Probing interactions between uranyl ions and lipid membrane by molecular dynamics simulation

Computational and Theoretical Chemistry

Volumn 976, Issue 1-3, 2011, Pages 130-134

  Lin, Ying Wu ^a,b   Liao, Li Fu ^a  

^a UNIVERSITY OF SOUTH CHINA   (China)

^b NANJING UNIVERSITY   (China)

Author keywords

Fluidity; Membrane; Modeling; POPE; Uranium

Indexed keywords

EID: 84555218434     PISSN: 2210271X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.comptc.2011.08.016     Document Type: Article

References (34)

1. Craft E.S., Abu-Qare A.W., Flaherty M.M., Garofolo M.C., Rincavage H.L., Abou-Donia M.B. J. Toxicol. Environ. Health B 2004, 7:297.
2. Lee J.H., Wang Z., Lu Y. J. Am. Chem. Soc. 2008, 130:14217.
3. Brown A.K., Liu J., He Y., Lu Y. Chem. Biochem. 2009, 10:486.
4. Vidaud C., Gourion-Arsiquaud S., Rollin-Genetet F., Torne-Celer C., Plantevin S., Pible O., Berthomieu C., Quéméneur E. Biochemistry 2007, 46:2215.
5. Montavon G., Apostolidis C., Bruchertseifer F., Repinc U., Morgenstern A. J. Inorg. Biochem. 2009, 103:1609.
6. Michon J., Frelon S., Garnier C., Coppin F. J. Fluoresc. 2010, 20:581.
7. Pible O., Guilbaud P., Pellequer J.-L., Vidaud C., Quéméneur E. Biochimie 2006, 88:1631.
8. Ting-Beall H.P. J. Microsc. 1980, 118:221.
9. Nagle J.F., Tristram-Nagle S. Biochim. Biophys. Acta 2000, 1469:159.
10. Heller H., Schaefer M., Schulten K. J. Phys. Chem. 1993, 97:8343.
11. Lupyan D., Mezei M., Logothetis D.E., Osman R. Biophys. J. 2010, 98:240.
12. Sepulcre F., Cordomí A., Proietti M.G., Perez J.J., García J., Querol E., Padrós E. Proteins 2007, 67:360.
13. Lin Y.W. Proteins 2011, 79:679.
14. Lins R.D., Straatsma T.P. Biophys. J. 2001, 81:1037.
15. Lins R.D., Vorpagel E.R., Guglielmi M., Straatsma T.P. Biomacromolecules 2008, 9:29.
16. Johnson K.J., Cygan R.T., Fein J.B. Geochim. Cosmochim. Acta 2006, 70:5075.
17. Petrache H.I., Tu K., Nagle J.F. Biophys. J. 1999, 76:2479.
18. Nagle J.F., Zhang R., Tristram-Nagle S., Sun W., Petrache H.I., Suter R.M. Biophys. J. 1996, 70:1419.
19. Humphrey W., Dalke A., Schulten K. J. Mol. Graph. 1996, 14:33.
20. Kalé L., Skeel R., Bhandarkar M., Brunner R., Gursoy A., Krawetz N., Phillips J., Shinozaki A., Varadarajan K., Schulten K. J. Comput. Phys. 1999, 151:283.
21. MacKerell A.D., Bashford D., Bellott M., Dunbrack R.L., Evanseck J., Field M.J., Fischer S., Gao J., Guo H., Ha S., Joseph D., Kuchnir L., Kuczera K., Lau F.T.K., Mattos C., Michnick S., Ngo T., Nguyen D.T., Prodhom B., Reiher I.W.E., Roux B., Schlenkrich M., Smith J., Stote R., Straub J., Watanabe M., Wiorkiewicz-Kuczera J., Yin D., Karplus M. J. Phys. Chem. B 1998, 102:3586.
22. Guilbaud P., Wipff G. J. Mol. Strut. Theochem 1996, 366:55.
23. Soderholm L., Skanthakumar S., Wilson R.E. J. Phys. Chem. A. 2011, 115:4959.
24. Guillaumont R., Fanghanel T., Fuger J., Grenthe I., Neck V., Palmer D.A., Rand M.H. Update on the Chemical Thermodynamics of Uranium, Neptunium, Plutonium, Americium, and Technetium 2003, vol. 5. Elsevier, Amsterdam, (pp. 970).
25. Disalvo E.A., Lairion F., Martini F., Tymczyszyn E., Frías M., Almaleck H., Gordillo G.J. Biochim. Biophys. Acta 2008, 1778:2655.
26. Larsen T.M., Boehlein S.K., Schuster S.M., Richards N.G., Thoden J.B., Holden H.M., Rayment I. Biochemistry 1999, 38:16146.
27. Hagberg D., Karlström G., Roos B.O., Gagliardi L. J. Am. Chem. Soc. 2005, 127:14250.
28. Shityakov S., Dandekar T. Nano 2011, 6:19.
29. Seelig A., Seelig J. Biochemistry 1977, 16:45.
30. Lafleur M., Cullis P.R., Bloom M. Eur. Biophys. J. 1990, 19:55.
31. Romo T.D., Bradney L.A., Greathouse D.V., Grossfield A. Biochim. Biophys. Acta 2011, 1808:2019.
32. Rahman M., Patching S.G., Ismat F., Henderson P.J., Herbert R.B., Baldwin S.A., Mc Pherson M.J. Mol. Membr. Biol. 2008, 25:683.
33. Wickner W., Schekman R. Science 2005, 310:1452.
34. Wan D., Liao L.F., Zhao M.M., Wu M.L., Wu Y.M., Lin Y.W. J. Mol. Model. 2011, 10.1007/s00894-011-1097-1.