Asperisporium and Pantospora (Mycosphaerellaceae): Epitypifications and phylogenetic placement

Persoonia: Molecular Phylogeny and Evolution of Fungi

Volumn 27, Issue , 2011, Pages 1-8

  Minnis, A M ^a   Kennedy, A H ^b   Grenier, D B ^b   Rehner, S A ^a   Bischoff, J F ^b  

^a AGRICULTURAL RESEARCH SERVICE   (United States)

^b UNITED STATES DEPARTMENT OF AGRICULTURE   (United States)

Author keywords

Ascomycota; Capnodiales; Dothideomycetes; Lectotype; Pawpaw; Pseudocercospora ulmifoliae

Indexed keywords

ASCOMYCOTA; ASIMINA TRILOBA; CAPNODIALES; CARICA PAPAYA; DOTHIDEOMYCETES; MYCOSPHAERELLA; MYCOSPHAERELLACEAE; PASSALORA; PSEUDOCERCOSPORA;

EID: 84856364762     PISSN: 00315850     EISSN: None     Source Type: Journal    
DOI: 10.3767/003158511X602071     Document Type: Article

References (53)

1. Aptroot A. 2006. Mycosphaerella and its anamorphs: 2. Conspectus of Mycosphaerella. CBS Biodiversity Series 5: 1-231.
2. Aveskamp M, Gruyter H de, Woudenberg J, Verkley G, Crous PW. 2010. Highlights of the Didymellaceae: A polyphasic approach to characterize Phoma and related pleosporalean genera. Studies in Mycology 65: 1-60.
3. Baker WA, Partridge EC, Morgan-Jones G. 2000. Notes on hyphomycetes. LXXVIII. Asperisporium sequoiae, the causal organism of conifer needle blight, reclassified in Cercosporidium, with comments on the status of the genus. Mycotaxon 76: 247-256.
4. Barreto RW, Evans HC. 1995. The mycobiota of the weed Mikania micrantha in southern Brazil with particular reference to fungal pathogens for biological control. Mycological Research 99: 343-352.
5. Braun U. 2000a. Miscellaneous notes on some micromycetes. Schlechtendalia 5: 31-56.
6. Braun U. 2000b. Annotated list of Cercospora spp. described by C. Spegazzini. Schlechtendalia 5: 57-79.
7. Braun U, Crous PW. 2007. The diversity of cercosporoid hyphomycetes - new species, combinations, names and nomenclatural clarifications. Fungal Diversity 26: 55-72.
8. Chupp C. 1953. A monograph of the fungus genus Cercospora. Published by the author, Ithaca, New York.
9. Ciferri R. 1938. Mycoflora domingensis exsiccata. Annales Mycologici 36: 198-245.
10. Crous PW. 1998. Mycosphaerella spp. and their anamorphs associated with leaf spot diseases of Eucalyptus. Mycological Memoirs 21: 1-170.
11. Crous PW. 2009. Taxonomy and phylogeny of the genus Mycosphaerella and its anamorphs. Fungal Diversity 38: 1-24.
12. Crous PW, Braun U. 2003. Mycosphaerella and its anamorphs: 1. Names published in Cercospora and Passalora. CBS Biodiversity Series 1: 1-571.
13. Crous PW, Braun U, Groenewald JZ. 2007. Mycosphaerella is polyphyletic. Studies in Mycology 58: 1-32.
14. Crous PW, Summerell BA, Carnegie AJ, Wingfield MJ, Groenewald JZ. 2009a. Novel species of Mycosphaerellaceae and Teratosphaeriaceae. Persoonia 23: 119-146.
15. Crous PW, Summerell BA, Carnegie AJ, Wingfield MJ, Hunter GC, Burgess TI, Andjic V, Barber PA, Groenewald JZ. 2009b. Unravelling Mycosphaerella: do you believe in genera? Persoonia 23: 99-118.
16. Deighton FC. 1976. Studies on Cercospora and allied genera. VI. Pseudocercospora Speg., Pantospora Cif. and Cercoseptoria Petr. Mycological Papers 140: 1-168.
17. Drummond AJ, Ashton B, Buxton S, Cheung M, Cooper A, Heled J, Kearse M, Moir R, Stones-Havas S, Sturrock S, Thierer T, Wilson A. 2010. Geneious v. 5.1, Available from www.geneious.com.
18. Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research 32: 1792-1797.
19. Ellis MB. 1971. Dematiaceous hyphomycetes. Commonwealth Mycological Institute, Kew, Surrey, England.
20. Ellis MB. 1976. More dematiaceous hyphomycetes. Commonwealth Mycological Institute, Kew, Surrey, England.
21. Ellis MB, Holliday P. 1972. Asperisporium caricae. CMI Descriptions of Pathogenic Fungi and Bacteria 347: 1-2.
22. Farr DF, Rossman AY. 2011. Fungal databases, systematic mycology and microbiology laboratory, ARS, USDA. Retrieved March 30, 2011 from nt.ars-grin.gov/fungaldatabases/.
23. Goloboff PA, Farris JS, Nixon KC. 2008. TNT, a free program for phylogenetic analysis. Cladistics 24: 774-786.
24. Graham SO. 1959. The effects of various reagents, mounting media, and dyes on the teliospore walls of Tilletia controversa Kühn. Mycologia 51: 477-491.
25. Huelsenbeck JP, Ronquist F. 2001. MrBayes: Bayesian inference of phylogeny. Bioinformatics 17: 754-755.
26. Kirk PM, Cannon PF, Minter DW, Stalpers JA with assistance. 2008. Ainsworth & Bisby's dictionary of the fungi, tenth edition. Cab International, Wallingford, UK.
27. Kornerup A, Wanscher JH. 1967. Methuen handbook of color, 2nd ed. Methuen & Co Ltd, London, UK.
28. Largent D, Johnson D, Watling R. 1977. How to identify mushrooms to genus III. Microscopic features. Mad River Press, Eureka, CA.
29. Liu YJ, Whelen S, Hall BD. 1999. Phylogenetic relationships among ascomycetes: evidence from an RNA polymerase II subunit. Molecular Biology and Evolution 16: 1799-1808.
30. Malkus A, Chang P-FL, Sabina MZ, Chung K, Shao J, Cunfer BM, Arseniuk E, Ueng PP. 2006. RNA polymerase II gene (RPB2) encoding the second largest protein subunit in Phaeosphaeria nodorum and P. avenaria. Mycological Research 110: 1152-1164.
31. Maublanc A. 1913a '1912'. Sobre uma molestia do mamoeiro (Caryca Papayal, L.)/Sur une maladie des feuilles du papayer Carica papaya. Lavoura 16: 204-212.
32. Maublanc A. 1913b. Sur une maladie des feuilles du papayer (Carica papaya). Bulletin Trimestriel de la Société Mycologique de France 29: 353-358.
33. McNeill J, Barrie FR, Burdet HM, Demoulin V, Hawksworth DL, Marhold K, Nicolson DH, Prado J, Silva PC, Skog JE, Wiersema JH, Turland NJ (eds). 2006. International code of botanical nomenclature (Vienna code): Adopted by the Seventeenth International Botanical Congress, Vienna, Austria, July 2005. Gantner, Ruggell, Liechtenstein.
34. Medeiros AG. 1962. Dictyocephala novo género de fungos Dematiaceae. Universidade do Recife, Instituto de Micologia, Publicação No. 372: 1-24.
35. Monclavo JM, Lutzoni FM, Rehner SA, Johnson J, Vilgalys R. 2000. Phylogenetic relationships of agaric fungi based on nuclear large subunit ribosomal DNA sequences. Systematic Biology 49: 278-305.
36. Nylander JAA. 2004. MrModeltest, v. 2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University.
37. Obregón-Botero R. 1941. Cuatro nuevos deuteromicetos Colombianos. Caldasia 1: 49-51.
38. Patil BV, Thirumalachar MJ. 1966. Studies on some fungi of Masharashtra- India-I. Sydowia 20: 33-38.
39. Posada D, Buckley TR. 2004. Model selection and model averaging in phylogenetics: advantages of akaike information criterion and Bayesian approaches over likelihood ratio tests. Systematic Biology 53: 793-808.
40. Rambaut A. 2009. FigTree v. 1.3.1. Computer program and documentation distributed by the author at http://tree.bio.ed.ac.uk/software/.
41. Rambaut A, Drummond AJ. 2007. Tracer v. 1.5. Computer program and documentation distributed by the authors at http://beast.bio.ed.ac.uk/Tracer.
42. Ree RH. 2007. Gapcode.py, v. 2.0. Distributed by the author at http://www.reelab.net/home/.
43. Reeb V, Lutzoni F, Roux C. 2004. Multilocus phylogenetic circumscription of the lichen-forming fungi family Acarosporaceae and its position within the Ascomycota. Molecular Phylogeny and Evolution 32: 1036-1060.
44. Ronquist F, Huelsenbeck JP. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574.
45. Schubert K, Braun U. 2005. Taxonomic revision of the genus Cladosporium s.l. 4. Species reallocated to Asperisporium, Dischloridium, Fusicladium, Passalora, Pseudoasperisporium and Stenella. Fungal Diversity 20: 187-208.
46. Simmons MP, Ochoterena R. 2000. Gaps as characters in sequence-based phylogenetic analyses. Systematic Biology 49: 369-381.
47. Sivanesan A. 1984. The bitunicate ascomycetes and their anamorphs. Gantner Verlag, Vaduz, Liechtenstein.
48. Spegazzini C. 1886. Fungi Guaranitici. Pugillus I. Anales de Sociedad Científica Argentina 22: 186-224.
49. Stevens HE. 1939. Papaya diseases. Proceedings of the Florida State Horticultural Society 52: 57-63.
50. Thiers B. 2011 [continuously updated]. Index Herbariorum: A global directory of public herbaria and associated staff. New York Botanical Garden's Virtual Herbarium. http://sweetgum.nybg.org/ih/.
51. Verkley GJM, Crous PW, Groenewald JZ, Braun U, Aptroot A. 2004. Mycosphaerella punctiformis revisited: morphology, phylogeny, and epitypification of the type species of the genus Mycosphaerella (Dothideales, Ascomycota). Mycological Research 108: 1271-1282.
52. Vilgalys R, Hester M. 1990. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172: 4238-4246.
53. White TJ, Bruns T, Lee S, Taylor JW. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds), PCR protocols: A guide to methods and applications. Academic Press, Inc., New York, New York: 315-322.