Hierarchically organized bimolecular ladder network exhibiting guided one-dimensional diffusion

ACS Nano

Volumn 6, Issue 1, 2012, Pages 549-556

  Makoudi, Younes ^a   Arras, Emmanuel ^a   Kepčija, Nenad ^a   Krenner, Wolfgang ^a   Klyatskaya, Svetlana ^b   Klappenberger, Florian ^a   Ruben, Mario ^b,c   Seitsonen, Ari Paavo ^d   Barth, Johannes V ^a  

^a TECHNICAL UNIVERSITY OF MUNICH   (Germany)

^b KARLSRUHE INSTITUTE OF TECHNOLOGY   (Germany)

^c UNIVERSITÉ DE STRASBOURG   (France)

^d UNIVERSITY OF ZURICH   (Switzerland)

Author keywords

density functional theory (DFT); hierarchic bonding; molecular dynamics; scanning tunneling microscopy (STM); self assembly; supramolecular chemistry

Indexed keywords

AB INITIO; AG(111) SURFACE; CONTROLLED TEMPERATURE; DIFFUSION PATHWAYS; NETWORK FORMATION; SCANNING TUNNELING MICROSCOPY (STM); THEORETICAL INVESTIGATIONS; TWO-STEP PROTOCOL;

AMIDES; BINDING ENERGY; DIFFUSION; DYNAMICS; MOLECULAR DYNAMICS; SUPRAMOLECULAR CHEMISTRY;

SCANNING TUNNELING MICROSCOPY;

BIOPOLYMER; NANOMATERIAL;

ARTICLE; CHEMICAL MODEL; CHEMICAL STRUCTURE; CHEMISTRY; COMPUTER SIMULATION; CRYSTALLIZATION; DIFFUSION; METHODOLOGY; PARTICLE SIZE; ULTRASTRUCTURE;

BIOPOLYMERS; COMPUTER SIMULATION; CRYSTALLIZATION; DIFFUSION; MODELS, CHEMICAL; MODELS, MOLECULAR; NANOSTRUCTURES; PARTICLE SIZE;

EID: 84856185047     PISSN: 19360851     EISSN: 1936086X     Source Type: Journal    
DOI: 10.1021/nn203963a     Document Type: Article

References (46)

1. Lindsey, J. S. Self-Assembly in Synthetic Routes to Molecular Devices-Biological Principles and Chemical Perspectives-A Review New J. Chem. 1991, 15, 153-180
2. Philp, D.; Stoddart, J. F. Self-Assembly in Natural and Unnatural Systems Angew. Chem., Int. Ed. Engl. 1996, 35, 1155-1196
3. Elemans, J. A. A. W.; Rowan, A. E.; Nolte, R. J. M. Mastering Molecular Matter. Supramolecular Architectures by Hierarchical Self-Assembly J. Mater. Chem. 2003, 13, 2661-2670
4. Barth, J. V.; Costantini, G.; Kern, K. Engineering Atomic and Molecular Nanostructures at Surfaces Nature 2005, 437, 671-679
5. De Feyter, S.; De Schryver, F. C. Two-Dimensional Supramolecular Self-Assembly Probed by Scanning Tunneling Microscopy Chem. Soc. Rev. 2003, 32, 393-393
6. Barth, J. V. Molecular Architectonic on Metal Surfaces Annu. Rev. Phys. Chem. 2007, 58, 375-407
7. Elemans, J.; Lei, S.; De Feyter, S. Molecular and Supramolecular Networks on Surfaces: From Two-Dimensional Crystal Engineering to Reactivity Angew. Chem., Int. Ed. 2009, 48, 7298-7332
8. Clair, S.; Pons, S.; Brune, H.; Kern, K.; Barth, J. V. Mesoscopic Metallosupramolecular Texturing by Hierarchic Assembly Angew. Chem., Int. Ed. 2005, 44, 7294-7297
9. Blüm, M.-C.; Ćavar, E.; Pivetta, M.; Patthey, F.; Schneider, W.-D. Conservation of Chirality in a Hierarchical Supramolecular Self-Assembled Structure with Pentagonal Symmetry Angew. Chem., Int. Ed. 2005, 44, 5334-5337
10. Otero, R.; Schöck, M.; Molina, L. M.; Laegsgaard, E.; Stensgaard, I.; Hammer, B.; Besenbacher, F. Guanine Quartet Networks Stabilized by Cooperative Hydrogen Bonds Angew. Chem., Int. Ed. 2005, 44, 2270-2275
11. Staniec, P. A.; Perdigao, L. M. A.; Saywell, A.; Champness, N. R.; Beton, P. H. Hierarchical Organisation on a Two-Dimensional Supramolecular Network ChemPhysChem 2007, 8, 2177-2181
12. Schlickum, U.; Decker, R.; Klappenberger, F.; Zoppellaro, G.; Klyatskaya, S.; Auwärter, W.; Neppl, S.; Kern, K.; Brune, H.; Ruben, M. et al. Chiral Kagomé Lattice from Simple Ditopic Molecular Bricks J. Am. Chem. Soc. 2008, 130, 11778-11782
13. Ruben, M.; Ziener, U.; Lehn, J. M.; Ksenofontov, V.; Gutlich, P.; Vaughan, G. B. M. Hierarchical Self-Assembly of Supramolecular Spintronic Modules into 1D- and 2D-Architectures with Emergence of Magnetic Properties Chem.-Eur. J. 2005, 11, 94-100
14. Spillmann, H.; Dmitriev, A.; Lin, N.; Messina, P.; Barth, J. V.; Kern, K. Hierarchical Assembly of Two-Dimensional Homochiral Nanocavity Arrays J. Am. Chem. Soc. 2003, 125, 10725-10728
15. Meier, C.; Landfester, K.; Kunzel, D.; Markert, T.; Gross, A.; Ziener, U. Hierarchically Self-Assembled Host-Guest Network at the Solid-Liquid Interface for Single-Molecule Manipulation Angew. Chem., Int. Ed. 2008, 47, 3821-3825
16. de Wild, M.; Berner, S.; Suzuki, H.; Yanagi, H.; Schlettwein, D.; Ivan, S.; Baratoff, A.; Guentherodt, H. J.; Jung, T. A. A Novel Route to Molecular Self-assembly: Self-Intermixed Monolayer Phases ChemPhysChem 2002, 3, 881-885
17. Ruiz-Osés, M.; González-Lakunza, N.; Silanes, I.; Gourdon, A.; Arnau, A.; Ortega, J. E. Self-Assembly of Heterogeneous Supramolecular Structures with Uniaxial Anisotropy J. Phys. Chem. B 2006, 110, 25573-25577
18. Theobald, J. A.; Oxtoby, N. S.; Phillips, M. A.; Champness, N. R.; Beton, P. H. Controlling Molecular Deposition and Layer Structure with Supramolecular Surface Assemblies Nature 2003, 424, 1029-1031
19. Cañas-Ventura, M. E.; Xiao, W.; Wasserfallen, D.; Müllen, K.; Brune, H.; Barth, J. V.; Fasel, R. Self-Assembly of Periodic Bicomponent Wires and Ribbons Angew. Chem., Int. Ed. 2007, 46, 1814-1818
20. Barrena, E.; de Oteyza, D. G.; Dosch, H.; Wakayama, Y. 2D Supramolecular Self-Assembly of Binary Organic Monolayers ChemPhysChem 2007, 8, 1915-1918
21. Hipps, K. W.; Scudiero, L.; Barlow, D. E.; Cooke, M. P. A Self-Organized 2-Dimensional Bifunctional Structure Formed by Supramolecular Design J. Am. Chem. Soc. 2002, 124, 2126-2127
22. Klappenberger, F.; Cañas-Ventura, M. E.; Clair, S.; Pons, S.; Schlickum, U.; Qu, Z. R.; Strunskus, T.; Comisso, A.; Wöll, C.; Brune, H. et al. Does the Surface Matter? Hydrogen Bonded Chain Formation of an Oxalic Amide Derivative in Two and Three Dimensional Environment ChemPhysChem 2008, 9, 2522-2530
23. Kühne, D.; Klappenberger, F.; Decker, R.; Schlickum, U.; Brune, H.; Klyatskaya, S.; Ruben, M.; Barth, J. V. Self-Assembly of Nanoporous Chiral Networks with Varying Symmetry from Sexiphenyl-Dicarbonitrile on Ag(111) J. Phys. Chem. C 2009, 113, 17851-17859
24. Krenner, W.; Klappenberger, F.; Kühne, D.; Diller, K.; Qu, Z.-R.; Ruben, M.; Barth, J. V. Positioning of Single Co Atoms Steered by a Self-Assembled Organic Molecular Template J. Phys. Chem. Lett. 2011, 2, 1639-1645
25. Klappenberger, F.; Kühne, D.; Krenner, W.; Silanes, I.; Arnau, A.; Garcia de Abajo, F. J.; Klyatskaya, S.; Ruben, M.; Barth, J. V. Dichotomous Array of Chiral Quantum Corrals by a Self-Assembled Nanoporous Kagome Network Nano Lett. 2009, 9, 3509-3514
26. Henningsen, N.; Rurali, R.; Franke, K. J.; Fernández-Torrente, I.; Pascual, J. I. Trans to Cis Isomerization of an Azobenzene Derivative on a Cu(100) Surface Appl. Phys. A: Mater. Sci. Process. 2008, 93, 241-246
27. Böhringer, M.; Morgenstern, K.; Schneider, W. D.; Berndt, R.; Mauri, F.; De Vita, A.; Car, R. Two-Dimensional Self-Assembly of Supramolecular Clusters and Chains Phys. Rev. Lett. 1999, 83, 324-327
28. Dmitriev, A.; Lin, N.; Weckesser, J.; Barth, J. V.; Kern, K. Supramolecular Assemblies of Trimesic Acid on a Cu(100) Surface J. Phys. Chem. B 2002, 106, 6907-6912
29. Weckesser, J.; Barth, J. V.; Kern, K. Direct Observation of Surface Diffusion of Large Organic Molecules at Metal Surfaces: PVBA on Pd(110) J. Chem. Phys. 1999, 110, 5351-5354
30. Cañas-Ventura, M. E.; Klappenberger, F.; Clair, S.; Pons, S.; Kern, K.; Brune, H.; Strunskus, T.; Wöll, C.; Fasel, R.; Barth, J. V. Coexistence of One- and Two-Dimensional Supramolecular Assemblies of Terephthalic Acid on Pd(111) Due to Self-Limiting Deprotonation J. Chem. Phys. 2006, 125, 184710
31. Kühne, D.; Klappenberger, F.; Krenner, W.; Klyatskaya, S.; Ruben, M.; Barth, V. J. Rotational and Constitutional Dynamics of Caged Supramolecules Proc. Natl. Acad. Sci. U.S.A. 2010, 50, 21332-21336
32. Barth, J. V. Transport of adsorbates at metal surfaces: From thermal migration to hot precursors Surf. Sci. Rep. 2000, 40, 75-149
33. Barth, J. V.; Weckesser, J.; Cai, C.; Günter, P.; Bürgi, L.; Jeandupeux, O.; Kern, K. Building Supramolecular Nanostructures at Surfaces by Hydrogen Bonding Angew. Chem., Int. Ed. 2000, 39, 1230-1234
34. Schiffrin, A.; Riemann, A.; Auwärter, W.; Pennec, Y.; Weber-Bargioni, A.; Cvetko, D.; Cossaro, A.; Morgante, A.; Barth, J. V. Zwitterionic Self-Assembly of l-Methionine Nanogratings on the Ag(111) Surface Proc. Natl. Acad. Sci. U.S.A. 2007, 104, 5279-5284
35. Schiffrin, A.; Reichert, J.; Auwärter, W.; Jahnz, G.; Pennec, Y.; Weber-Bargioni, A.; Stepanyuk, V. S.; Niebergall, L.; Bruno, P.; Barth, J. V. Self-Aligning Atomic Strings in Surface-Supported Biomolecular Gratings Phys. Rev. B 2008, 78, 035424
36. Weckesser, J.; De Vita, A.; Barth, J. V.; Cai, C.; Kern, K. Mesoscopic Correlation of Supramolecular Chirality in One-Dimensional Hydrogen-Bonded Assemblies Phys. Rev. Lett. 2001, 87, 096101
37. Barth, J. V.; Weckesser, J.; Trimarchi, G.; Vladimirova, M.; De Vita, A.; Cai, C.; Brune, H.; Günter, P.; Kern, K. Stereochemical Effects in Supramolecular Self-Assembly at Surfaces: 1-D versus 2-D Enantiomorphic Ordering for PVBA and PEBA on Ag(111) J. Am. Chem. Soc. 2002, 124, 7991-8000
38. Senft, D. C.; Ehrlich, G. Long Jumps in the Surface-Diffusion: One-Dimensional Migration of Isolated Adatoms Phys. Rev. Lett. 1995, 74, 294-297
39. Röder, H.; Hahn, E.; Brune, H.; Bucher, J. P.; Kern, K. Building One-Dimensional and 2-Dimensional Nanostructures by Diffusion-Controlled Aggregation at Surfaces Nature 1993, 366, 141-143
40. Briner, B. G.; Doering, M.; Rust, H.-P.; Bradshaw, A. M. Microscopic Molecular Diffusion Enhanced by Adsorbate Interactions Science 1997, 278, 257-260
41. Schunack, M.; Linderoth, T. R.; Rosei, F.; Laegsgaard, E.; Stensgaard, I.; Besenbacher, F. Long Jumps in the Surface Diffusion of Large Molecules Phys. Rev. Lett. 2002, 88, 156102
42. Kwon, K.-Y.; Wong, K. L.; Pawin, G.; Bartels, L.; Stolbov, S.; Rahman, T. S. Unidirectional Adsorbate Motion on a High-Symmetry Surface: "Walking" Molecules Can Stay the Course Phys. Rev. Lett. 2005, 95, 166101
43. 60 on Pd(110) Phys. Rev. B 2001, 64, 161403
44. Gonze, X.; Rignanese, G.-M.; Verstraete, M.; Beuken, J.-M.; Pouillon, Y.; Caracas, R.; Jollet, F.; Torrent, M.; Zerah, G.; Mikami, M. et al. A Brief Introduction to the ABINIT Software Package Z. Kristallogr. 2005, 220, 558-562
45. Torrent, M.; Jollet, F.; Bottin, F.; Zerah, G.; Gonze, X. Implementation of the Projector Augmented-Wave Method in the ABINIT Code. Application to the Study of Iron Under Pressure Comput. Mater. Sci. 2008, 42, 337-351
46. Klappenberger, F.; Kühne, D.; Marschall, M.; Neppl, S.; Krenner, W.; Nefedov, A.; Strunskus, T.; Fink, K.; Wöll, C.; Klyatskaya, S. et al. Uniform π-System Alignment in Thin Films of Template-Grown Dicarbonitrile-Oligophenyls Adv. Funct. Mater. 2011, 21, 1631-1642