A new tool for the molecular identification of Culicoides species of the Obsoletus group: The glass slide microarray approach

Medical and Veterinary Entomology

Volumn 26, Issue 1, 2012, Pages 83-91

  Deblauwe, I ^a   de Witte, J C ^a   de Deken, G ^a   de Deken, R ^a   Madder, M ^a,b   van Erk, S ^a   Hoza, F A ^a   Lathouwers, D ^a   Geysen, D ^a  

^a INSTITUTE OF TROPICAL MEDICINE   (Belgium)

^b UNIVERSITY OF PRETORIA   (South Africa)

Author keywords

Bluetongue; Culicoides obsoletus s.l.; Identification; Internal transcribed spacer 1; Microarray; Molecular detection; Probe hybridization; Vector

Indexed keywords

RIBOSOMAL SPACER DNA;

HYBRIDIZATION; IDENTIFICATION KEY; INSECT; MOLECULAR ANALYSIS; MORPHOLOGY; POLYMERASE CHAIN REACTION; SAMPLING; SPATIOTEMPORAL ANALYSIS; VIRUS;

ANIMAL; ARTICLE; CERATOPOGONIDAE; CLASSIFICATION; DNA MICROARRAY; FEMALE; GENETICS; METHODOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; SENSITIVITY AND SPECIFICITY; SPECIES DIFFERENCE;

ANIMALS; BASE SEQUENCE; CERATOPOGONIDAE; DNA, RIBOSOMAL SPACER; FEMALE; MOLECULAR SEQUENCE DATA; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PHYLOGENY; SENSITIVITY AND SPECIFICITY; SPECIES SPECIFICITY;

WESTERN EUROPE;

BLUETONGUE VIRUS; BLUETONGUE VIRUS 8; CERATOPOGONIDAE; CULICOIDES OBSOLETUS; DIPTERA;

EID: 84856231389     PISSN: 0269283X     EISSN: 13652915     Source Type: Journal    
DOI: 10.1111/j.1365-2915.2011.00979.x     Document Type: Article

References (34)

1. Augot, D., Sauvage, F., Jouet, D. et al. (2010) Discrimination of Culicoides obsoletus and Culicoides scoticus, potential bluetongue vectors, by morphometrical and mitochondrial cytochrome oxidase subunit I analysis. Infection, Genetics and Evolution, 10, 629-637.
2. Campbell, J.A. & Pelham-Clinton, E.C. (1960) A taxonomic review of the British species of Culicoides Latreille (Diptera: Ceratopogonidae). Proceedings of the Royal Society of Edinburgh B, 67, 181-302.
3. Caracappa, S., Torina, A., Guercio, A. et al. (2003) Identification of a novel bluetongue virus vector species of Culicoides in Sicily. Veterinary Record, 153, 71-74.
4. Carpenter, S., Lunt, H.L., Arav, D., Venter, G.J. & Mellor, P.S. (2006) Oral susceptibility to bluetongue virus of Culicoides (Diptera: Ceratopogonidae) from the United Kingdom. Journal of Medical Entomology, 43, 73-78.
5. Carpenter, S., McArthur, C., Selby, R. et al. (2008) Experimental infection studies of U.K. Culicoides species midges with bluetongue virus serotypes 8 and 9. Veterinary Record, 163, 589-592.
6. Carpenter, S., Wilson, A. & Mellor, P.S. (2009) Culicoides and the emergence of bluetongue virus in northern Europe. Trends in Microbiology, 17, 172-178.
7. Cêtre-Sossah, C., Baldet, T., Delecolle, J.C., Mathieu, B., Perrin, A., Grillet, C. & Albina, E. (2004) Molecular detection of Culicoides spp. and Culicoides imicola, the principal vector of bluetongue (BT) and African horse sickness (AHS) in Africa and Europe. Veterinary Research, 35, 325-337.
8. Cêtre-Sossah, C., Mathieu, B., Setier-Rio, M.-L., Grillet, C., Baldet, T., Delécolle, J.-C. & Albina, E. (2008) Development and evaluation of a real-time quantitative PCR assay for Culicoides imicola, one of the main vectors of bluetongue (BT) and African horse sickness (AHS) in Africa and Europe. Research in Veterinary Science, 85, 372-382.
9. Cêtre-Sossah, C., Balenghien, T., Martinez, D. et al. (2010) Strengthening cooperation on vector-borne diseases in Europe. Veterinary Record, 166, 386-387.
10. Delécolle, J.C. (1985) Nouvelle contribution à l'étude systématique et iconographique des espèces du genre Culicoides (Diptera: Ceratopogonidae) du Nord-Est de la France. PhD Dissertation. L'Unité de Formation et de Recherche des Sciences de la Vie et de la Terre, Université Louis Pasteur de Strasbourg, Strasbourg.
11. De Liberato, C., Scavia, G., Lorenzetti, R. et al. (2005) Identification of Culicoides obsoletus (Diptera: Ceratopogonidae) as a vector of bluetongue virus in central Italy. Veterinary Record, 156, 301-304.
12. De Witte, J.C. (2007) DNA sequence-specific method for analysis of Theileria parva diversity using microarrays. MSc Thesis. Institute of Tropical Medicine, Antwerp.
13. Gomulski, L.M., Meiswinkel, R., Delécolle, J.-C., Goffredo, M. & Gasperi, G. (2006) Phylogeny of the subgenus Culicoides and related species in Italy, inferred from internal transcribed spacer 2 ribosomal DNA sequences. Medical and Veterinary Entomology, 20, 229-238.
14. Guo, Z., Guilfoyle, R.A., Thiel, A.J., Wang, R. & Smith, L.M. (1994) Direct fluorescence analysis of genetic polymorphisms by hybridization with oligonucleotide arrays on glass supports. Nucleic Acids Research, 22, 5456-5465.
15. Hall, T. (2007) BioEdit v7.0.9. [Accessed 16 January 2009].
16. Hoffmann, B., Bauer, B., Bauer, C. et al. (2009) Monitoring of putative vectors of bluetongue virus serotype 8, Germany. Emerging Infectious Diseases, 15, 1481-1484.
17. Kibbe, W.A. (2007) OligoCalc: an online oligonucleotide properties calculator. Nucleic Acids Research, 35, 43-46.
18. Kiehl, E., Walldorf, V., Klimpel, S., Al Quraishy, S. & Mehlhorn, H. (2009) The European vectors of bluetongue virus: are there species complexes, single species or races in Culicoides obsoletus and C. pulicaris detectable by sequencing ITS-1, ITS-2 and 18S-rDNA? Parasitology Research, 105, 331-336.
19. Linton, Y.-M., Mordue Luntz, A.J., Cruickshank, R.H., Meiswinkel, R., Mellor, P.S. & Dallas, J.F. (2002) Phylogenetic analysis of the mitochondrial cytochrome oxidase subunit I gene of five species of the Culicoides imicola species complex. Medical and Veterinary Entomology, 16, 139-146.
20. Mathieu, B., Perrin, A., Baldet, T., Delécolle, J.-C., Albina, E. & Cêtre-Sossah, C. (2007) Molecular identification of Western European species of obsoletus complex (Diptera: Ceratopogonidae) by an internal transcribed spacer-1 rDNA multiplex polymerase chain reaction assay. Journal of Medical Entomology, 44, 1019-1025.
21. Meiswinkel, R., Baldet, T., De Deken, R., Takken, W., Delécolle, J.-C. & Mellor, P.S. (2008) The 2006 outbreak of bluetongue in northern Europe-the entomological perspective. Preventive Veterinary Medicine, 87, 55-63.
22. Mellor, P.S. & Pitzolis, G. (1979) Observations on breeding sites and light-trap collections of Culicoides during an outbreak of bluetongue in Cyprus. Bulletin of Entomological Research, 69, 229-234.
23. Mellor, P.S. & Wittmann, E.J. (2002) Bluetongue virus in the Mediterranean basin 1998-2001. Veterinary Journal, 164, 20-37.
24. Nolan, D.V., Carpenter, S., Barber, J., Mellor, P.S., Dallas, J.F., Mordue Luntz, A.J. & Piertney, S.B. (2007) Rapid diagnostic PCR assays for members of the Culicoides obsoletus and Culicoides pulicaris species complexes, implicated vectors of bluetongue virus in Europe. Veterinary Microbiology, 124, 82-94.
25. Pagès, N. & Sarto i Monteys, V. (2005) Differentiation of Culicoides obsoletus and Culicoides scoticus (Diptera: Ceratopogonidae) based on mitochondrial cytochrome oxidase subunit I. Journal of Medical Entomology, 42, 1026-1034.
26. Pagès, N., Munoz-Munoz, F., Talavera, S., Sarto, V., Lorca, C. & Nunez, J.I. (2009) Identification of cryptic species of Culicoides (Diptera: Ceratopogonidae) in the subgenus Culicoides and development of species-specific PCR assays based on barcode regions. Veterinary Parasitology, 165, 298-310.
27. Peplies, J., Glockner, F.O. & Amann, R. (2003) Optimization strategies for DNA microarray-based detection of bacteria with 16S rRNA-targeting oligonucleotide probes. Applied and Environmental Microbiology, 69, 1397-1407.
28. Schena, M., Shalon, D., Davis, R.W. & Brown, P.O. (1995) Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science, 270, 467-470.
29. Schwenkenbecher, J.M., Mordue Luntz, A.J., Switek, K. & Piertney, S.B. (2009) Discrimination of Culicoides midge larvae using multiplex polymerase chain reaction assays based on DNA sequence variation at the mitochondrial cytochrome C oxidase I gene. Journal of Medical Entomology, 46, 610-614.
30. Tabachnick, W.J. (2004) Culicoides and the global epidemiology of bluetongue virus infection. Veterinaria Italiana, 40, 145-150.
31. Vanbinst, T., Vandenbussche, F., Vandemeulebroucke, E. et al. (2009) Bluetongue virus detection by real-time RT-PCR in Culicoides captured during the 2006 epizootic in Belgium and development of an internal control export. Transboundary and Emerging Diseases, 56, 170-177.
32. Venter, G.J., Labuschagne, K., Hermanides, K.G., Boikanyo, S.N.B., Majatladi, D.M. & Morey, L. (2009) Comparison of the efficiency of five suction light traps under field conditions in South Africa for the collection of Culicoides species. Veterinary Parasitology, 166, 299-307.
33. Wilson, A.J. & Mellor, P.S. (2009) Bluetongue in Europe: past, present and future. Philosophical Transactions of the Royal Society B, 364, 2669-2681.
34. Zhou, J. & Thompson, D.K. (2004) Microarray technology and applications in environmental microbiology. Advances in Agronomy, Vol. 82 (ed. by D. L. Sparks), pp. 183-270. Elsevier, San Diego, CA.