Global and local hard X-ray tomography of a centimeter-size tumor vessel tree

Journal of Synchrotron Radiation

Volumn 19, Issue 1, 2012, Pages 114-125

  Lang, Sabrina ^a   Dominietto, Marco ^b   Cattin, Philippe ^a   Ulmann Schuler, Alexandra ^c   Weitkamp, Timm ^d   Müller, Bert ^a  

^a UNIVERSITY OF BASEL   (Switzerland)

^b ETH ZURICH   (Switzerland)

^c UNIVERSITY OF ZURICH   (Switzerland)

^d SYNCHROTRON SOLEIL   (France)

Author keywords

angiogenesis; histogram matching; lens coupled CCD; local tomography; synchrotron radiation based micro computed tomography; tumor vascularization

Indexed keywords

ANGIOGENESIS; HISTOGRAM MATCHING; LOCAL TOMOGRAPHY; MICROCOMPUTED TOMOGRAPHY; TUMOR VASCULARIZATION;

COMPUTERIZED TOMOGRAPHY; IMAGE RESOLUTION; RADIOGRAPHY; TUMORS; VISUALIZATION; X RAY ABSORPTION;

TOMOGRAPHY;

ANIMAL; ARTICLE; BAGG ALBINO MOUSE; CAPILLARY; COLON TUMOR; COMPUTER ASSISTED TOMOGRAPHY; HISTOLOGY; HUMAN; METHODOLOGY; MICRO-COMPUTED TOMOGRAPHY; MOUSE; NEOVASCULARIZATION (PATHOLOGY); NUDE MOUSE; RADIOGRAPHY; SYNCHROTRON; THREE DIMENSIONAL IMAGING; VASCULARIZATION;

ANIMALS; CAPILLARIES; COLONIC NEOPLASMS; HUMANS; IMAGING, THREE-DIMENSIONAL; MICE; MICE, INBRED BALB C; MICE, NUDE; NEOVASCULARIZATION, PATHOLOGIC; SYNCHROTRONS; TOMOGRAPHY, X-RAY COMPUTED; X-RAY MICROTOMOGRAPHY;

EID: 84255167028     PISSN: 09090495     EISSN: 16005775     Source Type: Journal    
DOI: 10.1107/S0909049511046139     Document Type: Article

References (36)

1. Andronache, A., von Siebenthal, M., Székely, G. & Cattin, P. (2008). Med. Image Anal. 12, 3-15.
2. Bonnet, S., Peyrin, F., Turjman, F. & Prost, R. (2000). IEEE Trans. Image Process. 9, 1445-1450.
3. Faridani, A., Ritman, E. L. & Smith, K. T. (1992). SIAM J. Appl. Math. 52, 1193-1198.
4. Frese, T., Rouze, N. C., Bouman, C. A., Sauer, K. & Hutchins, G. D. (2003). IEEE Trans. Med. Imag. 22, 1806-1810.
5. Gonzalez, R. C. & Woods, R. E. (2002). Digital Image Processing. New Jersey: Prentice Hall.
6. Gureyev, T., Nesterets, Y. & Mayo, S. (2007). Opt. Commun. 280, 39-48.
7. Haberthür, D., Hintermüller, C., Marone, F., Schittny, J. C. & Stampanoni, M. (2010). J. Synchrotron Rad. 17, 590-599.
8. Hamelin, B., Goussard, Y., Dussault, J.-P., Cloutier, G., Beaudoin, G. & Soulez, G. (2010). Med. Phys. 37, 4577-4589.
9. Hammersley, A. P. (1999). PyHST, http://www.esrf.eu/computing/scientific/ HST/HSTREF/hst.html.
10. Kak, A. C. & Slaney, M. (1988). Principles of Computerized Tomographic Imaging. New York: IEEE Press.
11. Knops, Z. F., Maintz, J. B., Viergever, M. A. & Pluim, J. P. (2006). Med. Image Anal. 10, 432-439.
12. Koch, A., Raven, C., Spanne, P. & Snigirev, A. (1998). J. Opt. Soc. Am. 15, 1940-1951.
13. Köhler, T. & Noo, F. (2009). Phys. Rev. Lett. 102, 1.
14. Krucker, T., Lang, A. & Meyer, E. P. (2006). Microsc. Res. Tech. 69, 138-147.
15. Kudo, H., Courdurier, M., Noo, F. & Defrise, M. (2008). Phys. Med. Biol. 53, 2207-2231.
16. Marone, F., Münch, B. & Stampanoni, M. (2010). Proc. SPIE, 7804, 780410.
17. Martin, T. & Koch, A. (2006). J. Synchrotron Rad. 13, 180-194.
18. Modersitzki, J. (2004). Numerical Methods for Image Registration. Oxford University Press.
19. Müller, B., Beckmann, F., Huser, M., Maspero, F., Székely, G., Ruffieux, K., Thurner, P. & Wintermantel, E. (2002). Biomol. Eng. 19, 73-78.
20. Müller, B., Bernhardt, R., Weitkamp, T., Beckmann, F., Bräuer, R., Schurigt, U., Schrott-Fischer, A., Glueckert, R., Ney, M., Beleites, T., Jolly, C. & Scharnweber, D. (2007). Intl J. Mater. Res. 7, 613-621.
21. Müller, B., Lang, S., Dominietto, M., Rudin, M., Schulz, G., Deyhle, H., Germann, M., Pfeiffer, F., David, C. & Weitkamp, T. (2008). Proc. SPIE, 7078, 70780B.
22. PCO-AG (2008). pco.2000, http://www.pco.de/fileadmin/user-upload/db/ products/datasheet/pco2000-20080805.pdf.
23. Pfeiffer, F., David, C., Bunk, O., Donath, T., Bech, M., Le Duc, G., Bravin, A. & Cloetens, P. (2008). Phys. Rev. Lett. 101, 168101.
24. Potter, R. F. & Groom, A. C. (1983). Microvasc. Res. 25, 68-84.
25. Rack, A., Weitkamp, T., Riotte, M., Grigoriev, D., Rack, T., Helfen, L., Baumbach, T., Dietsch, R., Holz, T., Krämer, M., Siewert, F., Medunâ, M., Cloetens, P. & Ziegler, E. (2010). J. Synchrotron Rad. 17, 496-510.
26. Schneider, P., Voide, R., Stampanoni, M. & Müller, R. (2009). Biomed. Tech/Biomed. Eng. 54, 48-54.
27. Snigirev, A., Snigireva, I., Kohn, V., Kuznetsov, S. & Schelokov, I. (1995). Rev. Sci. Instrum. 66, 5486-5492.
28. Stampanoni, M., Groso, A., Isenegger, A., Mikuljan, G., Chen, Q., Bertrand, A., Henein, S., Betemps, R., Frommherz, U., Bohler, P., Meister, D., Lange, M. & Abela, R. (2006). Proc. SPIE, 6318, 63180M.
29. Takeda, T., Itai, Y., Hyodo, K., Ando, M., Akatsuka, T. & Uyama, C. (1998). J. Synchrotron Rad. 5, 326-332.
30. Thurner, P., Beckmann, F. & Müller, B. (2004). Nucl. Instrum. Methods Phys. Res. B, 225, 599-603.
31. Thurner, P., Müller, B., Beckmann, F., Weitkamp, T., Rau, C., Müller, R., Hubbell, J. A. & Sennhauser, U. (2003). Nucl. Instrum. Methods Phys. Res. B, 200, 397-405.
32. Tsuchiyama, A., Uesugi, K., Nakano, K. & Ikeda, S. (2005). Am. Mineral. 90, 132-142.
33. Weitkamp, T., Rau, C., Snigirev, A. A., Benner, B., Günzler, T., Kuhlmann, M. & Schroer, C. G. (2002). Proc. SPIE, 4503, 92-102.
34. WHO (2009). Cancer, http://www.who.Int/mediacentre/factsheets/fs297/en/ index.html.
35. Wiedeman, M. P. (1963). Am. Heart Assoc. 12, 375-378.
36. Xiao, X., De Carlo, F. & Stock, S. (2007). Rev. Sci. Instrum. 78, 1-7.