Erratum: Carbon and sulfur back flux during anaerobic microbial oxidation of methane and coupled sulfate reduction (Proceedings of the National Academy of Sciences of the United States of America (2011) 108, (E1484-E1490) DOI: 10.1073/pnas.1106032108);Carbon and sulfur back flux during anaerobic microbial oxidation of methane and coupled sulfate reduction

Proceedings of the National Academy of Sciences of the United States of America

Volumn 108, Issue 52, 2011, Pages 21170-21173

  Holler, Thomas ^a   Wegener, Gunter ^a   Niemann, Helge ^a,b   Deusner, Christian ^a,d   Ferdelman, Timothy G ^a   Boetius, Antje ^a,c   Brunner, Benjamin ^a   Widdel, Friedrich ^a  

^a MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY   (Germany)

^b UNIVERSITY OF BASEL   (Switzerland)

^c ALFRED WEGENER INSTITUTE FOR POLAR AND MARINE RESEARCH   (Germany)

^d GEOMAR HELMHOLTZ CENTRE FOR OCEAN RESEARCH KIEL   (Germany)

Author keywords

Anaerobic methanotrophy; Biological thermodynamics; Element cycle; Haldane relationship

Indexed keywords

BICARBONATE C 14; CARBON; ISOTOPE; METHANE; METHANE C 14; SULFATE; SULFATE S 35; SULFIDE S 35; SULFUR; UNCLASSIFIED DRUG;

ANAEROBIC METABOLISM; ARCHEAN; ARTICLE; BACTERIAL METABOLISM; BIOGEOCHEMICAL CYCLING; CATABOLISM; ENERGY METABOLISM; ENERGY RESOURCE; ENZYME SUBSTRATE; ISOTOPE LABELING; NONHUMAN; PRIORITY JOURNAL; THERMODYNAMICS;

ARCHAEA; BACTERIA (MICROORGANISMS);

EID: 84855489685     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1218683109     Document Type: Erratum

References (59)

1. Haldane JBS (1930) Enzymes (Longmans, Green & Co., London).
2. Boyer PD (1959) Uses and limitations of measurements of rates of isotopic exchange and incorporation in catalyzed reactions. Arch Biochem Biophys 82:387-410.
3. Cornish-Bowden A (2004) Fundamentals of Enzyme Kinetics (Portland Press, London).
4. Bisswanger H (2008) Enzyme Kinetics: Principles and Methods (Wiley, New York).
5. Purich DL (2010) Enzyme Kinetics: Catalysis & Control: A Reference of Theory and Best-Practice Methods (Elsevier Science, Amsterdam).
6. Thauer RK, Jungermann K, Decker K (1977) Energy conservation in chemotrophic anaerobic bacteria. Bacteriol Rev 41:100-180. (Pubitemid 8082287)
7. Thauer RK, Morris JG (1984) Metabolism of chemotrophic anaerobes: Old views and new aspects. The Microbe: Part II: Prokaryotes and Eukaryotes, eds Kelly DP, Carr NG (Cambridge University Press, Cambridge, UK), pp 123-168.
8. Schink B (1997) Energetics of syntrophic cooperation in methanogenic degradation. Microbiol Mol Biol Rev 61:262-280.
9. Jackson BE, McInerney MJ (2002) Anaerobic microbial metabolism can proceed close to thermodynamic limits. Nature 415:454-456. (Pubitemid 34100959)
10. Deppenmeier U, Müller V (2008) Life close to the thermodynamic limit: How methanogenic archaea conserve energy. Results Probl Cell Differ 45:123-152.
11. Stams AJM, Plugge CM (2009) Electron transfer in syntrophic communities of anaerobic bacteria and archaea. Nat Rev Microbiol 7:568-577.
12. Zehnder AJB, Brock TD (1979) Methane formation and methane oxidation by methanogenic bacteria. J Bacteriol 137:420-432. (Pubitemid 9097588)
13. 14C-carbon monoxide. Mar Geol 137:13-23.
14. Moran JJ, House CH, Freeman KH, Ferry JG (2005) Trace methane oxidation studied in several Euryarchaeota under diverse conditions. Archaea 1:303-309. (Pubitemid 40801837)
15. Moran JJ, House CH, Thomas B, Freeman KH (2007) Products of trace methane oxidation during nonmethyltrophic growth by Methanosarcina. J Geophys Res 112, G02011.
16. Meulepas RJW, et al. (2010) Trace methane oxidation and the methane dependency of sulfate reduction in anaerobic granular sludge. FEMS Microbiol Ecol 72:261-271.
17. Scheller S, Goenrich M, Boecher R, Thauer RK, Jaun B (2010) The key nickel enzyme of methanogenesis catalyses the anaerobic oxidation of methane. Nature 465:606-608.
18. Trudinger PA, Chambers LA (1973) Reversibility of bacterial sulfate reduction and its relevance to isotope fractionation. Geochim Cosmochim Acta 37:1775-1778.
19. 2 in anaerobic bacteria via a novel pathway not involving reactions of the citric acid cycle. Arch Microbiol 145:162-172.
20. 2 and the carbonyl group of acetyl-CoA and topology of enzymes involved. Arch Microbiol 152:189-195.
21. Nauhaus K, Boetius A, Krüger M, Widdel F (2002) In vitro demonstration of anaerobic oxidation of methane coupled to sulphate reduction in sediment from a marine gas hydrate area. Environ Microbiol 4:296-305.
22. Knab NJ, Dale AW, Lettmann K, Fossing H, Jørgensen BB (2008) Thermodynamic and kinetic control on anaerobic oxidation of methane in marine sediments. Geochim Cosmochim Acta 72:3746-3757.
23. Alperin MJ, Hoehler TM (2009) Anaerobic methane oxidation by archaea/sulfate-reducing bacteria aggregates: 1. Thermodynamic and physical constraints. Am J Sci 309:869-957.
24. Reeburgh WS (2007) Oceanic methane biogeochemistry. Chem Rev 107:486-513.
25. Knittel K, Boetius A (2009) Anaerobic oxidation of methane: Progress with an unknown process. Annu Rev Microbiol 63:311-334.
26. Hinrichs K-U, Hayes JM, Sylva SP, Brewer PG, DeLong EF (1999) Methane-consuming archaebacteria in marine sediments. Nature 398:802-805.
27. Boetius A, et al. (2000) A marine microbial consortium apparently mediating anaerobic oxidation of methane. Nature 407:623-626.
28. Orphan VJ, House CH, Hinrichs K-U, McKeegan KD, DeLong EF (2002) Multiple archaeal groups mediate methane oxidation in anoxic cold seep sediments. Proc Natl Acad Sci USA 99:7663-7668. (Pubitemid 34568748)
29. Niemann H, et al. (2006) Novel microbial communities of the Haakon Mosby mud volcano and their role as a methane sink. Nature 443:854-858. (Pubitemid 44622695)
30. Schreiber L, Holler T, Knittel K, Meyerdierks A, Amann R (2010) Identification of the dominant sulfate-reducing bacterial partner of anaerobic methanotrophs of the ANME-2 clade. Environ Microbiol 12:2327-2340.
31. Hoehler TM, Alperin MJ, Albert DB, Martens CS (1994) Field and laboratory studies of methane oxidation in anoxic marine sediment: Evidence for a methanogenic-sulfate reducer consortium. Global Biogeochem Cycles 8:451-463.
32. 2 by methanotrophic microbial mats from gas seeps of the anoxic Black Sea. Appl Environ Microbiol 73:2271-2283.
33. Orcutt B, Samarkin V, Boetius A, Joye SB (2008) On the relationship between methane production and oxidation by anaerobic methanotrophic communities from cold seeps of the Gulf of Mexico. Environ Microbiol 10:1108-1117. (Pubitemid 351499229)
34. Sørensen KB, Finster K, Ramsing NB (2001) Thermodynamic and kinetic requirements in anaerobic methane oxidizing consortia exclude hydrogen, acetate, and methanol as possible electron shuttles. Microb Ecol 42:1-10. (Pubitemid 32731566)
35. Moran JJ, et al. (2008) Methyl sulfides as intermediates in the anaerobic oxidation of methane. Environ Microbiol 10:162-173.
36. Orcutt B, Meile C (2008) Constraints on mechanisms and rates of anaerobic oxidation of methane by microbial consortia: Process-based modeling of ANME-2 archaea and sulfate reducing bacteria interactions. Biogeosciences 5:1587-1599.
37. Meulepas RJW, Jagersma CG, Khadem AF, Stams AJM, Lens PNL (2010) Effect of methanogenic substrates on anaerobic oxidation of methane and sulfate reduction by an anaerobic methanotrophic enrichment. Appl Microbiol Biotechnol 87:1499-1506.
38. Nauhaus K, Albrecht M, Elvert M, Boetius A, Widdel F (2007) In vitro cell growth of marine archaeal-bacterial consortia during anaerobic oxidation of methane with sulfate. Environ Microbiol 9:187-196. (Pubitemid 46059009)
39. Holler T, et al. (2009) Substantial 13C/12C and D/H fractionation during anaerobic oxidation of methane by marine consortia enriched in vitro. Environ Microbiol Rep 1:370-376.
40. Cleland WW (1963) The kinetics of enzyme-catalyzed reactions with two or more substrates or products. I. Nomenclature and rate equations. Biochim Biophys Acta 67:104-137.
41. Zehnder AJB, Brock TD (1980) Anaerobic methane oxidation: Occurrence and ecology. Appl Environ Microbiol 39:194-204. (Pubitemid 10099201)
42. Moore JW, Pearson RG (1981) Kinetics and Mechanism (Wiley, New York), 3rd Ed.
43. Rees CE (1973) A steady-state model for sulphur isotope fractionation in bacterial reduction processes. Geochim Cosmochim Acta 37:1141-1162.
44. Canfield DE (2001) Biogeochemistry of sulfur isotopes. Rev Mineral Geochem 43:607-636.
45. Valentine DL, Chidthaisong A, Rice A, Reeburgh WS, Tyler SC (2004) Carbon and hydrogen isotope fractionation by moderately thermophilic methanogens. Geochim Cosmochim Acta 68:1571-1590. (Pubitemid 38464301)
46. Brunner B, Bernasconi SM (2005) A revised isotope fractionation model for dissimilatory sulfate reduction in sulfate reducing bacteria. Geochim Cosmochim Acta 69:4759-4771. (Pubitemid 41555872)
47. Penning H, Plugge CM, Galand PE, Conrad R (2005) Variation of carbon isotope fractionation in hydrogenotrophic methanogenic microbial cultures and environmental samples at different energy status. Glob Change Biol 11:2103-2113. (Pubitemid 43904648)
48. Johnston DT, Farquhar J, Canfield DE (2007) Sulfur isotope insights into microbial sulfate reduction: When microbes meet models. Geochim Cosmochim Acta 71:3929-3947. (Pubitemid 47163649)
49. Farquhar J, Canfield DE, Masterson A, Bao H, Johnston DT (2008) Sulfur and oxygen isotope study of sulfate reduction in experiments with natural populations from Fællestrand, Denmark. Geochim Cosmochim Acta 72:2805-2821.
50. Eckert T, Brunner B, Edwards EA, Wortmann UG (2011) Microbially mediated reoxidation of sulfide during dissimilatory sulfate reduction by Desulfobacter latus. Geochim Cosmochim Acta 75:3469-3485.
51. Tarpgaard IH, Røy H, Jørgensen BB (2011) Concurrent low- and high-affinity sulfate reduction kinetics in marine sediment. Geochim Cosmochim Acta 75:2997-3010.
52. Sim MS, Bosak T, Ono S (2011) Large sulfur isotope fractionation does not require disproportionation. Science 333:74-77.
53. Widdel F, Bak F (1992) Gram-negative mesophilic sulfate-reducing bacteria. The Prokaryotes, eds Balows A, Trüper HG, Dworkin M, Harder W, Schleifer K-H (Springer, New York), pp 3352-3378.
54. Kallmeyer J, Ferdelman TG, Weber A, Fossing H, Jørgensen BB (2004) A cold chromium distillation procedure for radiolabeled sulfide applied to sulfate reduction measurements. Limnol Oceanogr Methods 2:171-180. (Pubitemid 43723711)
55. Treude T, Krüger M, Boetius A, Jørgensen BB (2005) Environmental control on anaerobic oxidation of methane in the gassy sediments of Eckernförde Bay (German Baltic). Limnol Oceanogr 50:1771-1786. (Pubitemid 41692185)
56. 2 by a new type of sulfate-reducing bacterium. Arch Microbiol 156:5-14.
57. 35. Microbiology 31:329-335.
58. Jørgensen BB (1978) A comparison of methods for the quantification of bacterial sulfate reduction in coastal marine sediments. 1. Measurement with radiotracer techniques. Geomicrobiol J 1:11-27.
59. Fossing H, Jørgensen BB (1990) Isotope exchange reaction with radiolabeled sulfur compounds in anoxic seawater. Biogeochemistry 9:223-245. (Pubitemid 20415069)