메뉴 건너뛰기




Volumn 17, Issue 2, 2012, Pages 113-127

Application of microbial community profiling and functional gene detection for assessment of natural attenuation of petroleum hydrocarbons in boreal subsurface

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA (MICROORGANISMS);

EID: 84855854727     PISSN: 12396095     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (18)

References (39)
  • 1
    • 0042815050 scopus 로고    scopus 로고
    • Canonical analysis of principal coordinates: A useful method of constrained ordination for ecology
    • Anderson M.J. & Willis T.J. 2003. Canonical analysis of principal coordinates: a useful method of constrained ordination for ecology. Ecology 84: 511-525.
    • (2003) Ecology , vol.84 , pp. 511-525
    • Anderson, M.J.1    Willis, T.J.2
  • 2
    • 33645053483 scopus 로고    scopus 로고
    • Distance-based tests for homogeneity of multivariate dispersions
    • Anderson M.J. 2006. Distance-based tests for homogeneity of multivariate dispersions. Biometrics 62: 245-253.
    • (2006) Biometrics , vol.62 , pp. 245-253
    • Anderson, M.J.1
  • 5
    • 0037641131 scopus 로고    scopus 로고
    • Detection and enumeration of aromatic oxygenase genes by multiplex and real-time PCR
    • Baldwin B.R., Nakatsu C.H. & Nies L. 2003. Detection and enumeration of aromatic oxygenase genes by multiplex and real-time PCR. Appl. Environ. Microb. 69: 3350-3358.
    • (2003) Appl. Environ. Microb. , vol.69 , pp. 3350-3358
    • Baldwin, B.R.1    Nakatsu, C.H.2    Nies, L.3
  • 6
    • 77954395530 scopus 로고    scopus 로고
    • Maintenance of phenol hydroxylase genotypes at high diversity in bioreactors exposed to step increases in phenol loading
    • Basile L.A. & Erijman L. 2010. Maintenance of phenol hydroxylase genotypes at high diversity in bioreactors exposed to step increases in phenol loading. FEMS Microbiol. Ecol. 73: 336-348.
    • (2010) FEMS Microbiol. Ecol. , vol.73 , pp. 336-348
    • Basile, L.A.1    Erijman, L.2
  • 7
    • 42249095068 scopus 로고    scopus 로고
    • α) genes from Gram positive and Gram negative bacteria in soil and sediment samples
    • Cébron A., Norini M.-P., Beguiristain T. & Leyval C. 2008. Real-time PCR of PAH-ring hydroxylating dioxygenase (PAH-RHDα) genes from Gram positive and Gram negative bacteria in soil and sediment samples. J. Microbiol. Meth. 73: 148-159.
    • (2008) J. Microbiol. Meth. , vol.73 , pp. 148-159
    • Cébron, A.1    Norini, M.-P.2    Beguiristain, T.3    Leyval, C.4
  • 8
    • 64149125381 scopus 로고    scopus 로고
    • Predicting bioremediation of hydrocarbons: Laboratory to field scale
    • Diplock E.E., Mardlin D.P., Killham K.S. & Paton G.I. 2009. Predicting bioremediation of hydrocarbons: laboratory to field scale. Environ. Pollut. 157: 1831-1840.
    • (2009) Environ. Pollut. , vol.157 , pp. 1831-1840
    • Diplock, E.E.1    Mardlin, D.P.2    Killham, K.S.3    Paton, G.I.4
  • 9
    • 31144440056 scopus 로고    scopus 로고
    • Indicators of petroleum hydrocarbon biodegradation in anaerobic granitic groundwater
    • Eriksson S., Hallbeck L., Ankner T., Abrahamsson K. & Sjöling Å. 2006. Indicators of petroleum hydrocarbon biodegradation in anaerobic granitic groundwater. Geomicrobiol. J. 23: 45-58.
    • (2006) Geomicrobiol. J. , vol.23 , pp. 45-58
    • Eriksson, S.1    Hallbeck, L.2    Ankner, T.3    Abrahamsson, K.4    Sjöling, Å.5
  • 10
    • 12344273619 scopus 로고    scopus 로고
    • Biodegradation efficiency of functionally important populations selected for bio augmentation in phenol- and oil-polluted area
    • Heinaru E., Merimaa M., Viggor S., Lehiste M., Leito I., Truu J. & Heinaru A. 2005. Biodegradation efficiency of functionally important populations selected for bio augmentation in phenol- and oil-polluted area. FEMS Microbiol. Ecol. 51: 363-373.
    • (2005) FEMS Microbiol. Ecol. , vol.51 , pp. 363-373
    • Heinaru, E.1    Merimaa, M.2    Viggor, S.3    Lehiste, M.4    Leito, I.5    Truu, J.6    Heinaru, A.7
  • 13
    • 34547804306 scopus 로고    scopus 로고
    • Natural attenuation of chlorinated solvents: A comparative study
    • Kuchovsky T. & Sracek O. 2007. Natural attenuation of chlorinated solvents: a comparative study. Environ. Geol. 53: 147-157.
    • (2007) Environ. Geol. , vol.53 , pp. 147-157
    • Kuchovsky, T.1    Sracek, O.2
  • 14
    • 33846185425 scopus 로고    scopus 로고
    • Comparative phylogenetic analyses of microbial communities in pristine and hydrocarboncontaminated Alpine soils
    • Labbé D., Margesin R., Schinner F., Whyte L.G. & Greer C.W. 2007. Comparative phylogenetic analyses of microbial communities in pristine and hydrocarboncontaminated Alpine soils. FEMS Microbiol. Ecol. 59: 466-475.
    • (2007) FEMS Microbiol. Ecol. , vol.59 , pp. 466-475
    • Labbé, D.1    Margesin, R.2    Schinner, F.3    Whyte, L.G.4    Greer, C.W.5
  • 15
    • 0038317584 scopus 로고    scopus 로고
    • Characterization of hydrocarbon-degrading microbial populations in contaminated and pristine alpine soils
    • Margesin R., Labbé D., Schinner F., Greer C.W. & Whyte L.G. 2003. Characterization of hydrocarbon-degrading microbial populations in contaminated and pristine alpine soils. Appl. Environ. Microb. 69: 3085-3092.
    • (2003) Appl. Environ. Microb. , vol.69 , pp. 3085-3092
    • Margesin, R.1    Labbé, D.2    Schinner, F.3    Greer, C.W.4    Whyte, L.G.5
  • 17
    • 24644493209 scopus 로고    scopus 로고
    • Degradation of chlorobenzenes by a strain of Acidovorax avanae isolated from a polluted aquifer
    • Monferran M.V., Echenique J.R. & Wunderlin D.A. 2005. Degradation of chlorobenzenes by a strain of Acidovorax avanae isolated from a polluted aquifer. Chemosphere 61: 98-106.
    • (2005) Chemosphere , vol.61 , pp. 98-106
    • Monferran, M.V.1    Echenique, J.R.2    Wunderlin, D.A.3
  • 18
    • 0027460328 scopus 로고
    • Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes encoding for 16S rRNA
    • Muyzer G., de Vaal E. & Underliten A. 1993. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes encoding for 16S rRNA. Appl. Environ. Microb. 59: 695-700.
    • (1993) Appl. Environ. Microb. , vol.59 , pp. 695-700
    • Muyzer, G.1    de Vaal, E.2    Underliten, A.3
  • 19
  • 20
    • 0030805150 scopus 로고    scopus 로고
    • Distribution of bacterioplankton in meromictic lake Sælenvannet, as determined by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA
    • Øvreås L., Forney L., Daae F.E. & Torsvik V. 1997. Distribution of bacterioplankton in meromictic lake Sælenvannet, as determined by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA. Appl. Environ. Microb. 63: 3367-3373.
    • (1997) Appl. Environ. Microb. , vol.63 , pp. 3367-3373
    • Øvreås, L.1    Forney, L.2    Daae, F.E.3    Torsvik, V.4
  • 21
    • 37249055491 scopus 로고    scopus 로고
    • Isolation of gram-positive n-alkane degraders from a hydrocarbon-contaminated Mediterranean shoreline
    • Quatrini P., Scaglione G., De Pasquale C., Riela S. & Puglia A.M. 2008. Isolation of gram-positive n-alkane degraders from a hydrocarbon-contaminated Mediterranean shoreline. J. Appl. Microbiol. 104: 251-259.
    • (2008) J. Appl. Microbiol. , vol.104 , pp. 251-259
    • Quatrini, P.1    Scaglione, G.2    de Pasquale, C.3    Riela, S.4    Puglia, A.M.5
  • 22
    • 33845440338 scopus 로고    scopus 로고
    • Using real-time PCR to assess changes in the hydrocarbon- degrading microbial community in Antarctic soil during bioremediation
    • Powell S.M., Ferguson S.H., Bowman J.P. & Snape I. 2006. Using real-time PCR to assess changes in the hydrocarbon- degrading microbial community in Antarctic soil during bioremediation. Microb. Ecol. 52: 523-532
    • (2006) Microb. Ecol. , vol.52 , pp. 523-532
    • Powell, S.M.1    Ferguson, S.H.2    Bowman, J.P.3    Snape, I.4
  • 23
    • 0036023980 scopus 로고    scopus 로고
    • Natural attenuation: What does the subsurface have in store?
    • Röling W.F.M. & van Verseveld H.W. 2002. Natural attenuation: what does the subsurface have in store? Biodegradation 13: 53-64.
    • (2002) Biodegradation , vol.13 , pp. 53-64
    • Röling, W.F.M.1    van Verseveld, H.W.2
  • 24
    • 0035491310 scopus 로고    scopus 로고
    • Relationships between microbial community structure and hydrochemistry in a landfill leachate-polluted aquifer
    • Röling W.F.M., van Braukelen B.M., Braster M., Lin B. & van Verseveld H.W. 2001. Relationships between microbial community structure and hydrochemistry in a landfill leachate-polluted aquifer. Appl. Environ. Microb. 67: 4619-4629.
    • (2001) Appl. Environ. Microb. , vol.67 , pp. 4619-4629
    • Röling, W.F.M.1    van Braukelen, B.M.2    Braster, M.3    Lin, B.4    van Verseveld, H.W.5
  • 25
    • 1642419126 scopus 로고    scopus 로고
    • Potential for aerobic and anaerobic biodegradation of petroleum hydrocarbons in boreal subsurface
    • Salminen J.M., Tuomi P.M., Suortti A.-M. & Jørgensen K.S. 2004. Potential for aerobic and anaerobic biodegradation of petroleum hydrocarbons in boreal subsurface. Biodegradation 15: 29-39.
    • (2004) Biodegradation , vol.15 , pp. 29-39
    • Salminen, J.M.1    Tuomi, P.M.2    Suortti, A.-M.3    Jørgensen, K.S.4
  • 27
    • 33748551051 scopus 로고    scopus 로고
    • Novel upper metapathway extradiol dioxygenase gene diversity in polluted soil
    • Sipilä T.P., Riisiö H. & Yrjälä K. 2006. Novel upper metapathway extradiol dioxygenase gene diversity in polluted soil. FEMS Microbiol. Ecol. 58: 134-144.
    • (2006) FEMS Microbiol. Ecol. , vol.58 , pp. 134-144
    • Sipilä, T.P.1    Riisiö, H.2    Yrjälä, K.3
  • 28
    • 0034919134 scopus 로고    scopus 로고
    • Proposal of the genus Sphingomonas sensu stricto and three new genera, Sphingobium, Novosphingobium and Sphingopyxis, on the basis of phylogenetic and chemotaxonomic analyses
    • Takeuchi M., Hamana K. & Hiraishi A. 2001. Proposal of the genus Sphingomonas sensu stricto and three new genera, Sphingobium, Novosphingobium and Sphingopyxis, on the basis of phylogenetic and chemotaxonomic analyses. Int. J. Syst. Evol. Micr. 51: 1405-1417.
    • (2001) Int. J. Syst. Evol. Micr. , vol.51 , pp. 1405-1417
    • Takeuchi, M.1    Hamana, K.2    Hiraishi, A.3
  • 30
    • 0037052493 scopus 로고    scopus 로고
    • Procaryotic diversity-magnitude, dynamics, and controlling factors
    • Torsvik V., Oevreaas L. & Thingstad T.F. 2002. Procaryotic diversity-magnitude, dynamics, and controlling factors. Science 296: 1064-1066.
    • (2002) Science , vol.296 , pp. 1064-1066
    • Torsvik, V.1    Oevreaas, L.2    Thingstad, T.F.3
  • 34
    • 44149099809 scopus 로고    scopus 로고
    • Potential for bioremediation of petroleum hydrocarbons in groundwater under cold climate conditions: A review
    • Van Stempvoort D. & Biggar K. 2008. Potential for bioremediation of petroleum hydrocarbons in groundwater under cold climate conditions: a review. Cold Reg. Sci. Technol. 53: 16-41.
    • (2008) Cold Reg. Sci. Technol. , vol.53 , pp. 16-41
    • van Stempvoort, D.1    Biggar, K.2
  • 35
    • 0342844467 scopus 로고    scopus 로고
    • Analyses of the 2,4-dichlorophenoxyacetic acid-degradative plasmid pEST4011 of Achromobacter xylosoxidans subsp denitrificans strain EST4002
    • Vedler E., Kõiv V. & Heinaru A. 2000. Analyses of the 2,4-dichlorophenoxyacetic acid-degradative plasmid pEST4011 of Achromobacter xylosoxidans subsp denitrificans strain EST4002. Gene 255: 281-288.
    • (2000) Gene , vol.255 , pp. 281-288
    • Vedler, E.1    Kõiv, V.2    Heinaru, A.3
  • 36
    • 43049152774 scopus 로고    scopus 로고
    • Isolation, gene detection and solvent tolerance of benzene, toluene and xylene degrading bacteria from nearshore surface water and Pacific Ocean sediment
    • Wang L., Qiao N., Sun F. & Shao Z. 2008. Isolation, gene detection and solvent tolerance of benzene, toluene and xylene degrading bacteria from nearshore surface water and Pacific Ocean sediment. Extremophiles 12: 335-342.
    • (2008) Extremophiles , vol.12 , pp. 335-342
    • Wang, L.1    Qiao, N.2    Sun, F.3    Shao, Z.4
  • 37
    • 0031734089 scopus 로고    scopus 로고
    • Molecular detection, isolation, and physiological characterization of functionally dominant phenoldegrading bacteria in activated sludge
    • Watanabe K., Teramoto M., Futamata H. & Harayama S. 1998. Molecular detection, isolation, and physiological characterization of functionally dominant phenoldegrading bacteria in activated sludge. Appl. Environ. Microb. 64: 4396-4402.
    • (1998) Appl. Environ. Microb. , vol.64 , pp. 4396-4402
    • Watanabe, K.1    Teramoto, M.2    Futamata, H.3    Harayama, S.4
  • 39
    • 18844458853 scopus 로고    scopus 로고
    • Isolation and taxonomic affiliation of N-heterocyclic aromatic hydrocarbon-transforming bacteria
    • Willumsen P.A., Johansen J.F., Karlson U. & Hansen B.M. 2005. Isolation and taxonomic affiliation of N-heterocyclic aromatic hydrocarbon-transforming bacteria. Appl. Microbiol. Biot. 67: 420-428.
    • (2005) Appl. Microbiol. Biot. , vol.67 , pp. 420-428
    • Willumsen, P.A.1    Johansen, J.F.2    Karlson, U.3    Hansen, B.M.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.