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Volumn 11, Issue 1, 2012, Pages 261-268

Phosphorylation of yeast transcription factors correlates with the evolution of novel sequence and function

Author keywords

gene duplication; paralogs; Phosphorylation; transcription factors

Indexed keywords

TRANSCRIPTION FACTOR;

EID: 84855536687     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr201065k     Document Type: Article
Times cited : (7)

References (30)
  • 1
    • 0037370306 scopus 로고    scopus 로고
    • Molecular evolution meets the genomics revolution
    • DOI 10.1038/ng1088
    • Wolfe, K. H.; Li, W. H. Molecular evolution meets the genomics revolution Nat. Genet. 2003, 33 (Suppl) 255-65 (Pubitemid 36278836)
    • (2003) Nature Genetics , vol.33 , Issue.SUPPL. , pp. 255-265
    • Wolfe, K.H.1    Li, W.-H.2
  • 3
    • 75549087305 scopus 로고    scopus 로고
    • The evolution of gene duplications: Classifying and distinguishing between models
    • Innan, H.; Kondrashov, F. The evolution of gene duplications: classifying and distinguishing between models Nat. Rev. Genet. 2010, 11 (2) 97-108
    • (2010) Nat. Rev. Genet. , vol.11 , Issue.2 , pp. 97-108
    • Innan, H.1    Kondrashov, F.2
  • 4
    • 34247847827 scopus 로고    scopus 로고
    • Functional analysis of gene duplications in Saccharomyces cerevisiae
    • DOI 10.1534/genetics.106.064329
    • Guan, Y.; Dunham, M. J.; Troyanskaya, O. G. Functional analysis of gene duplications in Saccharomyces cerevisiae Genetics 2007, 175 (2) 933-43 (Pubitemid 46798288)
    • (2007) Genetics , vol.175 , Issue.2 , pp. 933-943
    • Guan, Y.1    Dunham, M.J.2    Troyanskaya, O.G.3
  • 5
    • 34548527460 scopus 로고    scopus 로고
    • Comparative analysis indicates regulatory neofunctionalization of yeast duplicates
    • Tirosh, I.; Barkai, N. Comparative analysis indicates regulatory neofunctionalization of yeast duplicates Genome Biol. 2007, 8 (4) R50
    • (2007) Genome Biol. , vol.8 , Issue.4 , pp. 50
    • Tirosh, I.1    Barkai, N.2
  • 6
    • 34548501747 scopus 로고    scopus 로고
    • Natural history and evolutionary principles of gene duplication in fungi
    • DOI 10.1038/nature06107, PII NATURE06107
    • Wapinski, I.; Pfeffer, A.; Friedman, N.; Regev, A. Natural history and evolutionary principles of gene duplication in fungi Nature 2007, 449 (7158) 54-61 (Pubitemid 47373776)
    • (2007) Nature , vol.449 , Issue.7158 , pp. 54-61
    • Wapinski, I.1    Pfeffer, A.2    Friedman, N.3    Regev, A.4
  • 7
    • 0037435030 scopus 로고    scopus 로고
    • Mass spectrometry-based proteomics
    • DOI 10.1038/nature01511
    • Aebersold, R.; Mann, M. Mass spectrometry-based proteomics Nature 2003, 422 (6928) 198-207 (Pubitemid 36362757)
    • (2003) Nature , vol.422 , Issue.6928 , pp. 198-207
    • Aebersold, R.1    Mann, M.2
  • 9
    • 1942452749 scopus 로고    scopus 로고
    • Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae
    • DOI 10.1038/nature02424
    • Kellis, M.; Birren, B. W.; Lander, E. S. Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae Nature 2004, 428 (6983) 617-24 (Pubitemid 38524797)
    • (2004) Nature , vol.428 , Issue.6983 , pp. 617-624
    • Kellis, M.1    Birren, B.W.2    Lander, E.S.3
  • 10
    • 65349155149 scopus 로고    scopus 로고
    • Weak functional constraints on phosphoproteomes
    • Landry, C. R.; Levy, E. D.; Michnick, S. W. Weak functional constraints on phosphoproteomes Trends Genet. 2009, 25 (5) 193-7
    • (2009) Trends Genet. , vol.25 , Issue.5 , pp. 193-7
    • Landry, C.R.1    Levy, E.D.2    Michnick, S.W.3
  • 12
    • 34547844121 scopus 로고    scopus 로고
    • Automatic genome-wide reconstruction of phylogenetic gene trees
    • Wapinski, I.; Pfeffer, A.; Friedman, N.; Regev, A. Automatic genome-wide reconstruction of phylogenetic gene trees Bioinformatics 2007, 23 (13) i549-58
    • (2007) Bioinformatics , vol.23 , Issue.13 , pp. 549-58
    • Wapinski, I.1    Pfeffer, A.2    Friedman, N.3    Regev, A.4
  • 14
    • 34247226079 scopus 로고    scopus 로고
    • Inferring condition-specific transcription factor function from DNA binding and gene expression data
    • McCord, R. P.; Berger, M. F.; Philippakis, A. A.; Bulyk, M. L. Inferring condition-specific transcription factor function from DNA binding and gene expression data Mol. Syst. Biol. 2007, 3, 100
    • (2007) Mol. Syst. Biol. , vol.3 , pp. 100
    • McCord, R.P.1    Berger, M.F.2    Philippakis, A.A.3    Bulyk, M.L.4
  • 17
    • 33544459055 scopus 로고    scopus 로고
    • Proteomic analysis of cellular signaling
    • Chen, W. G.; White, F. M. Proteomic analysis of cellular signaling Expert Rev. Proteomics 2004, 1 (3) 343-54
    • (2004) Expert Rev. Proteomics , vol.1 , Issue.3 , pp. 343-54
    • Chen, W.G.1    White, F.M.2
  • 18
    • 33750456519 scopus 로고    scopus 로고
    • Vivo, and Site-Specific Phosphorylation Dynamics in Signaling Networks
    • DOI 10.1016/j.cell.2006.09.026, PII S0092867406012748
    • Olsen, J. V.; Blagoev, B.; Gnad, F.; Macek, B.; Kumar, C.; Mortensen, P.; Mann, M. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks Cell 2006, 127 (3) 635-48 (Pubitemid 44647421)
    • (2006) Cell , vol.127 , Issue.3 , pp. 635-648
    • Olsen, J.V.1    Blagoev, B.2    Gnad, F.3    Macek, B.4    Kumar, C.5    Mortensen, P.6    Mann, M.7
  • 19
    • 33746648069 scopus 로고    scopus 로고
    • Protein kinases seek close encounters with active genes
    • DOI 10.1126/science.1131158
    • Edmunds, J. W.; Mahadevan, L. C. Cell signaling. Protein kinases seek close encounters with active genes Science 2006, 313 (5786) 449-51 (Pubitemid 44148439)
    • (2006) Science , vol.313 , Issue.5786 , pp. 449-451
    • Edmunds, J.W.1    Mahadevan, L.C.2
  • 27
    • 47849125967 scopus 로고    scopus 로고
    • A multidimensional chromatography technology for in-depth phosphoproteome analysis
    • DOI 10.1074/mcp.M700468-MCP200
    • Albuquerque, C. P.; Smolka, M. B.; Payne, S. H.; Bafna, V.; Eng, J.; Zhou, H. A multidimensional chromatography technology for in-depth phosphoproteome analysis Mol. Cell. Proteomics 2008, 7 (7) 1389-96 (Pubitemid 352038280)
    • (2008) Molecular and Cellular Proteomics , vol.7 , Issue.7 , pp. 1389-1396
    • Albuquerque, C.P.1    Smolka, M.B.2    Payne, S.H.3    Bafna, V.4    Eng, J.5    Zhou, H.6
  • 28
    • 25844471721 scopus 로고    scopus 로고
    • The Yeast Gene Order Browser: Combining curated homology and syntenic context reveals gene fate in polyploid species
    • DOI 10.1101/gr.3672305
    • Byrne, K. P.; Wolfe, K. H. The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species Genome Res. 2005, 15 (10) 1456-61 (Pubitemid 41400914)
    • (2005) Genome Research , vol.15 , Issue.10 , pp. 1456-1461
    • Byrne, K.P.1    Wolfe, K.H.2
  • 29
    • 0037100671 scopus 로고    scopus 로고
    • MAFFT: A novel method for rapid multiple sequence alignment based on fast Fourier transform
    • Katoh, K.; Misawa, K.; Kuma, K.; Miyata, T. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform Nucleic Acids Res. 2002, 30 (14) 3059-66 (Pubitemid 34851225)
    • (2002) Nucleic Acids Research , vol.30 , Issue.14 , pp. 3059-3066
    • Katoh, K.1    Misawa, K.2    Kuma, K.-I.3    Miyata, T.4
  • 30
    • 0033028741 scopus 로고    scopus 로고
    • Quantifying DNA-protein interactions by double-stranded DNA arrays
    • DOI 10.1038/9878
    • Bulyk, M. L.; Gentalen, E.; Lockhart, D. J.; Church, G. M. Quantifying DNA-protein interactions by double-stranded DNA arrays Nat. Biotechnol. 1999, 17 (6) 573-7 (Pubitemid 29262921)
    • (1999) Nature Biotechnology , vol.17 , Issue.6 , pp. 573-577
    • Bulyk, M.L.1    Gentalen, E.2    Lockhart, D.J.3    Church, G.M.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.