of geographic speciation in the oyster mushroom Pleurotus revealed by phylogenetic analysis of ribosomal DNA sequences. Proc. Natl. Aca. Sci. USA 91:4599-4603.
84. _. 1994b. Assessment of species distributions in Pleurotus based on trapping of airborne basidiospores. Mycologia 86:270-274.
85. Wang, R.-L., J. F. Wendel, and J. H. Dekker. 1995. Weedy adaptation in Setaria spp. Isozyme analysis of genetic diversity and population genetic structure in Setaria viridis. Am. J. Bot. 82: 308-317.
86. Watson, I. A., and C. N. A. de Sousa. 1983. Long distance transport of spores of Puccinia graminis tritici in the southern hemisphere. Proc. Linn. Soc. N.S.W. 106:311-321.
87. Whitehouse, H. L. K. 1949. Multiple-allelomorph heterothallism in the fungi. New Phytol. 48:212-244.
88. Whittam, T. S., H. Ochman, and R. K. Selander. 1983. Geographic components of linkage disequilibrium in natural populations of Escherichia coli. Mol. Biol. Evol. 1:67-83.
89. Wolf, P. G., E. Sheffield, and C. H. Haufler. 1991. Estimates of gene flow, genetic substructure and population heterozygosity in bracken (Pteridium aquilinum). Biol. J. Linn. Soc. 42:407-423.
90. Workman, P. L., and J. D. Niswander. 1970. Population studies on southwestern Indian tribes. II. Local genetic differentiation in the Papago. Am. J. Hum. Genet. 22:24-49.
91. Wright, S. 1937. The distribution of gene frequencies in populations. Proc. Natl. Acad. Sci. USA 23:307-320.
92. _. 1939. The distribution of self-sterility alleles in populations. Genetics 24:538-552.
93. _. 1960. On the number of self-incompatibility alleles maintained in equilibrium by a given mutation rate in a population of given size: a reexamination. Biometrics 16:61-85.
94. Wyatt, R. 1992. Conservation of rare and endangered bryophytes: Input from population genetics. Biol. Conserv. 59:99-107.
95. Xu, J., R. W. Kerrigan, P. Callac, P. A. Horgen, and J. B. Anderson. 1997. Genetic structure of natural populations of Agaricus bisporus, the commercial button mushroom. J. Hered. 88:482-488.
96. Zhu, H., K. O. Higginbotham, and B. P. Dancik. 1988. Intraspecific genetic variability of isozymes in the ectomycorrhizal fungus Suillus tomentosus. Can. J. Bot. 66:588-594.