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Volumn , Issue , 2011, Pages 162-166

The length evolution of 5′ untranslated regions - The stochastic model revisited

Author keywords

5 untranslated region; effective population size; evolution; upstream start codon

Indexed keywords

DROSOPHILA MELANOGASTER; EFFECTIVE POPULATION SIZE; EVOLUTION; LARGE EFFECTIVE; MOLECULAR EVOLUTION; NUCLEOTIDE COMPOSITION; REGULATORY REGIONS; SELECTION PRESSURES; STOCHASTIC PROCESS; TRANSCRIPTION INITIATION; TRANSLATIONAL REGULATION; UNTRANSLATED REGIONS; UPSTREAM START CODON; ZEBRAFISH;

EID: 84155191308     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/BIBE.2011.32     Document Type: Conference Paper
Times cited : (2)

References (18)
  • 1
    • 0242669945 scopus 로고    scopus 로고
    • Regulation of mRNA translation by 5′- and 3′-UTR-binding factors
    • Apr
    • G. S. Wilkie, et al., "Regulation of mRNA translation by 5′- and 3′-UTR-binding factors," Trends Biochem Sci, vol. 28, pp. 182-8, Apr 2003.
    • (2003) Trends Biochem Sci , vol.28 , pp. 182-188
    • Wilkie, G.S.1
  • 2
    • 60149091189 scopus 로고    scopus 로고
    • Regulation of translation initiation in eukaryotes: Mechanisms and biological targets
    • Feb 20
    • N. Sonenberg and A. G. Hinnebusch, "Regulation of translation initiation in eukaryotes: mechanisms and biological targets," Cell, vol. 136, pp. 731-45, Feb 20 2009.
    • (2009) Cell , vol.136 , pp. 731-745
    • Sonenberg, N.1    Hinnebusch, A.G.2
  • 3
    • 75149196287 scopus 로고    scopus 로고
    • The mechanism of eukaryotic translation initiation and principles of its regulation
    • Feb
    • R. J. Jackson, et al., "The mechanism of eukaryotic translation initiation and principles of its regulation," Nat Rev Mol Cell Biol, vol. 11, pp. 113-27, Feb 2010.
    • (2010) Nat Rev Mol Cell Biol , vol.11 , pp. 113-127
    • Jackson, R.J.1
  • 4
    • 16344362654 scopus 로고    scopus 로고
    • The evolution of transcription-initiation sites
    • M. Lynch, et al., "The evolution of transcription-initiation sites,"Mol Biol Evol, vol. 22, pp. 1137-1146, 2005.
    • (2005) Mol Biol Evol , vol.22 , pp. 1137-1146
    • Lynch, M.1
  • 5
    • 26944478233 scopus 로고    scopus 로고
    • Evolutionary conservation suggests a regulatory function of AUG triplets in 5′-UTRs of eukaryotic genes
    • DOI 10.1093/nar/gki847
    • A. Churbanov, et al., "Evolutionary conservation suggests a regulatory function of AUG triplets in 5′-UTRs of eukaryotic genes,"Nucleic Acids Res, vol. 33, pp. 5512-20, 2005. (Pubitemid 41548817)
    • (2005) Nucleic Acids Research , vol.33 , Issue.17 , pp. 5512-5520
    • Churbanov, A.1    Rogozin, I.B.2    Babenko, V.N.3    Ali, H.4    Koonin, E.V.5
  • 6
    • 65449153694 scopus 로고    scopus 로고
    • Evolution of alternative and constitutive regions of mammalian 5′UTRs
    • A. M. Resch, et al., "Evolution of alternative and constitutive regions of mammalian 5′UTRs," BMC Genomics, vol. 10, p. 162, 2009.
    • (2009) BMC Genomics , vol.10 , pp. 162
    • Resch, A.M.1
  • 7
    • 60349093708 scopus 로고    scopus 로고
    • Fundamental concepts in genetics: Effective population size and patterns of molecular evolution and variation
    • Feb 10
    • B. Charlesworth, "Fundamental concepts in genetics: Effective population size and patterns of molecular evolution and variation,"Nat Rev Genet, Feb 10 2009.
    • (2009) Nat Rev Genet
    • Charlesworth, B.1
  • 8
    • 76749105263 scopus 로고    scopus 로고
    • Evidence for pervasive adaptive protein evolution in wild mice
    • D. L. Halligan, et al., "Evidence for pervasive adaptive protein evolution in wild mice," PLoS Genet, vol. 6, p. e1000825, 2010.
    • (2010) PLoS Genet , vol.6
    • Halligan, D.L.1
  • 9
    • 77954167479 scopus 로고    scopus 로고
    • Evidence that adaptation in Drosophila is not limited by mutation at single sites
    • T. Karasov, et al., "Evidence that adaptation in Drosophila is not limited by mutation at single sites," PLoS Genet, vol. 6, p. e1000924, 2010.
    • (2010) PLoS Genet , vol.6
    • Karasov, T.1
  • 10
    • 9144269670 scopus 로고    scopus 로고
    • EnsMart: A generic system for fast and flexible access to biological data
    • Jan
    • A. Kasprzyk, et al., "EnsMart: a generic system for fast and flexible access to biological data," Genome Res, vol. 14, pp. 160-9, Jan 2004.
    • (2004) Genome Res , vol.14 , pp. 160-169
    • Kasprzyk, A.1
  • 11
    • 0345306751 scopus 로고    scopus 로고
    • The origins of genome complexity
    • Nov 21
    • M. Lynch and J. S. Conery, "The origins of genome complexity,"Science, vol. 302, pp. 1401-4, Nov 21 2003.
    • (2003) Science , vol.302 , pp. 1401-1404
    • Lynch, M.1    Conery, J.S.2
  • 12
    • 66149118241 scopus 로고    scopus 로고
    • Upstream open reading frames cause widespread reduction of protein expression and are polymorphic among humans
    • May 5
    • S. E. Calvo, et al., "Upstream open reading frames cause widespread reduction of protein expression and are polymorphic among humans," Proc Natl Acad Sci U S A, vol. 106, pp. 7507-12, May 5 2009.
    • (2009) Proc Natl Acad Sci U S A , vol.106 , pp. 7507-7512
    • Calvo, S.E.1
  • 13
    • 23044470239 scopus 로고    scopus 로고
    • The role of alternative translation start sites in the generation of human protein diversity
    • Jul
    • A. V. Kochetov, et al., "The role of alternative translation start sites in the generation of human protein diversity," Mol Genet Genomics, vol. 273, pp. 491-6, Jul 2005.
    • (2005) Mol Genet Genomics , vol.273 , pp. 491-496
    • Kochetov, A.V.1
  • 14
    • 27144555357 scopus 로고    scopus 로고
    • Regulation of translation via mRNA structure in prokaryotes and eukaryotes
    • DOI 10.1016/j.gene.2005.06.037, PII S0378111905004348
    • M. Kozak, "Regulation of translation via mRNA structure in prokaryotes and eukaryotes," Gene, vol. 361, pp. 13-37, Nov 21 2005. (Pubitemid 41506931)
    • (2005) Gene , vol.361 , Issue.1-2 , pp. 13-37
    • Kozak, M.1
  • 15
    • 0037121050 scopus 로고    scopus 로고
    • Pushing the limits of the scanning mechanism for initiation of translation
    • DOI 10.1016/S0378-1119(02)01056-9, PII S0378111902010569
    • M. Kozak, "Pushing the limits of the scanning mechanism for initiation of translation," Gene, vol. 299, pp. 1-34, Oct 16 2002. (Pubitemid 35379825)
    • (2002) Gene , vol.299 , Issue.1-2 , pp. 1-34
    • Kozak, M.1
  • 16
    • 0033998935 scopus 로고    scopus 로고
    • Negative and translation termination-dependent positive control of FLI-1 protein synthesis by conserved overlapping 5' upstream open reading frames in Fli-1 mRNA
    • DOI 10.1128/MCB.20.9.2959-2969.2000
    • S. Sarrazin, et al., "Negative and translation termination-dependent positive control of FLI-1 protein synthesis by conserved overlapping 5′ upstream open reading frames in Fli-1 mRNA," Mol Cell Biol, vol. 20, pp. 2959-69, May 2000. (Pubitemid 30215009)
    • (2000) Molecular and Cellular Biology , vol.20 , Issue.9 , pp. 2959-2969
    • Sarrazin, S.1    Starck, J.2    Gonnet, C.3    Doubeikovski, A.4    Melet, F.5    Morle, F.6
  • 17
    • 68949202210 scopus 로고    scopus 로고
    • Differential use of an in-frame translation initiation codon regulates human mu opioid receptor (OPRM1)
    • Sep
    • K. Y. Song, et al., "Differential use of an in-frame translation initiation codon regulates human mu opioid receptor (OPRM1),"Cell Mol Life Sci, vol. 66, pp. 2933-42, Sep 2009.
    • (2009) Cell Mol Life Sci , vol.66 , pp. 2933-2942
    • Song, K.Y.1
  • 18
    • 50949106150 scopus 로고    scopus 로고
    • A test of the null model for 5′ UTR evolution based on GC content
    • May
    • M. Reuter, et al., "A test of the null model for 5′ UTR evolution based on GC content," Mol Biol Evol, vol. 25, pp. 801-4, May 2008.
    • (2008) Mol Biol Evol , vol.25 , pp. 801-804
    • Reuter, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.