메뉴 건너뛰기




Volumn 21, Issue 12, 2004, Pages 2290-2298

Comparison of three methods for estimating rates of synonymous and nonsynonymous nucleotide substitutions

Author keywords

Accuracy of estimation; Estimation methods; Ka Ks ratio; Nonsynonymous substitution; Synonymous substitution

Indexed keywords

ARTICLE; CODON USAGE; COMPUTER SIMULATION; GENE MUTATION; GENE SEQUENCE; INTERMETHOD COMPARISON; MOLECULAR EVOLUTION;

EID: 8444247896     PISSN: 07374038     EISSN: None     Source Type: Journal    
DOI: 10.1093/molbev/msh242     Document Type: Article
Times cited : (39)

References (11)
  • 1
    • 0029563023 scopus 로고
    • A method for estimating the numbers of synonymous and nonsynonymous substitutions per site
    • Comeron, J. M. 1995. A method for estimating the numbers of synonymous and nonsynonymous substitutions per site. J. Mol. Evol. 41:1152-1159.
    • (1995) J. Mol. Evol. , vol.41 , pp. 1152-1159
    • Comeron, J.M.1
  • 2
    • 0028168856 scopus 로고
    • A codon-based model of nucleotide substitution for protein-coding DNA sequence
    • Goldman, N., and Z. Yang. 1994. A codon-based model of nucleotide substitution for protein-coding DNA sequence. Mol. Biol. Evol. 11:725-736.
    • (1994) Mol. Biol. Evol. , vol.11 , pp. 725-736
    • Goldman, N.1    Yang, Z.2
  • 3
    • 0028906291 scopus 로고
    • New methods for estimating the numbers of synonymous and nonsynonymous substitutions
    • Ina, Y. 1995. New methods for estimating the numbers of synonymous and nonsynonymous substitutions. J. Mol. Evol. 40:190-226.
    • (1995) J. Mol. Evol. , vol.40 , pp. 190-226
    • Ina, Y.1
  • 4
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • H. N. Munro, ed. Academic Press, New York
    • Jukes, K. H., and C. R. Cantor. 1969. Evolution of protein molecules. Pp. 21-132 in H. N. Munro, ed. Mammalian protein metabolism. Academic Press, New York.
    • (1969) Mammalian Protein Metabolism , pp. 21-132
    • Jukes, K.H.1    Cantor, C.R.2
  • 6
    • 0027403961 scopus 로고
    • Unbiased estimation of the rates of synonymous and nonsynonymous substitution
    • Li, W.-H. 1993. Unbiased estimation of the rates of synonymous and nonsynonymous substitution. J. Mol. Evol. 36:96-99.
    • (1993) J. Mol. Evol. , vol.36 , pp. 96-99
    • Li, W.-H.1
  • 7
    • 0003421005 scopus 로고    scopus 로고
    • Sinauer Associates, Sunderland, Mass.
    • _. 1997. Molecular evolution. Sinauer Associates, Sunderland, Mass.
    • (1997) Molecular Evolution
  • 8
    • 0022005270 scopus 로고
    • A new method for estimating synonymous and non-synonymous rates of nucleotide substitutions considering the relative likelihood of nucleotide and codon changes
    • Li, W.-H., C.-I. Wu, and C.-C. Luo. 1985. A new method for estimating synonymous and non-synonymous rates of nucleotide substitutions considering the relative likelihood of nucleotide and codon changes. Mol. Biol. Evol. 2:150-174.
    • (1985) Mol. Biol. Evol. , vol.2 , pp. 150-174
    • Li, W.-H.1    Wu, C.-I.2    Luo, C.-C.3
  • 10
    • 0027533924 scopus 로고
    • Evolution of the Zfx and Zfy genes: Rates and interdependence between the genes
    • Pamilo, P., and N. O. Bianchi. 1993. Evolution of the Zfx and Zfy genes: rates and interdependence between the genes. Mol. Biol. Evol. 10:271-281.
    • (1993) Mol. Biol. Evol. , vol.10 , pp. 271-281
    • Pamilo, P.1    Bianchi, N.O.2
  • 11
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • Yang, Z. 1997. PAML: a program package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci. 13: 555-556.
    • (1997) Comput. Appl. Biosci. , vol.13 , pp. 555-556
    • Yang, Z.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.