메뉴 건너뛰기




Volumn 7, Issue 1, 2012, Pages

Genetic evidence of tiger population structure and migration within an isolated and fragmented landscape in northwest India

Author keywords

[No Author keywords available]

Indexed keywords

DNA;

EID: 84855698563     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0029827     Document Type: Article
Times cited : (58)

References (60)
  • 4
    • 84855703160 scopus 로고    scopus 로고
    • Reconciling the needs of conservation and local communities: Global Environment Facility support for tiger conservation in India
    • In: Seidensticker J, Christie S, Jackson P, editors, Cambridge University Press
    • MacKinnon K, Mishra H, Mott J, (1999) Reconciling the needs of conservation and local communities: Global Environment Facility support for tiger conservation in India. In: Seidensticker J, Christie S, Jackson P, editors. Riding the Tiger. Cambridge University Press.
    • (1999) Riding the Tiger
    • MacKinnon, K.1    Mishra, H.2    Mott, J.3
  • 5
    • 36549063719 scopus 로고    scopus 로고
    • Where can tigers persist in the future? A landscape-scale, density-based population model for the Indian subcontinent
    • Ranganathan J, Chan KMA, Karanth KU, David Smith JL, (2008) Where can tigers persist in the future? A landscape-scale, density-based population model for the Indian subcontinent. Biological Conservation 141: 67-77.
    • (2008) Biological Conservation , vol.141 , pp. 67-77
    • Ranganathan, J.1    Chan, K.M.A.2    Karanth, K.U.3    David Smith, J.L.4
  • 7
    • 33847637591 scopus 로고    scopus 로고
    • Preparations for the reintroduction of Asiatic lion Panthera leo persica in to Kuno Wildlife Sanctuary, Madhya Pradesh, India
    • Johnsingh AJT, Goyal SP, Qureshi Q, (2007) Preparations for the reintroduction of Asiatic lion Panthera leo persica in to Kuno Wildlife Sanctuary, Madhya Pradesh, India. Oryx 41: 93-96.
    • (2007) Oryx , vol.41 , pp. 93-96
    • Johnsingh, A.J.T.1    Goyal, S.P.2    Qureshi, Q.3
  • 8
    • 0027871543 scopus 로고
    • The Role of Dispersal in Structuring the Chitwan Tiger Population
    • Smith JLD, (1993) The Role of Dispersal in Structuring the Chitwan Tiger Population. Behaviour 124: 165-195.
    • (1993) Behaviour , vol.124 , pp. 165-195
    • Smith, J.L.D.1
  • 10
    • 33845389490 scopus 로고    scopus 로고
    • Assessing tiger population dynamics using photographic capture-recapture sampling
    • Karanth KU, Nichols JD, Kumar NS, Hines JE, (2006) Assessing tiger population dynamics using photographic capture-recapture sampling. Ecology 87: 2925-2937.
    • (2006) Ecology , vol.87 , pp. 2925-2937
    • Karanth, K.U.1    Nichols, J.D.2    Kumar, N.S.3    Hines, J.E.4
  • 11
  • 12
    • 34447114482 scopus 로고    scopus 로고
    • Temporal changes in giant panda habitat connectivity across boundaries of Wolong Nature Reserve, China
    • Vina A, Bearer S, Chen XD, He G, Linderman M, et al. (2007) Temporal changes in giant panda habitat connectivity across boundaries of Wolong Nature Reserve, China. Ecological Applications 17: 1019-1030.
    • (2007) Ecological Applications , vol.17 , pp. 1019-1030
    • Vina, A.1    Bearer, S.2    Chen, X.D.3    He, G.4    Linderman, M.5
  • 13
    • 34447133495 scopus 로고    scopus 로고
    • Biodiversity consequences of alternative future land use scenarios in Greater Yellowstone
    • Gude PH, Hansen AJ, Jones DA, (2007) Biodiversity consequences of alternative future land use scenarios in Greater Yellowstone. Ecological Applications 17: 1004-1018.
    • (2007) Ecological Applications , vol.17 , pp. 1004-1018
    • Gude, P.H.1    Hansen, A.J.2    Jones, D.A.3
  • 14
    • 34447126884 scopus 로고    scopus 로고
    • Ecological mechanisms linking protected areas to surrounding lands
    • Hansen AJ, DeFries R, (2007) Ecological mechanisms linking protected areas to surrounding lands. Ecological Applications 17: 974-988.
    • (2007) Ecological Applications , vol.17 , pp. 974-988
    • Hansen, A.J.1    DeFries, R.2
  • 15
    • 33846528664 scopus 로고    scopus 로고
    • Genetic analysis reveals population structure and recent migration within the highly fragmented range of the Cross River gorilla
    • Bergl RA, Vigilant L, (2007) Genetic analysis reveals population structure and recent migration within the highly fragmented range of the Cross River gorilla. Molecular Ecology 16: 501-516.
    • (2007) Molecular Ecology , vol.16 , pp. 501-516
    • Bergl, R.A.1    Vigilant, L.2
  • 16
    • 1642351065 scopus 로고    scopus 로고
    • Habitat separation among ungulates in dry tropical forests of Ranthambhore national park, Rajasthan
    • Bagchi S, Goyal SP, Sankar K, (2003) Habitat separation among ungulates in dry tropical forests of Ranthambhore national park, Rajasthan. Tropical Ecology 44: 177-183.
    • (2003) Tropical Ecology , vol.44 , pp. 177-183
    • Bagchi, S.1    Goyal, S.P.2    Sankar, K.3
  • 17
    • 78149496665 scopus 로고    scopus 로고
    • Interactions between protected areas and their surroundings in human-dominated tropical landscapes
    • DeFries R, Karanth KK, Pareeth S, (2010) Interactions between protected areas and their surroundings in human-dominated tropical landscapes. Biological Conservation 143: 2870-2880.
    • (2010) Biological Conservation , vol.143 , pp. 2870-2880
    • DeFries, R.1    Karanth, K.K.2    Pareeth, S.3
  • 18
    • 9644303029 scopus 로고    scopus 로고
    • A novel method for collection and preservation of faeces for genetic studies
    • Roeder AD, Archer FI, Poinar HN, Morin PA, (2004) A novel method for collection and preservation of faeces for genetic studies. Molecular Ecology Notes 4: 761-764.
    • (2004) Molecular Ecology Notes , vol.4 , pp. 761-764
    • Roeder, A.D.1    Archer, F.I.2    Poinar, H.N.3    Morin, P.A.4
  • 19
    • 0031105089 scopus 로고    scopus 로고
    • Molecular Scatology: the use of molecular genetic analysis to assign species, sex and individual identity to seal faeces
    • Reed JZ, Tollit DJ, Thompson P, Amos W, (1997) Molecular Scatology: the use of molecular genetic analysis to assign species, sex and individual identity to seal faeces. Molecular Ecology 6: 225-234.
    • (1997) Molecular Ecology , vol.6 , pp. 225-234
    • Reed, J.Z.1    Tollit, D.J.2    Thompson, P.3    Amos, W.4
  • 20
    • 33750981226 scopus 로고    scopus 로고
    • Genotyping faecal samples of Bengal tiger Panthera tigris tigris for population estimation: A pilot study
    • Bhagavatula J, Singh L, (2006) Genotyping faecal samples of Bengal tiger Panthera tigris tigris for population estimation: A pilot study. BMC Genetics 7: 48.
    • (2006) BMC Genetics , vol.7 , pp. 48
    • Bhagavatula, J.1    Singh, L.2
  • 21
    • 0034915201 scopus 로고    scopus 로고
    • Quantitative polymerase chain reaction analysis of DNA from noninvasive samples for accurate microsatellite genotyping of wild chimpanzees (Pan troglodytes verus)
    • Morin PA, Chambers KE, Boesch C, Vigilant L, (2001) Quantitative polymerase chain reaction analysis of DNA from noninvasive samples for accurate microsatellite genotyping of wild chimpanzees (Pan troglodytes verus). Molecular Ecology 10: 1835-1844.
    • (2001) Molecular Ecology , vol.10 , pp. 1835-1844
    • Morin, P.A.1    Chambers, K.E.2    Boesch, C.3    Vigilant, L.4
  • 23
    • 58949083369 scopus 로고    scopus 로고
    • Two-step multiplex polymerase chain reaction improves the speed and accuracy of genotyping using DNA from noninvasive and museum samples
    • Arandjelovic M, Guschanski K, Schubert G, Harris TR, Thalmann O, et al. (2009) Two-step multiplex polymerase chain reaction improves the speed and accuracy of genotyping using DNA from noninvasive and museum samples. Molecular Ecology Research 9: 28-36.
    • (2009) Molecular Ecology Research , vol.9 , pp. 28-36
    • Arandjelovic, M.1    Guschanski, K.2    Schubert, G.3    Harris, T.R.4    Thalmann, O.5
  • 25
    • 0032077236 scopus 로고    scopus 로고
    • Statistical confidence for likelihood-based paternity inference in natural populations
    • Marshall TC, Slate J, Kruuk LEB, Pemberton JM, (1998) Statistical confidence for likelihood-based paternity inference in natural populations. Molecular Ecology 7: 639-655.
    • (1998) Molecular Ecology , vol.7 , pp. 639-655
    • Marshall, T.C.1    Slate, J.2    Kruuk, L.E.B.3    Pemberton, J.M.4
  • 26
    • 33847074909 scopus 로고    scopus 로고
    • Revising how the computer program CERVUS accommodates genotyping error increases success in paternity assignment
    • Kalinowski ST, Taper ML, Marshall TC, (2007) Revising how the computer program CERVUS accommodates genotyping error increases success in paternity assignment. Molecular Ecology 16: 1099-1006.
    • (2007) Molecular Ecology , vol.16 , pp. 1099-1106
    • Kalinowski, S.T.1    Taper, M.L.2    Marshall, T.C.3
  • 27
    • 85007320774 scopus 로고
    • FSTAT (version1.2). A computer programme to calculate F-statistics
    • Goudet J, (1995) FSTAT (version1.2). A computer programme to calculate F-statistics. Journal of Heredity 86: 485-486.
    • (1995) Journal of Heredity , vol.86 , pp. 485-486
    • Goudet, J.1
  • 28
    • 0021566877 scopus 로고
    • Estimating F-statistics for the analysis of population structure
    • Weir BS, Cockerham CC, (1984) Estimating F-statistics for the analysis of population structure. Evolution 38: 1358-1370.
    • (1984) Evolution , vol.38 , pp. 1358-1370
    • Weir, B.S.1    Cockerham, C.C.2
  • 29
    • 0003470431 scopus 로고
    • Variability within and among Natural Populations, University of Chicago Press, University of Chicago
    • Wright S, (1978) Evolution and the genetics of populations, Vol. 4. Variability within and among Natural Populations, University of Chicago Press, University of Chicago.
    • (1978) Evolution and the genetics of populations , vol.4
    • Wright, S.1
  • 30
    • 33644871292 scopus 로고    scopus 로고
    • GenAlEx 6: genetic analysis in Excel. Population genetic software for teaching and research
    • Peakall R, Smouse PE, (2006) GenAlEx 6: genetic analysis in Excel. Population genetic software for teaching and research. Molecular Ecology Notes 6: 288-295.
    • (2006) Molecular Ecology Notes , vol.6 , pp. 288-295
    • Peakall, R.1    Smouse, P.E.2
  • 32
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens M, Donnelly P, (2000) Inference of population structure using multilocus genotype data. Genetics 155: 945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 33
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study
    • Evanno G, Regnaut S, Goudet J, (2005) Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Molecular Ecology 14: 2611-2620.
    • (2005) Molecular Ecology , vol.14 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 34
    • 0032711229 scopus 로고    scopus 로고
    • New methods employing multilocus genotypes to select or exclude populations as origins of individuals
    • Cornuet JM, Piry S, Luikart G, Estoup A, Solignac M, (1999) New methods employing multilocus genotypes to select or exclude populations as origins of individuals. Genetics 153: 1989-2000.
    • (1999) Genetics , vol.153 , pp. 1989-2000
    • Cornuet, J.M.1    Piry, S.2    Luikart, G.3    Estoup, A.4    Solignac, M.5
  • 35
    • 1642442709 scopus 로고    scopus 로고
    • Genetic assignment methods for the direct, real-time estimation of migration rate: a simulation-based exploration of accuracy and power
    • Paetkau D, Slade R, Burden M, Estoup A, (2004) Genetic assignment methods for the direct, real-time estimation of migration rate: a simulation-based exploration of accuracy and power. Molecular Ecology 13: 55-65.
    • (2004) Molecular Ecology , vol.13 , pp. 55-65
    • Paetkau, D.1    Slade, R.2    Burden, M.3    Estoup, A.4
  • 37
    • 6044264968 scopus 로고    scopus 로고
    • GeneClass 2: A software for genetic assignment and first-generation migrant detection
    • Piry S, Alapetite A, Cornuet JM, Paetkau D, Baudouin L, et al. (2004) GeneClass 2: A software for genetic assignment and first-generation migrant detection. Journal of Heredity 95: 536-539.
    • (2004) Journal of Heredity , vol.95 , pp. 536-539
    • Piry, S.1    Alapetite, A.2    Cornuet, J.M.3    Paetkau, D.4    Baudouin, L.5
  • 39
    • 13844320121 scopus 로고    scopus 로고
    • Assignment methods: matching biological questions with appropriate techniques
    • Manel S, Gaggiotti OE, Waples RS, (2005) Assignment methods: matching biological questions with appropriate techniques. Trends in Ecology and Evolution 20: 136-142.
    • (2005) Trends in Ecology and Evolution , vol.20 , pp. 136-142
    • Manel, S.1    Gaggiotti, O.E.2    Waples, R.S.3
  • 40
    • 33645066904 scopus 로고    scopus 로고
    • Bayesian analyses of admixture in wild and domestic cats (Felis silvestris) using linked microsatellite loci
    • Lecis R, Pierpaoli M, Biro ZS, (2006) Bayesian analyses of admixture in wild and domestic cats (Felis silvestris) using linked microsatellite loci. Molecular Ecology 15: 119-132.
    • (2006) Molecular Ecology , vol.15 , pp. 119-132
    • Lecis, R.1    Pierpaoli, M.2    Biro, Z.S.3
  • 41
    • 33645076280 scopus 로고    scopus 로고
    • Efficiency of model-based Bayesian methods for detecting hybrid individuals under different hybridization scenarios and with different numbers of loci
    • Vähä J, Primmer CR, (2006) Efficiency of model-based Bayesian methods for detecting hybrid individuals under different hybridization scenarios and with different numbers of loci. Molecular Ecology 15: 63-72.
    • (2006) Molecular Ecology , vol.15 , pp. 63-72
    • Vähä, J.1    Primmer, C.R.2
  • 43
    • 14044268392 scopus 로고    scopus 로고
    • Tiger ecology and conservation in the Indian Subcontinent
    • Karanth KU, (2003) Tiger ecology and conservation in the Indian Subcontinent. Journal of the Bombay Natural History Society 100: 169-189.
    • (2003) Journal of the Bombay Natural History Society , vol.100 , pp. 169-189
    • Karanth, K.U.1
  • 44
    • 0013455602 scopus 로고    scopus 로고
    • Where can tigers live in the future? A framework for identifying high priority areas for conservation of tigers in the wild
    • In: Seidensticker J, Christie S, Jackson P, editors, Cambridge University Press
    • Wikramanayake ED, Dinerstein E, Robinson JG, Karanth KU, Rabinowitz A, et al. (1999) Where can tigers live in the future? A framework for identifying high priority areas for conservation of tigers in the wild. In: Seidensticker J, Christie S, Jackson P, editors. Riding the Tiger. Cambridge University Press pp. 255-272.
    • (1999) Riding the Tiger , pp. 255-272
    • Wikramanayake, E.D.1    Dinerstein, E.2    Robinson, J.G.3    Karanth, K.U.4    Rabinowitz, A.5
  • 46
    • 0027939283 scopus 로고
    • Selection against inbred song sparrows during a natural population bottleneck
    • Keller L, Arcese P, Smith J, Hochachka WM, Stearns SC, (1994) Selection against inbred song sparrows during a natural population bottleneck. Nature 372: 356-357.
    • (1994) Nature , vol.372 , pp. 356-357
    • Keller, L.1    Arcese, P.2    Smith, J.3    Hochachka, W.M.4    Stearns, S.C.5
  • 47
    • 0031543851 scopus 로고    scopus 로고
    • The importance of genetic variation to the viability of mammalian populations
    • Lacy RC, (1997) The importance of genetic variation to the viability of mammalian populations. Journal of Mammalogy 78: 320-335.
    • (1997) Journal of Mammalogy , vol.78 , pp. 320-335
    • Lacy, R.C.1
  • 48
    • 0034024908 scopus 로고    scopus 로고
    • Does inbreeding affect the extinction risk of small population? Predictions from Drosophila
    • Bjilsma R, Bundgaard J, Boerema A, (2000) Does inbreeding affect the extinction risk of small population? Predictions from Drosophila. Journal of Evolutionary Biology 13: 502-514.
    • (2000) Journal of Evolutionary Biology , vol.13 , pp. 502-514
    • Bjilsma, R.1    Bundgaard, J.2    Boerema, A.3
  • 49
    • 0002659060 scopus 로고    scopus 로고
    • Managing and monitoring genetic erosion
    • In: Young AJ, Clarke G, editors, Cambridge University Press, New York
    • Sherwin WB, Moritz C, (2000) Managing and monitoring genetic erosion. In: Young AJ, Clarke G, editors. Genetics, Demography and Viability of Fragmented Populations. pp. 9-34 Cambridge University Press, New York.
    • (2000) Genetics, Demography and Viability of Fragmented Populations , pp. 9-34
    • Sherwin, W.B.1    Moritz, C.2
  • 50
    • 4344707906 scopus 로고    scopus 로고
    • Landscape connectivity influences gene flow in a roe deer population inhabiting a fragmented landscape: an individual-based approach
    • Coulon A, Cosson JF, Angibault JM, (2004) Landscape connectivity influences gene flow in a roe deer population inhabiting a fragmented landscape: an individual-based approach. Molecular Ecology 13: 2841-2850.
    • (2004) Molecular Ecology , vol.13 , pp. 2841-2850
    • Coulon, A.1    Cosson, J.F.2    Angibault, J.M.3
  • 53
    • 0028151986 scopus 로고
    • Defining 'evolutionarily significant units' for conservation
    • Moritz C, (1994) Defining 'evolutionarily significant units' for conservation. Trends in Ecology and Evolution 9: 373-375.
    • (1994) Trends in Ecology and Evolution , vol.9 , pp. 373-375
    • Moritz, C.1
  • 55
    • 0036715240 scopus 로고    scopus 로고
    • Capercaillie in the Alps: genetic evidence of metapopulation structure and population decline
    • Segelbacher G, Storch I, (2002) Capercaillie in the Alps: genetic evidence of metapopulation structure and population decline. Molecular Ecology 11: 1669-1677.
    • (2002) Molecular Ecology , vol.11 , pp. 1669-1677
    • Segelbacher, G.1    Storch, I.2
  • 56
    • 24944589602 scopus 로고    scopus 로고
    • Metapopulation dynamics and conservation of the marsh fritillary butterfly: population viability analysis and management options for a critically endangered species in Western Europe
    • Schtickzelle N, Choutt J, Goffart P, Fichefet V, Baguette M, (2005) Metapopulation dynamics and conservation of the marsh fritillary butterfly: population viability analysis and management options for a critically endangered species in Western Europe. Biological Conservation 126: 569-581.
    • (2005) Biological Conservation , vol.126 , pp. 569-581
    • Schtickzelle, N.1    Choutt, J.2    Goffart, P.3    Fichefet, V.4    Baguette, M.5
  • 58
    • 66149190927 scopus 로고    scopus 로고
    • Dynamics of range margins for metapopulations under climate change Proceedings of the Royal Society B:
    • Anderson BJ, Akcakaya HR, Araújo MB, Fordham DA, Martinez-Meyer E, et al. (2009) Dynamics of range margins for metapopulations under climate change Proceedings of the Royal Society B: Biological Sciences 276: 1415-1420.
    • (2009) Biological Sciences , vol.276 , pp. 1415-1420
    • Anderson, B.J.1    Akcakaya, H.R.2    Araújo, M.B.3    Fordham, D.A.4    Martinez-Meyer, E.5
  • 59
    • 0000767877 scopus 로고
    • Estimating relatedness using genetic markers
    • Queller DC, Goodnight KF, (1989) Estimating relatedness using genetic markers. Evolution 43: 258-275.
    • (1989) Evolution , vol.43 , pp. 258-275
    • Queller, D.C.1    Goodnight, K.F.2
  • 60
    • 0022373981 scopus 로고
    • Effect of inbreeding on genetic relatedness
    • Pamilo P, (1985) Effect of inbreeding on genetic relatedness. Hereditas 103: 195-200.
    • (1985) Hereditas , vol.103 , pp. 195-200
    • Pamilo, P.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.