-
1
-
-
33846269602
-
TRNA's Wobble Decoding of the Genome: 40 Years of Modification
-
DOI 10.1016/j.jmb.2006.11.046, PII S0022283606015865
-
Agris PF, Vendeix FAP, Graham WD (2007) tRNA's wobble decoding of the genome: 40 years of modification. J Mol Biol 366:1-13 (Pubitemid 46123342)
-
(2007)
Journal of Molecular Biology
, vol.366
, Issue.1
, pp. 1-13
-
-
Agris, P.F.1
Vendeix, F.A.P.2
Graham, W.D.3
-
2
-
-
0035546157
-
Gene expression and molecular evolution
-
DOI 10.1016/S0959-437X(00)00250-1
-
Akashi H (2001) Gene expression and molecular evolution. Curr Opin Gen Dev 11:660-666 (Pubitemid 33000338)
-
(2001)
Current Opinion in Genetics and Development
, vol.11
, Issue.6
, pp. 660-666
-
-
Akashi, H.1
-
3
-
-
0035581083
-
Misreading of termination codons in eukaryotes by natural nonsense suppressor tRNAs
-
Beier H, Grimm M (2001) Misreading of termination codons in eukaryotes by natural nonsense suppressor tRNAs. Nucleic Acids Res 29:4767-4782 (Pubitemid 33133548)
-
(2001)
Nucleic Acids Research
, vol.29
, Issue.23
, pp. 4767-4782
-
-
Beier, H.1
Grimm, M.2
-
4
-
-
4544235395
-
Archaeal phylogeny based on proteins of the transcription and translation machineries: Tackling the Methanopyrus kandleri paradox
-
15003120 10.1186/gb-2004-5-3-r17
-
Brochier C, Forterre P, Gribaldo S (2004) Archaeal phylogeny based on proteins of the transcription and translation machineries: tackling the Methanopyrus kandleri paradox. Genome Biol 5:R17
-
(2004)
Genome Biol
, vol.5
, pp. 17
-
-
Brochier, C.1
Forterre, P.2
Gribaldo, S.3
-
5
-
-
5044244494
-
A novel method for estimating ancestral amino acid composition and its application to proteins of the Last Universal Ancestor
-
DOI 10.1093/bioinformatics/bth235
-
Brooks DJ, Fresco JR, Singh M (2004) A novel method for estimating ancestral amino acid composition and its application to proteins of the Last Universal Ancestor. Bioinformatics 20:2251-2257 (Pubitemid 39341614)
-
(2004)
Bioinformatics
, vol.20
, Issue.14
, pp. 2251-2257
-
-
Brooks, D.J.1
Fresco, J.R.2
Singh, M.3
-
6
-
-
8644225583
-
Nonsense mutations in the essential gene SUP35 of Saccharomyces cerevisiae are non-lethal
-
DOI 10.1007/s00438-004-1053-1
-
Chabelskaya S, Kiktev D, Philippe M, Inge-Vechtomov, Zhouravleva G (2004) Nonsense mutations in the essential gene SUP35 of Saccharomyces cerevisiae are non-lethal. Mol Genet Genomics 272:297-307 (Pubitemid 39506564)
-
(2004)
Molecular Genetics and Genomics
, vol.272
, Issue.3
, pp. 297-307
-
-
Chabelskaya, S.1
Kiktev, D.2
Inge-Vechtomov, S.3
Philippe, M.4
Zhouravleva, G.5
-
7
-
-
0013936167
-
Codon-anticodon pairing: The wobble hypothesis
-
5969078 10.1016/S0022-2836(66)80022-0 1:CAS:528:DyaF28XkvVelsbY%3D
-
Crick FHC (1966) Codon-anticodon pairing: the wobble hypothesis. J Mol Biol 19:548-555
-
(1966)
J Mol Biol
, vol.19
, pp. 548-555
-
-
Crick, F.H.C.1
-
8
-
-
0014378880
-
The origin of the genetic code
-
4887876 10.1016/0022-2836(68)90392-6 1:CAS:528:DyaF1MXksVSiug%3D%3D
-
Crick FHC (1968) The origin of the genetic code. J Mol Biol 38:367-379
-
(1968)
J Mol Biol
, vol.38
, pp. 367-379
-
-
Crick, F.H.C.1
-
9
-
-
33646248891
-
The non-monophyletic origin of the tRNA molecule and the origin of genes only after the evolutionary stage of the Last Universal Common Ancestor (LUCA)
-
16289209 10.1016/j.jtbi.2005.09.023 1:CAS:528:DC%2BD28XksVahurk%3D
-
Di Giulio M (2006) The non-monophyletic origin of the tRNA molecule and the origin of genes only after the evolutionary stage of the Last Universal Common Ancestor (LUCA). J Theor Biol 240:343-352
-
(2006)
J Theor Biol
, vol.240
, pp. 343-352
-
-
Di Giulio, M.1
-
10
-
-
52449089127
-
An extension of the coevolution theory of the origin of the genetic code
-
18775066 10.1186/1745-6150-3-37
-
Di Giulio M (2008) An extension of the coevolution theory of the origin of the genetic code. Biol Direct 3:37
-
(2008)
Biol Direct
, vol.3
, pp. 37
-
-
Di Giulio, M.1
-
11
-
-
33747141429
-
When nonsense makes sense and vice versa: Noncanonical decoding events at stop codons in eukaryotes
-
DOI 10.1134/S0026893306040182
-
Doronina VA, Brown JD (2006) When nonsense makes sense and vice versa: noncanonical decoding events at stop codons in eukaryotes. Mol Biol 40:654-663 (Pubitemid 44221394)
-
(2006)
Molecular Biology
, vol.40
, Issue.4
, pp. 654-663
-
-
Doronina, V.A.1
Brown, J.D.2
-
12
-
-
0017667182
-
The hypercycle. A principle of natural self organization. Part A: Emergence of the hypercycle
-
Eigen M, Schuster P (1977) The hypercycle, a principle of natural self-organization Part A: emergence of the hypercycle. Naturwissenschaften 64:541-565 (Pubitemid 8215838)
-
(1977)
Naturwissenschaften
, vol.64
, Issue.11
, pp. 541-565
-
-
Eigen, M.1
Schuster, P.2
-
13
-
-
0023471213
-
The phylogeny of tRNA sequences provides evidence for ambiguity reduction in the origin of the genetic code
-
Fitch WM, Upper K (1987) The phylogeny of tRNA sequences provides evidence for ambiguity reduction in the origin of the genetic code. Cold Spring Harb Symp Quant Biol 52:759-767 (Pubitemid 18262388)
-
(1987)
Cold Spring Harbor Symposia on Quantitative Biology
, vol.52
, pp. 759-767
-
-
Fitch, W.M.1
Upper, K.2
-
14
-
-
77954993696
-
Rooting the ribosomal tree of life
-
20194428 10.1093/molbev/msq057 1:CAS:528:DC%2BC3cXptlegsbc%3D
-
Fournier GP, Gogarten JP (2010) Rooting the ribosomal tree of life. Mol Biol Evol 27:1792-1801
-
(2010)
Mol Biol Evol
, vol.27
, pp. 1792-1801
-
-
Fournier, G.P.1
Gogarten, J.P.2
-
15
-
-
80054746223
-
An alternative to the RNA world hypothesis
-
10.4081/eb.2011.e2
-
Francis BR (2011) An alternative to the RNA world hypothesis. Trends Evol Biol 3:e2
-
(2011)
Trends Evol Biol
, vol.3
, pp. 2
-
-
Francis, B.R.1
-
16
-
-
62449123460
-
Tri-split tRNA is a transfer RNA made from 3 transcripts that provides insight into the evolution of fragmented tRNAs in archaea
-
19190180 10.1073/pnas.0808246106 1:CAS:528:DC%2BD1MXislahsbw%3D
-
Fujishima K, Sugahara J, Kikuta K, Hirano R, Sato A, Tomita M, Kanai A (2009) Tri-split tRNA is a transfer RNA made from 3 transcripts that provides insight into the evolution of fragmented tRNAs in archaea. Proc Natl Acad Sci USA 106:2683-2687
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 2683-2687
-
-
Fujishima, K.1
Sugahara, J.2
Kikuta, K.3
Hirano, R.4
Sato, A.5
Tomita, M.6
Kanai, A.7
-
17
-
-
71849108697
-
Deciphering synonymous codons in the three domains of life: Co-evolution with specific tRNA modification enzymes
-
19931533 10.1016/j.febslet.2009.11.052 1:CAS:528:DC%2BD1MXhsFGgtrjE
-
Grosjean H, de Crécy-Lagard V, Marck C (2010) Deciphering synonymous codons in the three domains of life: co-evolution with specific tRNA modification enzymes. FEBS Lett 584:252-264
-
(2010)
FEBS Lett
, vol.584
, pp. 252-264
-
-
Grosjean, H.1
De Crécy-Lagard, V.2
Marck, C.3
-
19
-
-
67449137928
-
A four-column theory for the origin of the genetic code: Tracing the evolutionary pathways that gave rise to an optimized code
-
19393096 10.1186/1745-6150-4-16
-
Higgs PG (2009) A four-column theory for the origin of the genetic code: tracing the evolutionary pathways that gave rise to an optimized code. Biol Direct 4:16
-
(2009)
Biol Direct
, vol.4
, pp. 16
-
-
Higgs, P.G.1
-
20
-
-
0036122373
-
Origins of gene, genetic code, protein and life: Comprehensive view of life systems from a GNC-SNS primitive genetic code hypothesis
-
Ikehara K (2002) Origins of gene, genetic code, protein and life: comprehensive view of life systems from a GNC-SNS primitive genetic code hypothesis. J Biosci 27:165-186 (Pubitemid 34218619)
-
(2002)
Journal of Biosciences
, vol.27
, Issue.2
, pp. 165-186
-
-
Ikehara, K.1
-
21
-
-
77949820848
-
Agmatine-conjugated cytidine in a tRNA anticodon is essential for AUA decoding in archaea
-
20139989 10.1038/nchembio.323 1:CAS:528:DC%2BC3cXhs1Olsbo%3D
-
Ikeuchi Y, Kimura S, Numata T, Nakamura D, Yokogawa T, Ogata T, Wada T, Suzuki T, Suzuki T (2010) Agmatine-conjugated cytidine in a tRNA anticodon is essential for AUA decoding in archaea. Nat Chem Biol 6:277-282
-
(2010)
Nat Chem Biol
, vol.6
, pp. 277-282
-
-
Ikeuchi, Y.1
Kimura, S.2
Numata, T.3
Nakamura, D.4
Yokogawa, T.5
Ogata, T.6
Wada, T.7
Suzuki, T.8
Suzuki, T.9
-
22
-
-
43249104840
-
Eukaryotic wobble uridine modifications promote a functionally redundant decoding system
-
DOI 10.1128/MCB.01542-07
-
Johansson MJ, Esberg A, Huang B, Bjork GR, Bystrom AS (2008) Eukaryotic wobble uridine modifications promote a functionally redundant decoding system. Mol Cell Biol 28:3301-3312 (Pubitemid 351657094)
-
(2008)
Molecular and Cellular Biology
, vol.28
, Issue.10
, pp. 3301-3312
-
-
Johansson, M.J.O.1
Esberg, A.2
Huang, B.3
Bjork, G.R.4
Bystrom, A.S.5
-
23
-
-
14144251192
-
A universal trend of amino acid gain and loss in protein evolution
-
DOI 10.1038/nature03306
-
Jordan IK, Kondrashov FA, Adzhubei IA, Wolf YI, Koonin EV, Kondrashov AS, Sunyaev S (2005) A universal trend of amino acid gain and loss in protein evolution. Nature 433:633-638 (Pubitemid 40282996)
-
(2005)
Nature
, vol.433
, Issue.7026
, pp. 633-638
-
-
Jordan, I.K.1
Kondrashov, F.A.2
Adzhubei, I.A.3
Wolf, Y.I.4
Koonin, E.V.5
Kondrashov, A.S.6
Sunyaev, S.7
-
24
-
-
0027458828
-
Unassigned or nonsense codons in Micrococcus luteus
-
DOI 10.1006/jmbi.1993.1125
-
Kano A, Andachi Y, Ohama T, Osawa S (1993) Unassigned or nonsense codons in Micrococcus luteus. J Mol Biol 230:51-56 (Pubitemid 23093547)
-
(1993)
Journal of Molecular Biology
, vol.230
, Issue.1
, pp. 51-56
-
-
Kano, A.1
Ohama, T.2
Abe, R.3
Osawa, S.4
-
25
-
-
34547470915
-
Structure of pyrrolysyl-tRNA synthetase, an archaeal enzyme for genetic code innovation
-
DOI 10.1073/pnas.0704769104
-
Kavran JM, Gundllapalli S, O'Donoghue P, Englert M, Söll D, Steitz TA (2007) Structure of pyrrolysyl-tRNA synthetase, an archaeal enzyme for genetic code innovation. Proc Natl Acad Sci USA 104:11268-11273 (Pubitemid 47175130)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.27
, pp. 11268-11273
-
-
Kavran, J.M.1
Gundllapalli, S.2
O'Donoghue, P.3
Englert, M.4
Soll, D.5
Steitz, T.A.6
-
26
-
-
0029879951
-
A non-canonical genetic code in an early diverging eukaryotic lineage
-
Keeling PJ, Doolittle WF (1996) A non-canonical genetic code in an early diverging eukaryotic lineage. EMBO J 15:2285-2290 (Pubitemid 26141144)
-
(1996)
EMBO Journal
, vol.15
, Issue.9
, pp. 2285-2290
-
-
Keeling, P.J.1
Doolittle, W.F.2
-
27
-
-
33845895536
-
The frequency of translational misreading errors in E. coli is largely determined by tRNA competition
-
DOI 10.1261/rna.294907
-
Kramer EB, Farabaugh PJ (2007) The frequency of translational misreading errors in E. coli is largely determined by tRNA competition. RNA 13:87-96 (Pubitemid 46026183)
-
(2007)
RNA
, vol.13
, Issue.1
, pp. 87-96
-
-
Kramer, E.B.1
Farabaugh, P.J.2
-
29
-
-
70350540673
-
Versatile dual reporter gene systems for investigating stop codon readthrough in plants
-
19816579 10.1371/journal.pone.0007354
-
Lao NT, Maloney AP, Atkins JF, Kavanagh TA (2009) Versatile dual reporter gene systems for investigating stop codon readthrough in plants. PLoS ONE 4:e7354
-
(2009)
PLoS ONE
, vol.4
, pp. 7354
-
-
Lao, N.T.1
Maloney, A.P.2
Atkins, J.F.3
Kavanagh, T.A.4
-
30
-
-
0023804470
-
Genetic code development by stop codon takeover
-
10.1016/S0022-5193(88)80074-2 1:CAS:528:DyaL1MXjsVyjsQ%3D%3D
-
Lehman N, Jukes TH (1988) Genetic code development by stop codon takeover. J Theoret Biol 135:203-214
-
(1988)
J Theoret Biol
, vol.135
, pp. 203-214
-
-
Lehman, N.1
Jukes, T.H.2
-
31
-
-
45749090511
-
Degeneracy of the genetic code and stability of the base pair at the second position of the anticodon
-
DOI 10.1261/rna.1029808
-
Lehmann J, Libchaber A (2008) Degeneracy of the genetic code and stability of the base pair at the second position of the anticodon. RNA 14:1264-1269 (Pubitemid 351872183)
-
(2008)
RNA
, vol.14
, Issue.7
, pp. 1264-1269
-
-
Lehmann, J.1
Libchaber, A.2
-
32
-
-
33845691072
-
In vivo contextual requirements for UAG translation as pyrrolysine
-
DOI 10.1111/j.1365-2958.2006.05500.x
-
Longstaff DG, Blight SK, Zhang L, Green-Church KB, Krzycki JA (2007) In vivo contextual requirements for UAG translation as pyrrolysine. Mol Microbiol 63:229-241 (Pubitemid 44968121)
-
(2007)
Molecular Microbiology
, vol.63
, Issue.1
, pp. 229-241
-
-
Longstaff, D.G.1
Blight, S.K.2
Zhang, L.3
Green-Church, K.B.4
Krzycki, J.A.5
-
33
-
-
0035936577
-
The molecular basis of nuclear genetic code change in ciliates
-
DOI 10.1016/S0960-9822(01)00028-8
-
Lozupone CA, Knight RD, Landweber LF (2001) The molecular basis of nuclear genetic code change in ciliates. Curr Biol 11:65-74 (Pubitemid 32116838)
-
(2001)
Current Biology
, vol.11
, Issue.2
, pp. 65-74
-
-
Lozupone, C.A.1
Knight, R.D.2
Landweber, L.F.3
-
34
-
-
77649263055
-
Agmatidine, a modified cytidine in the anticodon of archaeal tRNA(Ile), base pairs with adenosine but not with guanosine
-
20133752 10.1073/pnas.0914869107 1:CAS:528:DC%2BC3cXis1Clt78%3D
-
Mandal D, Kohrer C, Su D, Russell SP, Krivos K, Castleberry CM, Blum P, Limbach PA, Söll D, RajBhandary UL (2010) Agmatidine, a modified cytidine in the anticodon of archaeal tRNA(Ile), base pairs with adenosine but not with guanosine. Proc Natl Acad Sci USA 107:2872-2877
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 2872-2877
-
-
Mandal, D.1
Kohrer, C.2
Su, D.3
Russell, S.P.4
Krivos, K.5
Castleberry, C.M.6
Blum, P.7
Limbach, P.A.8
Söll, D.9
Rajbhandary, U.L.10
-
35
-
-
0025760725
-
UGA is translated as cysteine in pheromone 3 of Euplotes octocarinatus
-
Meyer F, Schmidt HJ, Plumper E, Hasilik A, Mersmann G, Meyer HE, Engström A, Heckmann K (1991) UGA is translated as cysteine in pheromone 3 of Euplotes octocarinatus. Proc Natl Acad Sci USA 88:3758-3761 (Pubitemid 21916703)
-
(1991)
Proceedings of the National Academy of Sciences of the United States of America
, vol.88
, Issue.9
, pp. 3758-3761
-
-
Meyer, F.1
Schmidt, H.J.2
Plumper, E.3
Hasilik, A.4
Mersmann, G.5
Meyer, H.E.6
Engstrom, A.7
Heckmann, K.8
-
36
-
-
0023734317
-
Codon and amino-acid specificities of a transfer RNA are both converted by a single post-transcriptional modification
-
DOI 10.1038/336179a0
-
Muramatsu T, Nishikawa K, Nemoto F, Kuchino Y, Nishimura S, Miyazawa T, Yokoyama S (1988) Codon and amino acid specificities of a transfer RNA are both converted by a single post-transcriptional modification. Nature 336:179-181 (Pubitemid 18266147)
-
(1988)
Nature
, vol.336
, Issue.6195
, pp. 179-181
-
-
Muramatsu, T.1
Nishikawa, K.2
Nemoto, F.3
Kuchino, Y.4
Nishimura, S.5
Miyazawa, T.6
Yokoyama, S.7
-
37
-
-
77951755021
-
Gln increases the viability of Saccharomyces cerevisiae strains with nonsense mutations in the SUP45 gene
-
10.1134/S0026893310020123 1:CAS:528:DC%2BC3cXltFKjt7k%3D
-
Gln increases the viability of Saccharomyces cerevisiae strains with nonsense mutations in the SUP45 gene. Mol Biol 44:268-276
-
(2010)
Mol Biol
, vol.44
, pp. 268-276
-
-
Murina, O.A.1
Moskalenko, S.E.2
Zhouravleva, G.A.3
-
38
-
-
33747125139
-
Snapshots of tRNA sulphuration via an adenylated intermediate
-
DOI 10.1038/nature04896, PII NATURE04896
-
Numata T, Ikeuchi Y, Fukai S, Suzuki T, Nureki O (2006) Snapshots of tRNA sulphuration via an adenylated intermediate. Nature 442:419-424 (Pubitemid 44264786)
-
(2006)
Nature
, vol.442
, Issue.7101
, pp. 419-424
-
-
Numata, T.1
Ikeuchi, Y.2
Fukai, S.3
Suzuki, T.4
Nureki, O.5
-
39
-
-
0026013476
-
CGG: An unassigned or nonsense codon in Mycoplasma capricolum
-
Oba T, Andachi Y, Muto A, Osawa S (1991) CGG: An unassigned or nonsense codon in Mycoplasma capricolum. Proc Natl Acad Sci USA 88:921-925 (Pubitemid 21916136)
-
(1991)
Proceedings of the National Academy of Sciences of the United States of America
, vol.88
, Issue.3
, pp. 921-925
-
-
Oba, T.1
Andachi, Y.2
Muto, A.3
Osawa, S.4
-
40
-
-
0026574207
-
Recent evidence for evolution of the genetic code
-
1579111 1:CAS:528:DyaK38Xit12jtrw%3D
-
Osawa S, Jukes TH, Watanabe K, Muto A (1992) Recent evidence for evolution of the genetic code. Microbiol Rev 56:229-264
-
(1992)
Microbiol Rev
, vol.56
, pp. 229-264
-
-
Osawa, S.1
Jukes, T.H.2
Watanabe, K.3
Muto, A.4
-
41
-
-
2942537836
-
Artificially ambiguous genetic code confers growth yield advantage
-
DOI 10.1073/pnas.0402893101
-
Pezo V, Metzgar D, Hendrickson TL, Waas WF, Hazebroucl S, Döring V, Marlière P, Schimmel P, de Crécy-Lagard V (2004) Artificially ambiguous genetic code confers growth yield advantage. Proc Natl Acad Sci USA 101:8593-8597 (Pubitemid 38745815)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.23
, pp. 8593-8597
-
-
Pezo, V.1
Metzgar, D.2
Hendrickson, T.L.3
Waas, W.F.4
Hazebrouck, S.5
Doring, V.6
Marliere, P.7
Schimmel, P.8
De Crecy-Lagard, V.9
-
42
-
-
77956276464
-
TRNA biology charges to the front
-
20810645 10.1101/gad.1956510
-
Phizicky EM, Hopper AK (2010) tRNA biology charges to the front. Genes Dev 24:1832-1860
-
(2010)
Genes Dev
, vol.24
, pp. 1832-1860
-
-
Phizicky, E.M.1
Hopper, A.K.2
-
43
-
-
77955955750
-
The influence of anticodon-codon interactions and modified bases on codon usage bias in bacteria
-
20403966 10.1093/molbev/msq102 1:CAS:528:DC%2BC3cXhtVGrt7bM
-
Ran W, Higgs PG (2010) The influence of anticodon-codon interactions and modified bases on codon usage bias in bacteria. Mol Biol Evol 27:2129-2140
-
(2010)
Mol Biol Evol
, vol.27
, pp. 2129-2140
-
-
Ran, W.1
Higgs, P.G.2
-
44
-
-
46449136416
-
Transfer RNA genes in pieces
-
DOI 10.1038/embor.2008.101, PII EMBOR2008101
-
Randau L, Söll D (2008) Transfer RNA genes in pieces. EMBO Rep 9:623-628 (Pubitemid 351927682)
-
(2008)
EMBO Reports
, vol.9
, Issue.7
, pp. 623-628
-
-
Randau, L.1
Soll, D.2
-
45
-
-
79951797073
-
On origin of genetic code and tRNA before translation
-
21342520 10.1186/1745-6150-6-14 1:CAS:528:DC%2BC3MXjtVyltrk%3D
-
Rodin AS, Szatmáry E, Rodin SN (2011) On origin of genetic code and tRNA before translation. Biol Direct 6:14
-
(2011)
Biol Direct
, vol.6
, pp. 14
-
-
Rodin, A.S.1
Szatmáry, E.2
Rodin, S.N.3
-
46
-
-
38849159102
-
Superwobbling facilitates translation with reduced tRNA sets
-
DOI 10.1038/nsmb.1370, PII NSMB1370
-
Rogalski M, Karcher D, Bock R (2008) Superwobbling facilitates translation with reduced tRNA sets. Nat Struct Biol 15:192-198 (Pubitemid 351207507)
-
(2008)
Nature Structural and Molecular Biology
, vol.15
, Issue.2
, pp. 192-198
-
-
Rogalski, M.1
Karcher, D.2
Bock, R.3
-
47
-
-
79961166274
-
The genetic code of the fungal CTG clade
-
21819941 10.1016/j.crvi.2011.05.008 1:CAS:528:DC%2BC3MXpvFCgs7g%3D
-
Santos MAS, Gomes AC, Santos MC, Carreto LC, Moura GR (2011) The genetic code of the fungal CTG clade. C R Biol 334:607-611
-
(2011)
C R Biol
, vol.334
, pp. 607-611
-
-
Santos, M.A.S.1
Gomes, A.C.2
Santos, M.C.3
Carreto, L.C.4
Moura, G.R.5
-
48
-
-
0024721315
-
Strong homology between the small subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase of two species of Acetabularia and the occurrence of unusual codon usage
-
2573818 10.1007/BF00332408 1:CAS:528:DyaK3cXitlSmtL4%3D
-
Schneider SU, Leible MB, Yang XP (1989) Strong homology between the small subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase of two species of Acetabularia and the occurrence of unusual codon usage. Mol Gen Genet 218:445-452
-
(1989)
Mol Gen Genet
, vol.218
, pp. 445-452
-
-
Schneider, S.U.1
Leible, M.B.2
Yang, X.P.3
-
49
-
-
33748959526
-
The coevolution of genes and genetic codes: Crick's frozen accident revisited
-
DOI 10.1007/s00239-004-0176-7
-
Sella G, Ardell DH (2006) The coevolution of genes and genetic codes: Crick's Frozen Accident revisited. J Mol Evol 63:297-313 (Pubitemid 44440473)
-
(2006)
Journal of Molecular Evolution
, vol.63
, Issue.3
, pp. 297-313
-
-
Sella, G.1
Ardell, D.H.2
-
50
-
-
34250704167
-
The mechanisms of codon reassignments in mitochondrial genetic codes
-
DOI 10.1007/s00239-006-0284-7
-
Sengupta S, Yang X, Higgs PG (2007) The mechanisms of codon reassignments in mitochondrial genetic codes. J Mol Evol 64:662-688 (Pubitemid 46956760)
-
(2007)
Journal of Molecular Evolution
, vol.64
, Issue.6
, pp. 662-688
-
-
Sengupta, S.1
Yang, X.2
Higgs, P.G.3
-
51
-
-
75649108250
-
Revisiting the operational code for amino acids: Ensemble attributes and their implications
-
19952117 10.1261/rna.1745910 1:CAS:528:DC%2BC3cXislSntQ%3D%3D
-
Shaul S, Berel D, Benjamini Y, Graur D (2010) Revisiting the operational code for amino acids: ensemble attributes and their implications. RNA 16:141-153
-
(2010)
RNA
, vol.16
, pp. 141-153
-
-
Shaul, S.1
Berel, D.2
Benjamini, Y.3
Graur, D.4
-
52
-
-
0002124567
-
Degeneracy of the genetic code: Extent, nature, and genetic implications
-
V. Bryson H.J. Vogel (eds). Academic Press New York
-
Sonneborn TM (1965) Degeneracy of the genetic code: extent, nature, and genetic implications. In: Bryson V, Vogel HJ (eds) Evolving genes and proteins. Academic Press, New York, pp 377-397
-
(1965)
Evolving Genes and Proteins
, pp. 377-397
-
-
Sonneborn, T.M.1
-
53
-
-
0000839771
-
Synthetic polynucleotides and the amino acid code
-
1:CAS:528:DyaF2cXkvFKitbc%3D
-
Speyer JF, Lengyel P, Basilio C, Wahba AJ, Gardner RS, Ochoa S (1963) Synthetic polynucleotides and the amino acid code. Cold Spring Harb Symp Quant Biol 28:559-567
-
(1963)
Cold Spring Harb Symp Quant Biol
, vol.28
, pp. 559-567
-
-
Speyer, J.F.1
Lengyel, P.2
Basilio, C.3
Wahba, A.J.4
Gardner, R.S.5
Ochoa, S.6
-
54
-
-
0345531141
-
Roles of 5-substituents of tRNA wobble uridines in the recognition of purine-ending codons
-
DOI 10.1093/nar/gkg839
-
Takai K, Yokoyama S (2003) Roles of 5-substituents of tRNA wobble uridines in the recognition of purine-ending codons. Nucleic Acids Res 31:6383-6391 (Pubitemid 37508742)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.22
, pp. 6383-6391
-
-
Takai, K.1
Yokoyama, S.2
-
55
-
-
2942597865
-
Anticodon and wobble evolution
-
DOI 10.1016/j.gene.2004.02.028, PII S0378111904000939
-
Tong KL, Wong JT (2004) Anticodon and wobble evolution. Gene 333:169-177 (Pubitemid 38737363)
-
(2004)
Gene
, vol.333
, Issue.1-2
, pp. 169-177
-
-
Tong, K.-L.1
Wong, J.T.-F.2
-
56
-
-
3142735114
-
Genome update: TRNAS in sequenced microbial genomes
-
Ussery DW, Hallin PF, Lagesen K, Wassenaar TM (2004) Genome Update: tRNAs in sequenced microbial genomes. Microbiology 150:1603-1606 (Pubitemid 38923659)
-
(2004)
Microbiology
, vol.150
, Issue.6
, pp. 1603-1606
-
-
Ussery, D.W.1
Hallin, P.F.2
Lagesen, K.3
Wassenaar, T.M.4
-
57
-
-
0013824051
-
On the evolution of the genetic code
-
5218910 10.1073/pnas.54.6.1546 1:CAS:528:DyaF28Xltlagsg%3D%3D
-
Woese CR (1965) On the evolution of the genetic code. Proc Natl Acad Sci USA 54:1546-1552
-
(1965)
Proc Natl Acad Sci USA
, vol.54
, pp. 1546-1552
-
-
Woese, C.R.1
-
59
-
-
0034053846
-
Aminoacyl-tRNA synthetases, the genetic code, and the evolutionary process
-
Woese CR, Olsen GJ, Ibba M, Söll D (2000) Aminoacyl-tRNA synthetases, the genetic code, and the evolutionary process. Microb Mol Biol Rev 64:202-236 (Pubitemid 30143846)
-
(2000)
Microbiology and Molecular Biology Reviews
, vol.64
, Issue.1
, pp. 202-236
-
-
Woese, C.R.1
Olsen, G.J.2
Ibba, M.3
Soll, D.4
-
60
-
-
0001155613
-
A co-evolution theory of the genetic code
-
1057181 10.1073/pnas.72.5.1909 1:CAS:528:DyaE2MXkt1ertbg%3D
-
Wong JT (1975) A co-evolution theory of the genetic code. Proc Natl Acad Sci USA 72:1909-1912
-
(1975)
Proc Natl Acad Sci USA
, vol.72
, pp. 1909-1912
-
-
Wong, J.T.1
-
61
-
-
17844405021
-
Coevolutlon theory of genetic code at age thirty
-
DOI 10.1002/bies.20208
-
Wong JT (2005) Coevolution theory of the genetic code at age thirty. BioEssays 27:416-425 (Pubitemid 40592598)
-
(2005)
BioEssays
, vol.27
, Issue.4
, pp. 416-425
-
-
Wong, J.T.-F.1
-
62
-
-
34748862349
-
Polyphasic evidence delineating the root of life and roots of biological domains
-
DOI 10.1016/j.gene.2007.07.032, PII S0378111907004039
-
Wong JT, Chen J, Mat WK, Ng SK, Xue H (2007) Polyphasic evidence delineating the root of life and roots of biological domains. Gene 403:39-52 (Pubitemid 47488703)
-
(2007)
Gene
, vol.403
, Issue.1-2
, pp. 39-52
-
-
Wong, J.T.-F.1
Chen, J.2
Mat, W.-K.3
Ng, S.-K.4
Xue, H.5
-
63
-
-
0021861277
-
UGA is read as tryptophan in Mycoplasma capricolum
-
DOI 10.1073/pnas.82.8.2306
-
Yamao F, Muto A, Kawauchi Y, Iwami M, Iwagami S, Azumi Y, Osawa S (1985) UGA is read as tryptophan in Mycoplasma capricolum. Proc Natl Acad Sci USA 82:2306-2309 (Pubitemid 15064476)
-
(1985)
Proceedings of the National Academy of Sciences of the United States of America
, vol.82
, Issue.8
, pp. 2306-2309
-
-
Yamao, F.1
Muto, A.2
Kawauchi, Y.3
-
64
-
-
22244445209
-
Origins of the genetic code: The escaped triplet theory
-
DOI 10.1146/annurev.biochem.74.082803.133119
-
Yarus M, Caporaso JG, Knight R (2005) Origins of the genetic code: the escaped triplet theory. Ann Rev Biochem 74:179-198 (Pubitemid 40995505)
-
(2005)
Annual Review of Biochemistry
, vol.74
, pp. 179-198
-
-
Yarus, M.1
Caporaso, J.G.2
Knight, R.3
|